data_8G8A
#
_model_server_result.job_id            4sJPHatTuru2p24sDlba1Q 
_model_server_result.datetime_utc      '2024-10-11 05:29:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8g8a 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":301}' 
#
_entry.id    8G8A 
#
_exptl.entry_id    8G8A 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          101.06 
_cell.angle_gamma         90 
_cell.entry_id            8G8A 
_cell.length_a            164.976 
_cell.length_b            63.84 
_cell.length_c            111.971 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8G8A 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? trimeric 3 author_defined_assembly 1 
? trimeric 3 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,G,M,N 1 1 
C,D,F,H,I,J,K,L,O,P 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 I N N 
? 5 J N N 
? 5 K N N 
? 5 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 96 A CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf2 A SG CYS 149 A CYS 140 1_555 A SG CYS 205 A CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf3 B SG CYS 23 B CYS 23 1_555 B SG CYS 88 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf4 B SG CYS 136 B CYS 134 1_555 B SG CYS 196 B CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf5 C SG CYS 22 H CYS 22 1_555 C SG CYS 96 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? 
disulf ? disulf6 C SG CYS 149 H CYS 140 1_555 C SG CYS 205 H CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf7 D SG CYS 23 L CYS 23 1_555 D SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf8 D SG CYS 136 L CYS 134 1_555 D SG CYS 196 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
covale ? covale1 C ND2 ASN 77 H ASN 76 1_555 H C1 NAG . H NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? 
metalc ? metalc1 C O TYR 107 H TYR 100 1_555 I NA NA . L NA 301 1_555 C ? ? ? ? ? ? ? ? ? ? ? 2.952 ? 
metalc ? metalc2 D OH TYR 36 L TYR 36 1_555 I NA NA . L NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? 
metalc ? metalc3 D O PRO 80 L PRO 80 1_555 K NA NA . L NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.803 ? 
metalc ? metalc4 D OE1 GLN 89 L GLN 89 1_555 I NA NA . L NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.114 ? 
metalc ? metalc5 D O ASP 169 L ASP 167 1_555 K NA NA . L NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.721 ? 
metalc ? metalc6 D OG SER 173 L SER 171 1_555 K NA NA . L NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? 
metalc ? metalc7 D O THR 174 L THR 172 1_555 J NA NA . L NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.163 ? 
metalc ? metalc8 D OG1 THR 182 L THR 180 1_555 L NA NA . L NA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.667 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8G8A 
_atom_sites.fract_transf_matrix[1][1]    0.006061 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001185 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015664 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.0091 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 NAG A 1 301 215 NAG NAG . 
H 4 NAG H 1 301 217 NAG NAG . 
I 5 NA L 1 301 1 NA NA . 
J 5 NA L 1 302 2 NA NA . 
K 5 NA L 1 303 3 NA NA . 
L 5 NA L 1 304 5 NA NA . 
M 6 HOH A 1 401 33 HOH HOH . 
M 6 HOH A 2 402 13 HOH HOH . 
M 6 HOH A 3 403 21 HOH HOH . 
M 6 HOH A 4 404 40 HOH HOH . 
M 6 HOH A 5 405 32 HOH HOH . 
M 6 HOH A 6 406 34 HOH HOH . 
M 6 HOH A 7 407 27 HOH HOH . 
N 6 HOH B 1 301 20 HOH HOH . 
N 6 HOH B 2 302 30 HOH HOH . 
N 6 HOH B 3 303 1 HOH HOH . 
O 6 HOH H 1 401 36 HOH HOH . 
O 6 HOH H 2 402 3 HOH HOH . 
O 6 HOH H 3 403 23 HOH HOH . 
O 6 HOH H 4 404 43 HOH HOH . 
O 6 HOH H 5 405 2 HOH HOH . 
O 6 HOH H 6 406 38 HOH HOH . 
O 6 HOH H 7 407 17 HOH HOH . 
O 6 HOH H 8 408 10 HOH HOH . 
O 6 HOH H 9 409 12 HOH HOH . 
O 6 HOH H 10 410 29 HOH HOH . 
O 6 HOH H 11 411 7 HOH HOH . 
O 6 HOH H 12 412 42 HOH HOH . 
P 6 HOH L 1 401 19 HOH HOH . 
P 6 HOH L 2 402 24 HOH HOH . 
P 6 HOH L 3 403 37 HOH HOH . 
P 6 HOH L 4 404 41 HOH HOH . 
P 6 HOH L 5 405 28 HOH HOH . 
P 6 HOH L 6 406 8 HOH HOH . 
P 6 HOH L 7 407 18 HOH HOH . 
P 6 HOH L 8 408 26 HOH HOH . 
P 6 HOH L 9 409 31 HOH HOH . 
P 6 HOH L 10 410 25 HOH HOH . 
P 6 HOH L 11 411 15 HOH HOH . 
P 6 HOH L 12 412 16 HOH HOH . 
P 6 HOH L 13 413 4 HOH HOH . 
P 6 HOH L 14 414 22 HOH HOH . 
P 6 HOH L 15 415 14 HOH HOH . 
P 6 HOH L 16 416 6 HOH HOH . 
P 6 HOH L 17 417 11 HOH HOH . 
P 6 HOH L 18 418 35 HOH HOH . 
P 6 HOH L 19 419 9 HOH HOH . 
P 6 HOH L 20 420 5 HOH HOH . 
P 6 HOH L 21 421 39 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         I 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               18.071 
_atom_site.Cartn_y               11.048 
_atom_site.Cartn_z               14.457 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        68.38 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           301 
_atom_site.auth_asym_id          L 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#