data_8G7W
#
_model_server_result.job_id            0wnAAtjn-KpXRBYUuOLexQ 
_model_server_result.datetime_utc      '2024-10-15 11:21:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8g7w 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":3602}' 
#
_entry.id    8G7W 
#
_exptl.entry_id    8G7W 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              743.405 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8G7W 
_cell.length_a            204.48 
_cell.length_b            204.48 
_cell.length_c            251.85 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8G7W 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        98 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 41 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F 1 1 
A,C,D,E,F 1 2 
B,G,H,I,J,K,L 2 1 
B,G,H,I,J,K,L 2 3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_455 y-1/2,x+1/2,-z+1/2 0 1 0 1 0 0 0 0 -1 -102.24 102.24 125.925 
3 'crystal symmetry operation' 16_555 -y+1/2,-x+1/2,-z+1/2 0 -1 0 -1 0 0 0 0 -1 102.24 102.24 125.925 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 G N N 
#
_chem_comp.formula           'C21 H28 N7 O17 P3' 
_chem_comp.formula_weight    743.405 
_chem_comp.id                NAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAP doub 250 n n 
PA O2A NAP sing 251 n n 
PA O5B NAP sing 252 n n 
PA O3 NAP sing 253 n n 
O2A HOA2 NAP sing 254 n n 
O5B C5B NAP sing 255 n n 
C5B C4B NAP sing 256 n n 
C5B H51A NAP sing 257 n n 
C5B H52A NAP sing 258 n n 
C4B O4B NAP sing 259 n n 
C4B C3B NAP sing 260 n n 
C4B H4B NAP sing 261 n n 
O4B C1B NAP sing 262 n n 
C3B O3B NAP sing 263 n n 
C3B C2B NAP sing 264 n n 
C3B H3B NAP sing 265 n n 
O3B HO3A NAP sing 266 n n 
C2B O2B NAP sing 267 n n 
C2B C1B NAP sing 268 n n 
C2B H2B NAP sing 269 n n 
O2B P2B NAP sing 270 n n 
C1B N9A NAP sing 271 n n 
C1B H1B NAP sing 272 n n 
N9A C8A NAP sing 273 n y 
N9A C4A NAP sing 274 n y 
C8A N7A NAP doub 275 n y 
C8A H8A NAP sing 276 n n 
N7A C5A NAP sing 277 n y 
C5A C6A NAP sing 278 n y 
C5A C4A NAP doub 279 n y 
C6A N6A NAP sing 280 n n 
C6A N1A NAP doub 281 n y 
N6A H61A NAP sing 282 n n 
N6A H62A NAP sing 283 n n 
N1A C2A NAP sing 284 n y 
C2A N3A NAP doub 285 n y 
C2A H2A NAP sing 286 n n 
N3A C4A NAP sing 287 n y 
O3 PN NAP sing 288 n n 
PN O1N NAP doub 289 n n 
PN O2N NAP sing 290 n n 
PN O5D NAP sing 291 n n 
O5D C5D NAP sing 292 n n 
C5D C4D NAP sing 293 n n 
C5D H51N NAP sing 294 n n 
C5D H52N NAP sing 295 n n 
C4D O4D NAP sing 296 n n 
C4D C3D NAP sing 297 n n 
C4D H4D NAP sing 298 n n 
O4D C1D NAP sing 299 n n 
C3D O3D NAP sing 300 n n 
C3D C2D NAP sing 301 n n 
C3D H3D NAP sing 302 n n 
O3D HO3N NAP sing 303 n n 
C2D O2D NAP sing 304 n n 
C2D C1D NAP sing 305 n n 
C2D H2D NAP sing 306 n n 
O2D HO2N NAP sing 307 n n 
C1D N1N NAP sing 308 n n 
C1D H1D NAP sing 309 n n 
N1N C2N NAP sing 310 n y 
N1N C6N NAP doub 311 n y 
C2N C3N NAP doub 312 n y 
C2N H2N NAP sing 313 n n 
C3N C7N NAP sing 314 n n 
C3N C4N NAP sing 315 n y 
C7N O7N NAP doub 316 n n 
C7N N7N NAP sing 317 n n 
N7N H71N NAP sing 318 n n 
N7N H72N NAP sing 319 n n 
C4N C5N NAP doub 320 n y 
C4N H4N NAP sing 321 n n 
C5N C6N NAP sing 322 n y 
C5N H5N NAP sing 323 n n 
C6N H6N NAP sing 324 n n 
P2B O1X NAP doub 325 n n 
P2B O2X NAP sing 326 n n 
P2B O3X NAP sing 327 n n 
O2X HOP2 NAP sing 328 n n 
O3X HOP3 NAP sing 329 n n 
#
_atom_sites.entry_id                     8G7W 
_atom_sites.fract_transf_matrix[1][1]    0.00489 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00489 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003971 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAP A 1 3601 3576 NAP NAP . 
D 2 NAP A 1 3602 3675 NAP NAP . 
E 3 SO4 A 1 3603 2 SO4 SO4 . 
F 3 SO4 A 1 3604 5 SO4 SO4 . 
G 2 NAP B 1 3601 3576 NAP NAP . 
H 4 GOL B 1 3602 3675 GOL GOL . 
I 3 SO4 B 1 3603 1 SO4 SO4 . 
J 3 SO4 B 1 3604 3 SO4 SO4 . 
K 3 SO4 B 1 3605 6 SO4 SO4 . 
L 5 HOH B 1 3701 1 HOH HOH . 
L 5 HOH B 2 3702 2 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAP . . . D 2 13.098 6.927 26.324 0.5 100.94 ? PA NAP 3602 A 1 
HETATM 2 O O1A NAP . . . D 2 11.983 6.8 25.319 0.5 100.94 ? O1A NAP 3602 A 1 
HETATM 3 O O2A NAP . . . D 2 14.389 7.281 25.623 0.5 100.94 ? O2A NAP 3602 A 1 
HETATM 4 O O5B NAP . . . D 2 13.264 5.48 27.137 0.5 100.94 ? O5B NAP 3602 A 1 
HETATM 5 C C5B NAP . . . D 2 14.542 5.099 27.622 0.5 100.94 ? C5B NAP 3602 A 1 
HETATM 6 C C4B NAP . . . D 2 15.289 4.216 26.572 0.5 100.94 ? C4B NAP 3602 A 1 
HETATM 7 O O4B NAP . . . D 2 16.565 4.179 26.857 0.5 100.94 ? O4B NAP 3602 A 1 
HETATM 8 C C3B NAP . . . D 2 14.773 2.763 26.633 0.5 100.94 ? C3B NAP 3602 A 1 
HETATM 9 O O3B NAP . . . D 2 14.419 2.386 25.378 0.5 100.94 ? O3B NAP 3602 A 1 
HETATM 10 C C2B NAP . . . D 2 15.96 1.94 27.199 0.5 100.94 ? C2B NAP 3602 A 1 
HETATM 11 O O2B NAP . . . D 2 16.091 0.595 26.546 0.5 100.94 ? O2B NAP 3602 A 1 
HETATM 12 C C1B NAP . . . D 2 17.04 2.632 26.932 0.5 100.94 ? C1B NAP 3602 A 1 
HETATM 13 N N9A NAP . . . D 2 18.13 2.525 27.9 0.5 100.94 ? N9A NAP 3602 A 1 
HETATM 14 C C8A NAP . . . D 2 19.247 3.245 28.064 0.5 100.94 ? C8A NAP 3602 A 1 
HETATM 15 N N7A NAP . . . D 2 19.94 2.76 29.099 0.5 100.94 ? N7A NAP 3602 A 1 
HETATM 16 C C5A NAP . . . D 2 19.26 1.722 29.595 0.5 100.94 ? C5A NAP 3602 A 1 
HETATM 17 C C6A NAP . . . D 2 19.529 0.876 30.654 0.5 100.94 ? C6A NAP 3602 A 1 
HETATM 18 N N6A NAP . . . D 2 20.677 0.894 31.546 0.5 100.94 ? N6A NAP 3602 A 1 
HETATM 19 N N1A NAP . . . D 2 18.688 -0.093 30.953 0.5 100.94 ? N1A NAP 3602 A 1 
HETATM 20 C C2A NAP . . . D 2 17.568 -0.248 30.222 0.5 100.94 ? C2A NAP 3602 A 1 
HETATM 21 N N3A NAP . . . D 2 17.302 0.57 29.19 0.5 100.94 ? N3A NAP 3602 A 1 
HETATM 22 C C4A NAP . . . D 2 18.142 1.569 28.861 0.5 100.94 ? C4A NAP 3602 A 1 
HETATM 23 O O3 NAP . . . D 2 12.66 8.151 27.363 0.5 100.94 ? O3 NAP 3602 A 1 
HETATM 24 P PN NAP . . . D 2 12.114 9.631 26.814 0.5 100.94 ? PN NAP 3602 A 1 
HETATM 25 O O1N NAP . . . D 2 10.959 10.1 27.668 0.5 100.94 ? O1N NAP 3602 A 1 
HETATM 26 O O2N NAP . . . D 2 11.66 9.529 25.374 0.5 100.94 ? O2N NAP 3602 A 1 
HETATM 27 O O5D NAP . . . D 2 13.368 10.726 26.886 0.5 100.94 ? O5D NAP 3602 A 1 
HETATM 28 C C5D NAP . . . D 2 13.979 11.084 25.657 0.5 100.94 ? C5D NAP 3602 A 1 
HETATM 29 C C4D NAP . . . D 2 15.435 10.53 25.567 0.5 100.94 ? C4D NAP 3602 A 1 
HETATM 30 O O4D NAP . . . D 2 16.084 11.088 24.576 0.5 100.94 ? O4D NAP 3602 A 1 
HETATM 31 C C3D NAP . . . D 2 16.212 10.922 26.827 0.5 100.94 ? C3D NAP 3602 A 1 
HETATM 32 O O3D NAP . . . D 2 17.117 9.969 27.156 0.5 100.94 ? O3D NAP 3602 A 1 
HETATM 33 C C2D NAP . . . D 2 16.921 12.236 26.461 0.5 100.94 ? C2D NAP 3602 A 1 
HETATM 34 O O2D NAP . . . D 2 18.171 12.387 27.271 0.5 100.94 ? O2D NAP 3602 A 1 
HETATM 35 C C1D NAP . . . D 2 17.193 12.099 25.194 0.5 100.94 ? C1D NAP 3602 A 1 
HETATM 36 N N1N NAP . . . D 2 17.085 13.372 24.519 0.5 100.94 ? N1N NAP 3602 A 1 
HETATM 37 C C2N NAP . . . D 2 17.408 14.525 25.157 0.5 100.94 ? C2N NAP 3602 A 1 
HETATM 38 C C3N NAP . . . D 2 17.288 15.737 24.494 0.5 100.94 ? C3N NAP 3602 A 1 
HETATM 39 C C7N NAP . . . D 2 17.656 17.035 25.219 0.5 100.94 ? C7N NAP 3602 A 1 
HETATM 40 O O7N NAP . . . D 2 18.579 17.049 25.956 0.5 100.94 ? O7N NAP 3602 A 1 
HETATM 41 N N7N NAP . . . D 2 16.871 18.239 25.001 0.5 100.94 ? N7N NAP 3602 A 1 
HETATM 42 C C4N NAP . . . D 2 16.854 15.768 23.209 0.5 100.94 ? C4N NAP 3602 A 1 
HETATM 43 C C5N NAP . . . D 2 16.531 14.613 22.572 0.5 100.94 ? C5N NAP 3602 A 1 
HETATM 44 C C6N NAP . . . D 2 16.649 13.404 23.238 0.5 100.94 ? C6N NAP 3602 A 1 
HETATM 45 P P2B NAP . . . D 2 14.792 -0.401 26.362 0.5 100.94 ? P2B NAP 3602 A 1 
HETATM 46 O O1X NAP . . . D 2 14.156 -0.122 25.025 0.5 100.94 ? O1X NAP 3602 A 1 
HETATM 47 O O2X NAP . . . D 2 15.297 -1.824 26.397 0.5 100.94 ? O2X NAP 3602 A 1 
HETATM 48 O O3X NAP . . . D 2 13.777 -0.159 27.454 0.5 100.94 ? O3X NAP 3602 A 1 
#
_model_server_stats.io_time_ms              79 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           48 
#