data_8G91 # _model_server_result.job_id p2eJM4x3zBfG2xYcEIxcrA _model_server_result.datetime_utc '2024-11-14 10:44:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8g91 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 8G91 # _exptl.entry_id 8G91 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8G91 _cell.length_a 53.781 _cell.length_b 53.781 _cell.length_c 90.452 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8G91 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id O3' _struct_conn.ptnr1_label_comp_id A _struct_conn.ptnr1_label_seq_id 5 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id A _struct_conn.ptnr1_auth_seq_id -2 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id P _struct_conn.ptnr2_label_comp_id SRA _struct_conn.ptnr2_label_seq_id 6 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id SRA _struct_conn.ptnr2_auth_seq_id -1 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.562 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 155 n n C1 C2 GOL sing 156 n n C1 H11 GOL sing 157 n n C1 H12 GOL sing 158 n n O1 HO1 GOL sing 159 n n C2 O2 GOL sing 160 n n C2 C3 GOL sing 161 n n C2 H2 GOL sing 162 n n O2 HO2 GOL sing 163 n n C3 O3 GOL sing 164 n n C3 H31 GOL sing 165 n n C3 H32 GOL sing 166 n n O3 HO3 GOL sing 167 n n # _atom_sites.entry_id 8G91 _atom_sites.fract_transf_matrix[1][1] 0.018594 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018594 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011056 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL A 1 501 1 GOL GOL . D 4 HOH A 1 601 71 HOH HOH . D 4 HOH A 2 602 90 HOH HOH . D 4 HOH A 3 603 97 HOH HOH . D 4 HOH A 4 604 63 HOH HOH . D 4 HOH A 5 605 19 HOH HOH . D 4 HOH A 6 606 83 HOH HOH . D 4 HOH A 7 607 98 HOH HOH . D 4 HOH A 8 608 66 HOH HOH . D 4 HOH A 9 609 57 HOH HOH . D 4 HOH A 10 610 32 HOH HOH . D 4 HOH A 11 611 42 HOH HOH . D 4 HOH A 12 612 81 HOH HOH . D 4 HOH A 13 613 87 HOH HOH . D 4 HOH A 14 614 37 HOH HOH . D 4 HOH A 15 615 101 HOH HOH . D 4 HOH A 16 616 15 HOH HOH . D 4 HOH A 17 617 27 HOH HOH . D 4 HOH A 18 618 35 HOH HOH . D 4 HOH A 19 619 9 HOH HOH . D 4 HOH A 20 620 3 HOH HOH . D 4 HOH A 21 621 40 HOH HOH . D 4 HOH A 22 622 24 HOH HOH . D 4 HOH A 23 623 21 HOH HOH . D 4 HOH A 24 624 10 HOH HOH . D 4 HOH A 25 625 11 HOH HOH . D 4 HOH A 26 626 65 HOH HOH . D 4 HOH A 27 627 4 HOH HOH . D 4 HOH A 28 628 84 HOH HOH . D 4 HOH A 29 629 1 HOH HOH . D 4 HOH A 30 630 76 HOH HOH . D 4 HOH A 31 631 30 HOH HOH . D 4 HOH A 32 632 29 HOH HOH . D 4 HOH A 33 633 72 HOH HOH . D 4 HOH A 34 634 102 HOH HOH . D 4 HOH A 35 635 69 HOH HOH . D 4 HOH A 36 636 48 HOH HOH . D 4 HOH A 37 637 56 HOH HOH . D 4 HOH A 38 638 108 HOH HOH . D 4 HOH A 39 639 50 HOH HOH . D 4 HOH A 40 640 34 HOH HOH . D 4 HOH A 41 641 23 HOH HOH . D 4 HOH A 42 642 91 HOH HOH . D 4 HOH A 43 643 5 HOH HOH . D 4 HOH A 44 644 25 HOH HOH . D 4 HOH A 45 645 7 HOH HOH . D 4 HOH A 46 646 105 HOH HOH . D 4 HOH A 47 647 54 HOH HOH . D 4 HOH A 48 648 31 HOH HOH . D 4 HOH A 49 649 16 HOH HOH . D 4 HOH A 50 650 85 HOH HOH . D 4 HOH A 51 651 13 HOH HOH . D 4 HOH A 52 652 6 HOH HOH . D 4 HOH A 53 653 53 HOH HOH . D 4 HOH A 54 654 12 HOH HOH . D 4 HOH A 55 655 38 HOH HOH . D 4 HOH A 56 656 99 HOH HOH . D 4 HOH A 57 657 100 HOH HOH . D 4 HOH A 58 658 2 HOH HOH . D 4 HOH A 59 659 41 HOH HOH . D 4 HOH A 60 660 8 HOH HOH . D 4 HOH A 61 661 44 HOH HOH . D 4 HOH A 62 662 103 HOH HOH . D 4 HOH A 63 663 55 HOH HOH . D 4 HOH A 64 664 17 HOH HOH . D 4 HOH A 65 665 33 HOH HOH . D 4 HOH A 66 666 39 HOH HOH . D 4 HOH A 67 667 62 HOH HOH . D 4 HOH A 68 668 109 HOH HOH . D 4 HOH A 69 669 60 HOH HOH . D 4 HOH A 70 670 43 HOH HOH . D 4 HOH A 71 671 73 HOH HOH . D 4 HOH A 72 672 22 HOH HOH . D 4 HOH A 73 673 95 HOH HOH . D 4 HOH A 74 674 104 HOH HOH . D 4 HOH A 75 675 78 HOH HOH . D 4 HOH A 76 676 47 HOH HOH . D 4 HOH A 77 677 80 HOH HOH . D 4 HOH A 78 678 68 HOH HOH . D 4 HOH A 79 679 70 HOH HOH . D 4 HOH A 80 680 18 HOH HOH . D 4 HOH A 81 681 64 HOH HOH . D 4 HOH A 82 682 51 HOH HOH . D 4 HOH A 83 683 79 HOH HOH . D 4 HOH A 84 684 77 HOH HOH . D 4 HOH A 85 685 74 HOH HOH . D 4 HOH A 86 686 96 HOH HOH . D 4 HOH A 87 687 61 HOH HOH . D 4 HOH A 88 688 94 HOH HOH . D 4 HOH A 89 689 26 HOH HOH . D 4 HOH A 90 690 14 HOH HOH . D 4 HOH A 91 691 86 HOH HOH . D 4 HOH A 92 692 20 HOH HOH . D 4 HOH A 93 693 36 HOH HOH . D 4 HOH A 94 694 89 HOH HOH . D 4 HOH A 95 695 28 HOH HOH . D 4 HOH A 96 696 75 HOH HOH . D 4 HOH A 97 697 52 HOH HOH . E 4 HOH B 1 101 92 HOH HOH . E 4 HOH B 2 102 58 HOH HOH . E 4 HOH B 3 103 107 HOH HOH . E 4 HOH B 4 104 106 HOH HOH . E 4 HOH B 5 105 45 HOH HOH . E 4 HOH B 6 106 88 HOH HOH . E 4 HOH B 7 107 67 HOH HOH . E 4 HOH B 8 108 46 HOH HOH . E 4 HOH B 9 109 93 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 -31.203 1.84 -19.257 1 44.53 ? C1 GOL 501 A 1 HETATM 2 O O1 GOL . . . C 3 -31.364 2.23 -17.926 1 30.68 ? O1 GOL 501 A 1 HETATM 3 C C2 GOL . . . C 3 -30.476 0.463 -19.268 1 37.11 ? C2 GOL 501 A 1 HETATM 4 O O2 GOL . . . C 3 -29.529 0.352 -18.251 1 22.54 ? O2 GOL 501 A 1 HETATM 5 C C3 GOL . . . C 3 -31.604 -0.593 -19.156 1 35.69 ? C3 GOL 501 A 1 HETATM 6 O O3 GOL . . . C 3 -31.136 -1.753 -19.777 1 34.56 ? O3 GOL 501 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 6 #