data_8GB4 # _model_server_result.job_id mfYF_FCbmwbaW_dI97rapg _model_server_result.datetime_utc '2024-11-14 13:32:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8gb4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1101}' # _entry.id 8GB4 # _exptl.entry_id 8GB4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 118.45 _cell.angle_gamma 90 _cell.entry_id 8GB4 _cell.length_a 169.45 _cell.length_b 73.45 _cell.length_c 118.419 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8GB4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,Q 1 1 B,H,I,J,R 2 1 C,K,L,M,S 3 1 D,N,O,P,T 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N ? 2 K N N ? 2 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 151 A ASN 842 1_555 E MG MG . A MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc2 A OD2 ASP 164 A ASP 855 1_555 E MG MG . A MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc3 E MG MG . A MG 1101 1_555 F O2G ANP . A ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.866 ? metalc ? metalc4 E MG MG . A MG 1101 1_555 F O1B ANP . A ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc5 E MG MG . A MG 1101 1_555 F O2A ANP . A ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? metalc ? metalc6 B OD1 ASN 151 B ASN 842 1_555 H MG MG . B MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.875 ? metalc ? metalc7 B OD2 ASP 164 B ASP 855 1_555 H MG MG . B MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.881 ? metalc ? metalc8 H MG MG . B MG 1101 1_555 I O2G ANP . B ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc9 H MG MG . B MG 1101 1_555 I O1B ANP . B ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc10 H MG MG . B MG 1101 1_555 I O2A ANP . B ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc11 H MG MG . B MG 1101 1_555 R O HOH . B HOH 1214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? metalc ? metalc12 C OD1 ASN 151 C ASN 842 1_555 K MG MG . C MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? metalc ? metalc13 C OD2 ASP 164 C ASP 855 1_555 K MG MG . C MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.929 ? metalc ? metalc14 K MG MG . C MG 1101 1_555 L O2G ANP . C ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.633 ? metalc ? metalc15 K MG MG . C MG 1101 1_555 L O1B ANP . C ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc16 K MG MG . C MG 1101 1_555 L O2A ANP . C ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc17 K MG MG . C MG 1101 1_555 S O HOH . C HOH 1215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc18 D OD1 ASN 151 D ASN 842 1_555 N MG MG . D MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? metalc ? metalc19 D OD2 ASP 164 D ASP 855 1_555 N MG MG . D MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc20 N MG MG . D MG 1101 1_555 O O2A ANP . D ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc21 N MG MG . D MG 1101 1_555 O O2G ANP . D ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc22 N MG MG . D MG 1101 1_555 O O1B ANP . D ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc23 N MG MG . D MG 1101 1_555 T O HOH . D HOH 1218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8GB4 _atom_sites.fract_transf_matrix[1][1] 0.005901 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003198 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013615 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009604 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MG A 1 1101 1093 MG MG . F 3 ANP A 1 1102 1201 ANP ANP . G 4 YW5 A 1 1103 1202 YW5 209 . H 2 MG B 1 1101 1093 MG MG . I 3 ANP B 1 1102 1201 ANP ANP . J 4 YW5 B 1 1103 1202 YW5 209 . K 2 MG C 1 1101 1093 MG MG . L 3 ANP C 1 1102 1201 ANP ANP . M 4 YW5 C 1 1103 1202 YW5 209 . N 2 MG D 1 1101 1093 MG MG . O 3 ANP D 1 1102 1201 ANP ANP . P 4 YW5 D 1 1103 1202 YW5 209 . Q 5 HOH A 1 1201 59 HOH HOH . Q 5 HOH A 2 1202 47 HOH HOH . Q 5 HOH A 3 1203 58 HOH HOH . Q 5 HOH A 4 1204 39 HOH HOH . Q 5 HOH A 5 1205 14 HOH HOH . Q 5 HOH A 6 1206 70 HOH HOH . Q 5 HOH A 7 1207 106 HOH HOH . Q 5 HOH A 8 1208 1 HOH HOH . Q 5 HOH A 9 1209 55 HOH HOH . Q 5 HOH A 10 1210 90 HOH HOH . Q 5 HOH A 11 1211 49 HOH HOH . Q 5 HOH A 12 1212 54 HOH HOH . Q 5 HOH A 13 1213 107 HOH HOH . Q 5 HOH A 14 1214 88 HOH HOH . Q 5 HOH A 15 1215 72 HOH HOH . Q 5 HOH A 16 1216 33 HOH HOH . Q 5 HOH A 17 1217 17 HOH HOH . Q 5 HOH A 18 1218 84 HOH HOH . Q 5 HOH A 19 1219 5 HOH HOH . Q 5 HOH A 20 1220 64 HOH HOH . Q 5 HOH A 21 1221 68 HOH HOH . Q 5 HOH A 22 1222 56 HOH HOH . R 5 HOH B 1 1201 45 HOH HOH . R 5 HOH B 2 1202 95 HOH HOH . R 5 HOH B 3 1203 42 HOH HOH . R 5 HOH B 4 1204 44 HOH HOH . R 5 HOH B 5 1205 85 HOH HOH . R 5 HOH B 6 1206 105 HOH HOH . R 5 HOH B 7 1207 6 HOH HOH . R 5 HOH B 8 1208 87 HOH HOH . R 5 HOH B 9 1209 30 HOH HOH . R 5 HOH B 10 1210 71 HOH HOH . R 5 HOH B 11 1211 11 HOH HOH . R 5 HOH B 12 1212 108 HOH HOH . R 5 HOH B 13 1213 75 HOH HOH . R 5 HOH B 14 1214 32 HOH HOH . R 5 HOH B 15 1215 86 HOH HOH . R 5 HOH B 16 1216 35 HOH HOH . R 5 HOH B 17 1217 77 HOH HOH . R 5 HOH B 18 1218 92 HOH HOH . R 5 HOH B 19 1219 51 HOH HOH . R 5 HOH B 20 1220 9 HOH HOH . R 5 HOH B 21 1221 100 HOH HOH . R 5 HOH B 22 1222 46 HOH HOH . R 5 HOH B 23 1223 41 HOH HOH . R 5 HOH B 24 1224 19 HOH HOH . R 5 HOH B 25 1225 74 HOH HOH . R 5 HOH B 26 1226 2 HOH HOH . R 5 HOH B 27 1227 66 HOH HOH . R 5 HOH B 28 1228 93 HOH HOH . R 5 HOH B 29 1229 57 HOH HOH . R 5 HOH B 30 1230 111 HOH HOH . R 5 HOH B 31 1231 63 HOH HOH . R 5 HOH B 32 1232 110 HOH HOH . R 5 HOH B 33 1233 65 HOH HOH . R 5 HOH B 34 1234 52 HOH HOH . R 5 HOH B 35 1235 23 HOH HOH . R 5 HOH B 36 1236 53 HOH HOH . S 5 HOH C 1 1201 22 HOH HOH . S 5 HOH C 2 1202 37 HOH HOH . S 5 HOH C 3 1203 89 HOH HOH . S 5 HOH C 4 1204 3 HOH HOH . S 5 HOH C 5 1205 29 HOH HOH . S 5 HOH C 6 1206 103 HOH HOH . S 5 HOH C 7 1207 8 HOH HOH . S 5 HOH C 8 1208 97 HOH HOH . S 5 HOH C 9 1209 15 HOH HOH . S 5 HOH C 10 1210 34 HOH HOH . S 5 HOH C 11 1211 26 HOH HOH . S 5 HOH C 12 1212 78 HOH HOH . S 5 HOH C 13 1213 99 HOH HOH . S 5 HOH C 14 1214 82 HOH HOH . S 5 HOH C 15 1215 102 HOH HOH . S 5 HOH C 16 1216 76 HOH HOH . S 5 HOH C 17 1217 16 HOH HOH . S 5 HOH C 18 1218 83 HOH HOH . S 5 HOH C 19 1219 25 HOH HOH . S 5 HOH C 20 1220 38 HOH HOH . S 5 HOH C 21 1221 12 HOH HOH . S 5 HOH C 22 1222 109 HOH HOH . T 5 HOH D 1 1201 101 HOH HOH . T 5 HOH D 2 1202 43 HOH HOH . T 5 HOH D 3 1203 13 HOH HOH . T 5 HOH D 4 1204 96 HOH HOH . T 5 HOH D 5 1205 60 HOH HOH . T 5 HOH D 6 1206 24 HOH HOH . T 5 HOH D 7 1207 18 HOH HOH . T 5 HOH D 8 1208 104 HOH HOH . T 5 HOH D 9 1209 69 HOH HOH . T 5 HOH D 10 1210 81 HOH HOH . T 5 HOH D 11 1211 80 HOH HOH . T 5 HOH D 12 1212 20 HOH HOH . T 5 HOH D 13 1213 10 HOH HOH . T 5 HOH D 14 1214 98 HOH HOH . T 5 HOH D 15 1215 31 HOH HOH . T 5 HOH D 16 1216 61 HOH HOH . T 5 HOH D 17 1217 62 HOH HOH . T 5 HOH D 18 1218 27 HOH HOH . T 5 HOH D 19 1219 73 HOH HOH . T 5 HOH D 20 1220 50 HOH HOH . T 5 HOH D 21 1221 40 HOH HOH . T 5 HOH D 22 1222 36 HOH HOH . T 5 HOH D 23 1223 79 HOH HOH . T 5 HOH D 24 1224 48 HOH HOH . T 5 HOH D 25 1225 4 HOH HOH . T 5 HOH D 26 1226 21 HOH HOH . T 5 HOH D 27 1227 28 HOH HOH . T 5 HOH D 28 1228 67 HOH HOH . T 5 HOH D 29 1229 7 HOH HOH . T 5 HOH D 30 1230 91 HOH HOH . T 5 HOH D 31 1231 94 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 2 _atom_site.Cartn_x -7.391 _atom_site.Cartn_y 77.632 _atom_site.Cartn_z 49.834 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 44.09 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1101 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 35 _model_server_stats.parse_time_ms 38 _model_server_stats.create_model_time_ms 40 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 1 #