data_8G9C # _model_server_result.job_id uQXKTkHRLGE1WPldAlhU7Q _model_server_result.datetime_utc '2024-11-17 14:39:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8g9c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 8G9C # _exptl.entry_id 8G9C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8G9C _cell.length_a 46.752 _cell.length_b 59.639 _cell.length_c 62.409 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8G9C _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 50 A GLY 50 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc2 A OE2 GLU 66 A GLU 66 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc3 A OE1 GLU 66 A GLU 66 1_555 E MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc4 A OE1 GLU 70 A GLU 70 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc5 A OE1 GLU 70 A GLU 70 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc6 B O23 YUT . A YUT 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.732 ? metalc ? metalc7 B O22 YUT . A YUT 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc8 B O32 YUT . A YUT 401 1_555 F MG MG . A MG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc9 C MG MG . A MG 402 1_555 J O HOH . A HOH 517 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.94 ? metalc ? metalc10 C MG MG . A MG 402 1_555 J O HOH . A HOH 558 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.908 ? metalc ? metalc11 D MG MG . A MG 403 1_555 J O HOH . A HOH 517 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? metalc ? metalc12 D MG MG . A MG 403 1_555 J O HOH . A HOH 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc13 D MG MG . A MG 403 1_555 J O HOH . A HOH 569 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc14 E MG MG . A MG 404 1_555 J O HOH . A HOH 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc15 E MG MG . A MG 404 1_555 J O HOH . A HOH 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc16 E MG MG . A MG 404 1_555 J O HOH . A HOH 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc17 E MG MG . A MG 404 1_555 J O HOH . A HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc18 F MG MG . A MG 405 1_555 J O HOH . A HOH 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc19 F MG MG . A MG 405 1_555 J O HOH . A HOH 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc20 F MG MG . A MG 405 1_555 J O HOH . A HOH 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc21 F MG MG . A MG 405 1_555 J O HOH . A HOH 517 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8G9C _atom_sites.fract_transf_matrix[1][1] 0.021389 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016768 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016023 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 YUT A 1 401 401 YUT ZFK . C 3 MG A 1 402 501 MG MG . D 3 MG A 1 403 502 MG MG . E 3 MG A 1 404 503 MG MG . F 3 MG A 1 405 504 MG MG . G 4 CL A 1 406 601 CL CL . H 4 CL A 1 407 602 CL CL . I 5 F A 1 408 801 F F . J 6 HOH A 1 501 109 HOH HOH . J 6 HOH A 2 502 51 HOH HOH . J 6 HOH A 3 503 29 HOH HOH . J 6 HOH A 4 504 58 HOH HOH . J 6 HOH A 5 505 60 HOH HOH . J 6 HOH A 6 506 101 HOH HOH . J 6 HOH A 7 507 95 HOH HOH . J 6 HOH A 8 508 8 HOH HOH . J 6 HOH A 9 509 94 HOH HOH . J 6 HOH A 10 510 74 HOH HOH . J 6 HOH A 11 511 25 HOH HOH . J 6 HOH A 12 512 93 HOH HOH . J 6 HOH A 13 513 87 HOH HOH . J 6 HOH A 14 514 90 HOH HOH . J 6 HOH A 15 515 70 HOH HOH . J 6 HOH A 16 516 77 HOH HOH . J 6 HOH A 17 517 92 HOH HOH . J 6 HOH A 18 518 64 HOH HOH . J 6 HOH A 19 519 32 HOH HOH . J 6 HOH A 20 520 45 HOH HOH . J 6 HOH A 21 521 86 HOH HOH . J 6 HOH A 22 522 23 HOH HOH . J 6 HOH A 23 523 5 HOH HOH . J 6 HOH A 24 524 63 HOH HOH . J 6 HOH A 25 525 82 HOH HOH . J 6 HOH A 26 526 14 HOH HOH . J 6 HOH A 27 527 21 HOH HOH . J 6 HOH A 28 528 65 HOH HOH . J 6 HOH A 29 529 1 HOH HOH . J 6 HOH A 30 530 3 HOH HOH . J 6 HOH A 31 531 52 HOH HOH . J 6 HOH A 32 532 80 HOH HOH . J 6 HOH A 33 533 79 HOH HOH . J 6 HOH A 34 534 19 HOH HOH . J 6 HOH A 35 535 11 HOH HOH . J 6 HOH A 36 536 105 HOH HOH . J 6 HOH A 37 537 6 HOH HOH . J 6 HOH A 38 538 48 HOH HOH . J 6 HOH A 39 539 20 HOH HOH . J 6 HOH A 40 540 81 HOH HOH . J 6 HOH A 41 541 68 HOH HOH . J 6 HOH A 42 542 88 HOH HOH . J 6 HOH A 43 543 99 HOH HOH . J 6 HOH A 44 544 59 HOH HOH . J 6 HOH A 45 545 37 HOH HOH . J 6 HOH A 46 546 44 HOH HOH . J 6 HOH A 47 547 49 HOH HOH . J 6 HOH A 48 548 22 HOH HOH . J 6 HOH A 49 549 28 HOH HOH . J 6 HOH A 50 550 47 HOH HOH . J 6 HOH A 51 551 67 HOH HOH . J 6 HOH A 52 552 2 HOH HOH . J 6 HOH A 53 553 4 HOH HOH . J 6 HOH A 54 554 43 HOH HOH . J 6 HOH A 55 555 9 HOH HOH . J 6 HOH A 56 556 36 HOH HOH . J 6 HOH A 57 557 62 HOH HOH . J 6 HOH A 58 558 84 HOH HOH . J 6 HOH A 59 559 46 HOH HOH . J 6 HOH A 60 560 15 HOH HOH . J 6 HOH A 61 561 17 HOH HOH . J 6 HOH A 62 562 61 HOH HOH . J 6 HOH A 63 563 69 HOH HOH . J 6 HOH A 64 564 10 HOH HOH . J 6 HOH A 65 565 107 HOH HOH . J 6 HOH A 66 566 16 HOH HOH . J 6 HOH A 67 567 12 HOH HOH . J 6 HOH A 68 568 71 HOH HOH . J 6 HOH A 69 569 85 HOH HOH . J 6 HOH A 70 570 55 HOH HOH . J 6 HOH A 71 571 110 HOH HOH . J 6 HOH A 72 572 54 HOH HOH . J 6 HOH A 73 573 27 HOH HOH . J 6 HOH A 74 574 7 HOH HOH . J 6 HOH A 75 575 26 HOH HOH . J 6 HOH A 76 576 35 HOH HOH . J 6 HOH A 77 577 42 HOH HOH . J 6 HOH A 78 578 104 HOH HOH . J 6 HOH A 79 579 13 HOH HOH . J 6 HOH A 80 580 98 HOH HOH . J 6 HOH A 81 581 24 HOH HOH . J 6 HOH A 82 582 18 HOH HOH . J 6 HOH A 83 583 83 HOH HOH . J 6 HOH A 84 584 89 HOH HOH . J 6 HOH A 85 585 30 HOH HOH . J 6 HOH A 86 586 73 HOH HOH . J 6 HOH A 87 587 57 HOH HOH . J 6 HOH A 88 588 103 HOH HOH . J 6 HOH A 89 589 72 HOH HOH . J 6 HOH A 90 590 76 HOH HOH . J 6 HOH A 91 591 66 HOH HOH . J 6 HOH A 92 592 38 HOH HOH . J 6 HOH A 93 593 102 HOH HOH . J 6 HOH A 94 594 106 HOH HOH . J 6 HOH A 95 595 39 HOH HOH . J 6 HOH A 96 596 91 HOH HOH . J 6 HOH A 97 597 41 HOH HOH . J 6 HOH A 98 598 40 HOH HOH . J 6 HOH A 99 599 111 HOH HOH . J 6 HOH A 100 600 96 HOH HOH . J 6 HOH A 101 601 97 HOH HOH . J 6 HOH A 102 602 100 HOH HOH . J 6 HOH A 103 603 108 HOH HOH . J 6 HOH A 104 604 75 HOH HOH . J 6 HOH A 105 605 34 HOH HOH . J 6 HOH A 106 606 31 HOH HOH . J 6 HOH A 107 607 78 HOH HOH . J 6 HOH A 108 608 53 HOH HOH . J 6 HOH A 109 609 50 HOH HOH . J 6 HOH A 110 610 56 HOH HOH . J 6 HOH A 111 611 33 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 12.629 _atom_site.Cartn_y 10.878 _atom_site.Cartn_z 18.506 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 28.4 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #