data_8G7F # _model_server_result.job_id KyixXbJofqwFrg686EMmwA _model_server_result.datetime_utc '2024-11-15 17:41:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8g7f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":203}' # _entry.id 8G7F # _exptl.entry_id 8G7F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8G7F _cell.length_a 64.2 _cell.length_b 68.273 _cell.length_c 69.85 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8G7F _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N ? 3 I N N ? 3 J N N ? 3 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 7 A HIS 7 1_555 L ZN ZN . B ZN 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc2 A NE2 HIS 66 A HIS 66 1_555 F ZN ZN . A ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc3 A OE1 GLU 115 A GLU 115 1_555 F ZN ZN . A ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.888 ? metalc ? metalc4 C O4 1JJ . A 1JJ 201 1_555 F ZN ZN . A ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.866 ? metalc ? metalc5 F ZN ZN . A ZN 204 1_555 B NE2 HIS 7 B HIS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc6 O O HOH . A HOH 309 2_455 M MG MG . B MG 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc7 O O HOH . A HOH 315 1_555 M MG MG . B MG 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc8 O O HOH . A HOH 336 3_544 N MG MG . B MG 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? metalc ? metalc9 O O HOH . A HOH 394 3_544 N MG MG . B MG 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.89 ? metalc ? metalc10 B NE2 HIS 66 B HIS 66 1_555 L ZN ZN . B ZN 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? metalc ? metalc11 B OE1 GLU 115 B GLU 115 1_555 L ZN ZN . B ZN 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? metalc ? metalc12 H O2 1JJ . B 1JJ 202 1_555 L ZN ZN . B ZN 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.892 ? metalc ? metalc13 M MG MG . B MG 207 1_555 P O HOH . B HOH 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.839 ? metalc ? metalc14 N MG MG . B MG 208 1_555 P O HOH . B HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc15 N MG MG . B MG 208 1_555 P O HOH . B HOH 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc16 N MG MG . B MG 208 1_555 P O HOH . B HOH 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 99 n n C O2 FMT sing 100 n n C H FMT sing 101 n n O2 HO2 FMT sing 102 n n # _atom_sites.entry_id 8G7F _atom_sites.fract_transf_matrix[1][1] 0.015576 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014647 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014316 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1JJ A 1 201 201 1JJ HPP . D 3 FMT A 1 202 202 FMT FMT . E 4 GOL A 1 203 202 GOL GOL . F 5 ZN A 1 204 2 ZN ZN . G 3 FMT B 1 201 203 FMT FMT . H 2 1JJ B 1 202 201 1JJ HPP . I 3 FMT B 1 203 203 FMT FMT . J 3 FMT B 1 204 204 FMT FMT . K 3 FMT B 1 205 205 FMT FMT . L 5 ZN B 1 206 1 ZN ZN . M 6 MG B 1 207 1 MG MG . N 6 MG B 1 208 2 MG MG . O 7 HOH A 1 301 272 HOH HOH . O 7 HOH A 2 302 268 HOH HOH . O 7 HOH A 3 303 136 HOH HOH . O 7 HOH A 4 304 227 HOH HOH . O 7 HOH A 5 305 218 HOH HOH . O 7 HOH A 6 306 157 HOH HOH . O 7 HOH A 7 307 113 HOH HOH . O 7 HOH A 8 308 248 HOH HOH . O 7 HOH A 9 309 196 HOH HOH . O 7 HOH A 10 310 72 HOH HOH . O 7 HOH A 11 311 158 HOH HOH . O 7 HOH A 12 312 104 HOH HOH . O 7 HOH A 13 313 274 HOH HOH . O 7 HOH A 14 314 125 HOH HOH . O 7 HOH A 15 315 197 HOH HOH . O 7 HOH A 16 316 30 HOH HOH . O 7 HOH A 17 317 94 HOH HOH . O 7 HOH A 18 318 189 HOH HOH . O 7 HOH A 19 319 225 HOH HOH . O 7 HOH A 20 320 145 HOH HOH . O 7 HOH A 21 321 37 HOH HOH . O 7 HOH A 22 322 165 HOH HOH . O 7 HOH A 23 323 126 HOH HOH . O 7 HOH A 24 324 26 HOH HOH . O 7 HOH A 25 325 166 HOH HOH . O 7 HOH A 26 326 97 HOH HOH . O 7 HOH A 27 327 59 HOH HOH . O 7 HOH A 28 328 40 HOH HOH . O 7 HOH A 29 329 77 HOH HOH . O 7 HOH A 30 330 64 HOH HOH . O 7 HOH A 31 331 50 HOH HOH . O 7 HOH A 32 332 273 HOH HOH . O 7 HOH A 33 333 38 HOH HOH . O 7 HOH A 34 334 260 HOH HOH . O 7 HOH A 35 335 81 HOH HOH . O 7 HOH A 36 336 200 HOH HOH . O 7 HOH A 37 337 86 HOH HOH . O 7 HOH A 38 338 58 HOH HOH . O 7 HOH A 39 339 8 HOH HOH . O 7 HOH A 40 340 75 HOH HOH . O 7 HOH A 41 341 229 HOH HOH . O 7 HOH A 42 342 210 HOH HOH . O 7 HOH A 43 343 110 HOH HOH . O 7 HOH A 44 344 207 HOH HOH . O 7 HOH A 45 345 118 HOH HOH . O 7 HOH A 46 346 80 HOH HOH . O 7 HOH A 47 347 41 HOH HOH . O 7 HOH A 48 348 95 HOH HOH . O 7 HOH A 49 349 216 HOH HOH . O 7 HOH A 50 350 39 HOH HOH . O 7 HOH A 51 351 9 HOH HOH . O 7 HOH A 52 352 12 HOH HOH . O 7 HOH A 53 353 123 HOH HOH . O 7 HOH A 54 354 56 HOH HOH . O 7 HOH A 55 355 133 HOH HOH . O 7 HOH A 56 356 32 HOH HOH . O 7 HOH A 57 357 57 HOH HOH . O 7 HOH A 58 358 46 HOH HOH . O 7 HOH A 59 359 208 HOH HOH . O 7 HOH A 60 360 31 HOH HOH . O 7 HOH A 61 361 18 HOH HOH . O 7 HOH A 62 362 263 HOH HOH . O 7 HOH A 63 363 101 HOH HOH . O 7 HOH A 64 364 76 HOH HOH . O 7 HOH A 65 365 259 HOH HOH . O 7 HOH A 66 366 42 HOH HOH . O 7 HOH A 67 367 17 HOH HOH . O 7 HOH A 68 368 33 HOH HOH . O 7 HOH A 69 369 156 HOH HOH . O 7 HOH A 70 370 1 HOH HOH . O 7 HOH A 71 371 106 HOH HOH . O 7 HOH A 72 372 168 HOH HOH . O 7 HOH A 73 373 178 HOH HOH . O 7 HOH A 74 374 85 HOH HOH . O 7 HOH A 75 375 237 HOH HOH . O 7 HOH A 76 376 141 HOH HOH . O 7 HOH A 77 377 44 HOH HOH . O 7 HOH A 78 378 194 HOH HOH . O 7 HOH A 79 379 98 HOH HOH . O 7 HOH A 80 380 78 HOH HOH . O 7 HOH A 81 381 257 HOH HOH . O 7 HOH A 82 382 234 HOH HOH . O 7 HOH A 83 383 10 HOH HOH . O 7 HOH A 84 384 241 HOH HOH . O 7 HOH A 85 385 243 HOH HOH . O 7 HOH A 86 386 27 HOH HOH . O 7 HOH A 87 387 233 HOH HOH . O 7 HOH A 88 388 142 HOH HOH . O 7 HOH A 89 389 204 HOH HOH . O 7 HOH A 90 390 159 HOH HOH . O 7 HOH A 91 391 271 HOH HOH . O 7 HOH A 92 392 242 HOH HOH . O 7 HOH A 93 393 250 HOH HOH . O 7 HOH A 94 394 202 HOH HOH . P 7 HOH B 1 301 255 HOH HOH . P 7 HOH B 2 302 215 HOH HOH . P 7 HOH B 3 303 25 HOH HOH . P 7 HOH B 4 304 199 HOH HOH . P 7 HOH B 5 305 213 HOH HOH . P 7 HOH B 6 306 226 HOH HOH . P 7 HOH B 7 307 238 HOH HOH . P 7 HOH B 8 308 195 HOH HOH . P 7 HOH B 9 309 236 HOH HOH . P 7 HOH B 10 310 180 HOH HOH . P 7 HOH B 11 311 89 HOH HOH . P 7 HOH B 12 312 198 HOH HOH . P 7 HOH B 13 313 230 HOH HOH . P 7 HOH B 14 314 102 HOH HOH . P 7 HOH B 15 315 93 HOH HOH . P 7 HOH B 16 316 24 HOH HOH . P 7 HOH B 17 317 68 HOH HOH . P 7 HOH B 18 318 55 HOH HOH . P 7 HOH B 19 319 60 HOH HOH . P 7 HOH B 20 320 116 HOH HOH . P 7 HOH B 21 321 188 HOH HOH . P 7 HOH B 22 322 265 HOH HOH . P 7 HOH B 23 323 185 HOH HOH . P 7 HOH B 24 324 92 HOH HOH . P 7 HOH B 25 325 20 HOH HOH . P 7 HOH B 26 326 219 HOH HOH . P 7 HOH B 27 327 35 HOH HOH . P 7 HOH B 28 328 45 HOH HOH . P 7 HOH B 29 329 115 HOH HOH . P 7 HOH B 30 330 138 HOH HOH . P 7 HOH B 31 331 63 HOH HOH . P 7 HOH B 32 332 153 HOH HOH . P 7 HOH B 33 333 261 HOH HOH . P 7 HOH B 34 334 130 HOH HOH . P 7 HOH B 35 335 190 HOH HOH . P 7 HOH B 36 336 6 HOH HOH . P 7 HOH B 37 337 249 HOH HOH . P 7 HOH B 38 338 240 HOH HOH . P 7 HOH B 39 339 13 HOH HOH . P 7 HOH B 40 340 223 HOH HOH . P 7 HOH B 41 341 5 HOH HOH . P 7 HOH B 42 342 90 HOH HOH . P 7 HOH B 43 343 147 HOH HOH . P 7 HOH B 44 344 253 HOH HOH . P 7 HOH B 45 345 21 HOH HOH . P 7 HOH B 46 346 149 HOH HOH . P 7 HOH B 47 347 111 HOH HOH . P 7 HOH B 48 348 247 HOH HOH . P 7 HOH B 49 349 51 HOH HOH . P 7 HOH B 50 350 100 HOH HOH . P 7 HOH B 51 351 269 HOH HOH . P 7 HOH B 52 352 192 HOH HOH . P 7 HOH B 53 353 228 HOH HOH . P 7 HOH B 54 354 187 HOH HOH . P 7 HOH B 55 355 28 HOH HOH . P 7 HOH B 56 356 2 HOH HOH . P 7 HOH B 57 357 47 HOH HOH . P 7 HOH B 58 358 217 HOH HOH . P 7 HOH B 59 359 129 HOH HOH . P 7 HOH B 60 360 254 HOH HOH . P 7 HOH B 61 361 214 HOH HOH . P 7 HOH B 62 362 34 HOH HOH . P 7 HOH B 63 363 52 HOH HOH . P 7 HOH B 64 364 23 HOH HOH . P 7 HOH B 65 365 244 HOH HOH . P 7 HOH B 66 366 19 HOH HOH . P 7 HOH B 67 367 266 HOH HOH . P 7 HOH B 68 368 224 HOH HOH . P 7 HOH B 69 369 220 HOH HOH . P 7 HOH B 70 370 221 HOH HOH . P 7 HOH B 71 371 73 HOH HOH . P 7 HOH B 72 372 186 HOH HOH . P 7 HOH B 73 373 191 HOH HOH . P 7 HOH B 74 374 143 HOH HOH . P 7 HOH B 75 375 235 HOH HOH . P 7 HOH B 76 376 15 HOH HOH . P 7 HOH B 77 377 99 HOH HOH . P 7 HOH B 78 378 120 HOH HOH . P 7 HOH B 79 379 7 HOH HOH . P 7 HOH B 80 380 140 HOH HOH . P 7 HOH B 81 381 16 HOH HOH . P 7 HOH B 82 382 74 HOH HOH . P 7 HOH B 83 383 62 HOH HOH . P 7 HOH B 84 384 84 HOH HOH . P 7 HOH B 85 385 3 HOH HOH . P 7 HOH B 86 386 65 HOH HOH . P 7 HOH B 87 387 211 HOH HOH . P 7 HOH B 88 388 114 HOH HOH . P 7 HOH B 89 389 262 HOH HOH . P 7 HOH B 90 390 167 HOH HOH . P 7 HOH B 91 391 222 HOH HOH . P 7 HOH B 92 392 209 HOH HOH . P 7 HOH B 93 393 146 HOH HOH . P 7 HOH B 94 394 206 HOH HOH . P 7 HOH B 95 395 70 HOH HOH . P 7 HOH B 96 396 103 HOH HOH . P 7 HOH B 97 397 49 HOH HOH . P 7 HOH B 98 398 201 HOH HOH . P 7 HOH B 99 399 232 HOH HOH . P 7 HOH B 100 400 54 HOH HOH . P 7 HOH B 101 401 128 HOH HOH . P 7 HOH B 102 402 205 HOH HOH . P 7 HOH B 103 403 258 HOH HOH . P 7 HOH B 104 404 246 HOH HOH . P 7 HOH B 105 405 132 HOH HOH . P 7 HOH B 106 406 87 HOH HOH . P 7 HOH B 107 407 11 HOH HOH . P 7 HOH B 108 408 252 HOH HOH . P 7 HOH B 109 409 173 HOH HOH . P 7 HOH B 110 410 175 HOH HOH . P 7 HOH B 111 411 36 HOH HOH . P 7 HOH B 112 412 239 HOH HOH . P 7 HOH B 113 413 256 HOH HOH . P 7 HOH B 114 414 176 HOH HOH . P 7 HOH B 115 415 245 HOH HOH . P 7 HOH B 116 416 270 HOH HOH . P 7 HOH B 117 417 251 HOH HOH . P 7 HOH B 118 418 67 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . I 3 -0.606 -5.555 3.16 1 41.8 ? C FMT 203 B 1 HETATM 2 O O1 FMT . . . I 3 -0.943 -5.943 2.059 1 45.81 ? O1 FMT 203 B 1 HETATM 3 O O2 FMT . . . I 3 -0.774 -4.338 3.596 1 37 ? O2 FMT 203 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 508 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 3 #