data_8GA2
#
_model_server_result.job_id            DAZh6wLfnNM4-mlLx-yXow 
_model_server_result.datetime_utc      '2024-12-18 13:09:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ga2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1201}' 
#
_entry.id    8GA2 
#
_exptl.entry_id    8GA2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          113.98 
_cell.angle_gamma         90 
_cell.entry_id            8GA2 
_cell.length_a            45.86 
_cell.length_b            107.01 
_cell.length_c            55.83 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8GA2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,J 1 1 
B,G,K 2 1 
C,H,L 3 1 
D,I,M 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     8GA2 
_atom_sites.fract_transf_matrix[1][1]    0.021805 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.009699 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009345 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019604 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 EDO A 1 1201 1201 EDO EDO . 
F 3 YVK A 1 1202 1 YVK LIG . 
G 3 YVK D 1 1201 4 YVK LIG . 
H 3 YVK C 1 1201 3 YVK LIG . 
I 3 YVK B 1 1201 2 YVK LIG . 
J 4 HOH A 1 1301 79 HOH HOH . 
J 4 HOH A 2 1302 150 HOH HOH . 
J 4 HOH A 3 1303 191 HOH HOH . 
J 4 HOH A 4 1304 133 HOH HOH . 
J 4 HOH A 5 1305 130 HOH HOH . 
J 4 HOH A 6 1306 175 HOH HOH . 
J 4 HOH A 7 1307 17 HOH HOH . 
J 4 HOH A 8 1308 153 HOH HOH . 
J 4 HOH A 9 1309 143 HOH HOH . 
J 4 HOH A 10 1310 39 HOH HOH . 
J 4 HOH A 11 1311 48 HOH HOH . 
J 4 HOH A 12 1312 168 HOH HOH . 
J 4 HOH A 13 1313 95 HOH HOH . 
J 4 HOH A 14 1314 71 HOH HOH . 
J 4 HOH A 15 1315 53 HOH HOH . 
J 4 HOH A 16 1316 127 HOH HOH . 
J 4 HOH A 17 1317 66 HOH HOH . 
J 4 HOH A 18 1318 96 HOH HOH . 
J 4 HOH A 19 1319 10 HOH HOH . 
J 4 HOH A 20 1320 31 HOH HOH . 
J 4 HOH A 21 1321 86 HOH HOH . 
J 4 HOH A 22 1322 78 HOH HOH . 
J 4 HOH A 23 1323 140 HOH HOH . 
J 4 HOH A 24 1324 2 HOH HOH . 
J 4 HOH A 25 1325 116 HOH HOH . 
J 4 HOH A 26 1326 137 HOH HOH . 
J 4 HOH A 27 1327 59 HOH HOH . 
J 4 HOH A 28 1328 28 HOH HOH . 
J 4 HOH A 29 1329 136 HOH HOH . 
J 4 HOH A 30 1330 169 HOH HOH . 
J 4 HOH A 31 1331 109 HOH HOH . 
J 4 HOH A 32 1332 4 HOH HOH . 
J 4 HOH A 33 1333 111 HOH HOH . 
J 4 HOH A 34 1334 50 HOH HOH . 
J 4 HOH A 35 1335 167 HOH HOH . 
J 4 HOH A 36 1336 123 HOH HOH . 
J 4 HOH A 37 1337 54 HOH HOH . 
J 4 HOH A 38 1338 77 HOH HOH . 
J 4 HOH A 39 1339 171 HOH HOH . 
J 4 HOH A 40 1340 56 HOH HOH . 
J 4 HOH A 41 1341 6 HOH HOH . 
J 4 HOH A 42 1342 69 HOH HOH . 
J 4 HOH A 43 1343 188 HOH HOH . 
J 4 HOH A 44 1344 65 HOH HOH . 
J 4 HOH A 45 1345 165 HOH HOH . 
J 4 HOH A 46 1346 108 HOH HOH . 
J 4 HOH A 47 1347 74 HOH HOH . 
J 4 HOH A 48 1348 102 HOH HOH . 
J 4 HOH A 49 1349 166 HOH HOH . 
J 4 HOH A 50 1350 90 HOH HOH . 
J 4 HOH A 51 1351 154 HOH HOH . 
K 4 HOH D 1 1301 41 HOH HOH . 
K 4 HOH D 2 1302 163 HOH HOH . 
K 4 HOH D 3 1303 113 HOH HOH . 
K 4 HOH D 4 1304 99 HOH HOH . 
K 4 HOH D 5 1305 158 HOH HOH . 
K 4 HOH D 6 1306 35 HOH HOH . 
K 4 HOH D 7 1307 156 HOH HOH . 
K 4 HOH D 8 1308 82 HOH HOH . 
K 4 HOH D 9 1309 110 HOH HOH . 
K 4 HOH D 10 1310 183 HOH HOH . 
K 4 HOH D 11 1311 84 HOH HOH . 
K 4 HOH D 12 1312 112 HOH HOH . 
K 4 HOH D 13 1313 144 HOH HOH . 
K 4 HOH D 14 1314 73 HOH HOH . 
K 4 HOH D 15 1315 88 HOH HOH . 
K 4 HOH D 16 1316 101 HOH HOH . 
K 4 HOH D 17 1317 61 HOH HOH . 
K 4 HOH D 18 1318 155 HOH HOH . 
K 4 HOH D 19 1319 7 HOH HOH . 
K 4 HOH D 20 1320 80 HOH HOH . 
K 4 HOH D 21 1321 72 HOH HOH . 
K 4 HOH D 22 1322 119 HOH HOH . 
K 4 HOH D 23 1323 52 HOH HOH . 
K 4 HOH D 24 1324 49 HOH HOH . 
K 4 HOH D 25 1325 68 HOH HOH . 
K 4 HOH D 26 1326 12 HOH HOH . 
K 4 HOH D 27 1327 120 HOH HOH . 
K 4 HOH D 28 1328 57 HOH HOH . 
K 4 HOH D 29 1329 145 HOH HOH . 
K 4 HOH D 30 1330 1 HOH HOH . 
K 4 HOH D 31 1331 184 HOH HOH . 
K 4 HOH D 32 1332 36 HOH HOH . 
K 4 HOH D 33 1333 62 HOH HOH . 
K 4 HOH D 34 1334 187 HOH HOH . 
K 4 HOH D 35 1335 33 HOH HOH . 
K 4 HOH D 36 1336 190 HOH HOH . 
K 4 HOH D 37 1337 11 HOH HOH . 
K 4 HOH D 38 1338 94 HOH HOH . 
K 4 HOH D 39 1339 93 HOH HOH . 
K 4 HOH D 40 1340 43 HOH HOH . 
K 4 HOH D 41 1341 138 HOH HOH . 
K 4 HOH D 42 1342 141 HOH HOH . 
K 4 HOH D 43 1343 98 HOH HOH . 
K 4 HOH D 44 1344 8 HOH HOH . 
K 4 HOH D 45 1345 107 HOH HOH . 
K 4 HOH D 46 1346 139 HOH HOH . 
K 4 HOH D 47 1347 129 HOH HOH . 
K 4 HOH D 48 1348 104 HOH HOH . 
K 4 HOH D 49 1349 172 HOH HOH . 
K 4 HOH D 50 1350 115 HOH HOH . 
K 4 HOH D 51 1351 100 HOH HOH . 
K 4 HOH D 52 1352 70 HOH HOH . 
K 4 HOH D 53 1353 125 HOH HOH . 
K 4 HOH D 54 1354 32 HOH HOH . 
K 4 HOH D 55 1355 164 HOH HOH . 
K 4 HOH D 56 1356 97 HOH HOH . 
L 4 HOH C 1 1301 15 HOH HOH . 
L 4 HOH C 2 1302 76 HOH HOH . 
L 4 HOH C 3 1303 18 HOH HOH . 
L 4 HOH C 4 1304 24 HOH HOH . 
L 4 HOH C 5 1305 87 HOH HOH . 
L 4 HOH C 6 1306 106 HOH HOH . 
L 4 HOH C 7 1307 124 HOH HOH . 
L 4 HOH C 8 1308 21 HOH HOH . 
L 4 HOH C 9 1309 179 HOH HOH . 
L 4 HOH C 10 1310 26 HOH HOH . 
L 4 HOH C 11 1311 13 HOH HOH . 
L 4 HOH C 12 1312 83 HOH HOH . 
L 4 HOH C 13 1313 64 HOH HOH . 
L 4 HOH C 14 1314 16 HOH HOH . 
L 4 HOH C 15 1315 170 HOH HOH . 
L 4 HOH C 16 1316 91 HOH HOH . 
L 4 HOH C 17 1317 178 HOH HOH . 
L 4 HOH C 18 1318 152 HOH HOH . 
L 4 HOH C 19 1319 38 HOH HOH . 
L 4 HOH C 20 1320 14 HOH HOH . 
L 4 HOH C 21 1321 9 HOH HOH . 
L 4 HOH C 22 1322 19 HOH HOH . 
L 4 HOH C 23 1323 30 HOH HOH . 
L 4 HOH C 24 1324 55 HOH HOH . 
L 4 HOH C 25 1325 81 HOH HOH . 
L 4 HOH C 26 1326 45 HOH HOH . 
L 4 HOH C 27 1327 63 HOH HOH . 
L 4 HOH C 28 1328 60 HOH HOH . 
L 4 HOH C 29 1329 135 HOH HOH . 
L 4 HOH C 30 1330 176 HOH HOH . 
L 4 HOH C 31 1331 47 HOH HOH . 
L 4 HOH C 32 1332 151 HOH HOH . 
L 4 HOH C 33 1333 25 HOH HOH . 
L 4 HOH C 34 1334 22 HOH HOH . 
L 4 HOH C 35 1335 173 HOH HOH . 
L 4 HOH C 36 1336 105 HOH HOH . 
L 4 HOH C 37 1337 182 HOH HOH . 
L 4 HOH C 38 1338 147 HOH HOH . 
L 4 HOH C 39 1339 75 HOH HOH . 
L 4 HOH C 40 1340 89 HOH HOH . 
L 4 HOH C 41 1341 5 HOH HOH . 
L 4 HOH C 42 1342 159 HOH HOH . 
L 4 HOH C 43 1343 148 HOH HOH . 
L 4 HOH C 44 1344 114 HOH HOH . 
L 4 HOH C 45 1345 117 HOH HOH . 
L 4 HOH C 46 1346 121 HOH HOH . 
L 4 HOH C 47 1347 131 HOH HOH . 
L 4 HOH C 48 1348 34 HOH HOH . 
L 4 HOH C 49 1349 58 HOH HOH . 
L 4 HOH C 50 1350 37 HOH HOH . 
L 4 HOH C 51 1351 92 HOH HOH . 
M 4 HOH B 1 1301 3 HOH HOH . 
M 4 HOH B 2 1302 118 HOH HOH . 
M 4 HOH B 3 1303 186 HOH HOH . 
M 4 HOH B 4 1304 160 HOH HOH . 
M 4 HOH B 5 1305 157 HOH HOH . 
M 4 HOH B 6 1306 177 HOH HOH . 
M 4 HOH B 7 1307 174 HOH HOH . 
M 4 HOH B 8 1308 132 HOH HOH . 
M 4 HOH B 9 1309 40 HOH HOH . 
M 4 HOH B 10 1310 161 HOH HOH . 
M 4 HOH B 11 1311 85 HOH HOH . 
M 4 HOH B 12 1312 103 HOH HOH . 
M 4 HOH B 13 1313 126 HOH HOH . 
M 4 HOH B 14 1314 180 HOH HOH . 
M 4 HOH B 15 1315 29 HOH HOH . 
M 4 HOH B 16 1316 149 HOH HOH . 
M 4 HOH B 17 1317 46 HOH HOH . 
M 4 HOH B 18 1318 162 HOH HOH . 
M 4 HOH B 19 1319 134 HOH HOH . 
M 4 HOH B 20 1320 181 HOH HOH . 
M 4 HOH B 21 1321 128 HOH HOH . 
M 4 HOH B 22 1322 189 HOH HOH . 
M 4 HOH B 23 1323 122 HOH HOH . 
M 4 HOH B 24 1324 67 HOH HOH . 
M 4 HOH B 25 1325 20 HOH HOH . 
M 4 HOH B 26 1326 23 HOH HOH . 
M 4 HOH B 27 1327 42 HOH HOH . 
M 4 HOH B 28 1328 192 HOH HOH . 
M 4 HOH B 29 1329 142 HOH HOH . 
M 4 HOH B 30 1330 185 HOH HOH . 
M 4 HOH B 31 1331 27 HOH HOH . 
M 4 HOH B 32 1332 146 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . E 2 25.054 -10.514 14.457 1 51.69 ? C1 EDO 1201 A 1 
HETATM 2 O O1 EDO . . . E 2 24.795 -11.776 13.83 1 52 ? O1 EDO 1201 A 1 
HETATM 3 C C2 EDO . . . E 2 23.882 -9.578 14.226 1 50.32 ? C2 EDO 1201 A 1 
HETATM 4 O O2 EDO . . . E 2 23.567 -9.567 12.832 1 50.33 ? O2 EDO 1201 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           4 
#