data_8GCX # _model_server_result.job_id ShJPUsXhGQyn8i5RFgd2QQ _model_server_result.datetime_utc '2024-11-14 06:28:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8gcx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":301}' # _entry.id 8GCX # _exptl.entry_id 8GCX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.36 _cell.angle_gamma 90 _cell.entry_id 8GCX _cell.length_a 80.14 _cell.length_b 98.07 _cell.length_c 113.72 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8GCX _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OG SER 44 A SER 70 1_555 F C7 TSL . A TSL 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.37 ? covale ? covale2 B OG SER 44 B SER 70 1_555 H C7 TSL . B TSL 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.371 ? covale ? covale3 C OG SER 44 C SER 70 1_555 J C7 TSL . C TSL 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.376 ? covale ? covale4 D OG SER 44 D SER 70 1_555 L C7 TSL . D TSL 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.371 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 8GCX _atom_sites.fract_transf_matrix[1][1] 0.012478 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004384 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010197 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009321 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PO4 A 1 301 301 PO4 PO4 . F 3 TSL A 1 302 302 TSL TSL . G 2 PO4 B 1 301 301 PO4 PO4 . H 3 TSL B 1 302 302 TSL TSL . I 2 PO4 C 1 301 301 PO4 PO4 . J 3 TSL C 1 302 302 TSL TSL . K 2 PO4 D 1 301 301 PO4 PO4 . L 3 TSL D 1 302 302 TSL TSL . M 4 HOH A 1 401 69 HOH HOH . M 4 HOH A 2 402 145 HOH HOH . M 4 HOH A 3 403 208 HOH HOH . M 4 HOH A 4 404 110 HOH HOH . M 4 HOH A 5 405 217 HOH HOH . M 4 HOH A 6 406 65 HOH HOH . M 4 HOH A 7 407 226 HOH HOH . M 4 HOH A 8 408 102 HOH HOH . M 4 HOH A 9 409 175 HOH HOH . M 4 HOH A 10 410 5 HOH HOH . M 4 HOH A 11 411 235 HOH HOH . M 4 HOH A 12 412 106 HOH HOH . M 4 HOH A 13 413 96 HOH HOH . M 4 HOH A 14 414 153 HOH HOH . M 4 HOH A 15 415 292 HOH HOH . M 4 HOH A 16 416 59 HOH HOH . M 4 HOH A 17 417 240 HOH HOH . M 4 HOH A 18 418 70 HOH HOH . M 4 HOH A 19 419 25 HOH HOH . M 4 HOH A 20 420 52 HOH HOH . M 4 HOH A 21 421 11 HOH HOH . M 4 HOH A 22 422 264 HOH HOH . M 4 HOH A 23 423 254 HOH HOH . M 4 HOH A 24 424 82 HOH HOH . M 4 HOH A 25 425 191 HOH HOH . M 4 HOH A 26 426 85 HOH HOH . M 4 HOH A 27 427 271 HOH HOH . M 4 HOH A 28 428 121 HOH HOH . M 4 HOH A 29 429 221 HOH HOH . M 4 HOH A 30 430 133 HOH HOH . M 4 HOH A 31 431 7 HOH HOH . M 4 HOH A 32 432 277 HOH HOH . M 4 HOH A 33 433 44 HOH HOH . M 4 HOH A 34 434 165 HOH HOH . M 4 HOH A 35 435 38 HOH HOH . M 4 HOH A 36 436 203 HOH HOH . M 4 HOH A 37 437 256 HOH HOH . M 4 HOH A 38 438 41 HOH HOH . M 4 HOH A 39 439 135 HOH HOH . M 4 HOH A 40 440 134 HOH HOH . M 4 HOH A 41 441 296 HOH HOH . M 4 HOH A 42 442 126 HOH HOH . M 4 HOH A 43 443 147 HOH HOH . M 4 HOH A 44 444 199 HOH HOH . M 4 HOH A 45 445 170 HOH HOH . M 4 HOH A 46 446 150 HOH HOH . M 4 HOH A 47 447 197 HOH HOH . M 4 HOH A 48 448 272 HOH HOH . M 4 HOH A 49 449 161 HOH HOH . M 4 HOH A 50 450 138 HOH HOH . M 4 HOH A 51 451 39 HOH HOH . M 4 HOH A 52 452 185 HOH HOH . M 4 HOH A 53 453 224 HOH HOH . M 4 HOH A 54 454 122 HOH HOH . M 4 HOH A 55 455 107 HOH HOH . M 4 HOH A 56 456 210 HOH HOH . M 4 HOH A 57 457 114 HOH HOH . M 4 HOH A 58 458 207 HOH HOH . M 4 HOH A 59 459 17 HOH HOH . M 4 HOH A 60 460 172 HOH HOH . M 4 HOH A 61 461 178 HOH HOH . M 4 HOH A 62 462 248 HOH HOH . M 4 HOH A 63 463 183 HOH HOH . M 4 HOH A 64 464 184 HOH HOH . M 4 HOH A 65 465 49 HOH HOH . M 4 HOH A 66 466 270 HOH HOH . M 4 HOH A 67 467 8 HOH HOH . M 4 HOH A 68 468 16 HOH HOH . M 4 HOH A 69 469 164 HOH HOH . M 4 HOH A 70 470 295 HOH HOH . M 4 HOH A 71 471 187 HOH HOH . M 4 HOH A 72 472 293 HOH HOH . M 4 HOH A 73 473 18 HOH HOH . M 4 HOH A 74 474 263 HOH HOH . M 4 HOH A 75 475 251 HOH HOH . M 4 HOH A 76 476 94 HOH HOH . M 4 HOH A 77 477 117 HOH HOH . M 4 HOH A 78 478 242 HOH HOH . M 4 HOH A 79 479 129 HOH HOH . M 4 HOH A 80 480 53 HOH HOH . M 4 HOH A 81 481 136 HOH HOH . M 4 HOH A 82 482 127 HOH HOH . M 4 HOH A 83 483 55 HOH HOH . M 4 HOH A 84 484 54 HOH HOH . M 4 HOH A 85 485 118 HOH HOH . N 4 HOH B 1 401 26 HOH HOH . N 4 HOH B 2 402 47 HOH HOH . N 4 HOH B 3 403 195 HOH HOH . N 4 HOH B 4 404 100 HOH HOH . N 4 HOH B 5 405 232 HOH HOH . N 4 HOH B 6 406 252 HOH HOH . N 4 HOH B 7 407 169 HOH HOH . N 4 HOH B 8 408 119 HOH HOH . N 4 HOH B 9 409 83 HOH HOH . N 4 HOH B 10 410 35 HOH HOH . N 4 HOH B 11 411 239 HOH HOH . N 4 HOH B 12 412 180 HOH HOH . N 4 HOH B 13 413 98 HOH HOH . N 4 HOH B 14 414 115 HOH HOH . N 4 HOH B 15 415 176 HOH HOH . N 4 HOH B 16 416 27 HOH HOH . N 4 HOH B 17 417 22 HOH HOH . N 4 HOH B 18 418 181 HOH HOH . N 4 HOH B 19 419 1 HOH HOH . N 4 HOH B 20 420 43 HOH HOH . N 4 HOH B 21 421 202 HOH HOH . N 4 HOH B 22 422 218 HOH HOH . N 4 HOH B 23 423 120 HOH HOH . N 4 HOH B 24 424 163 HOH HOH . N 4 HOH B 25 425 260 HOH HOH . N 4 HOH B 26 426 168 HOH HOH . N 4 HOH B 27 427 276 HOH HOH . N 4 HOH B 28 428 109 HOH HOH . N 4 HOH B 29 429 193 HOH HOH . N 4 HOH B 30 430 231 HOH HOH . N 4 HOH B 31 431 144 HOH HOH . O 4 HOH C 1 401 81 HOH HOH . O 4 HOH C 2 402 259 HOH HOH . O 4 HOH C 3 403 268 HOH HOH . O 4 HOH C 4 404 262 HOH HOH . O 4 HOH C 5 405 227 HOH HOH . O 4 HOH C 6 406 229 HOH HOH . O 4 HOH C 7 407 63 HOH HOH . O 4 HOH C 8 408 162 HOH HOH . O 4 HOH C 9 409 84 HOH HOH . O 4 HOH C 10 410 108 HOH HOH . O 4 HOH C 11 411 33 HOH HOH . O 4 HOH C 12 412 3 HOH HOH . O 4 HOH C 13 413 88 HOH HOH . O 4 HOH C 14 414 62 HOH HOH . O 4 HOH C 15 415 205 HOH HOH . O 4 HOH C 16 416 28 HOH HOH . O 4 HOH C 17 417 95 HOH HOH . O 4 HOH C 18 418 80 HOH HOH . O 4 HOH C 19 419 46 HOH HOH . O 4 HOH C 20 420 37 HOH HOH . O 4 HOH C 21 421 148 HOH HOH . O 4 HOH C 22 422 50 HOH HOH . O 4 HOH C 23 423 2 HOH HOH . O 4 HOH C 24 424 157 HOH HOH . O 4 HOH C 25 425 139 HOH HOH . O 4 HOH C 26 426 182 HOH HOH . O 4 HOH C 27 427 236 HOH HOH . O 4 HOH C 28 428 125 HOH HOH . O 4 HOH C 29 429 64 HOH HOH . O 4 HOH C 30 430 61 HOH HOH . O 4 HOH C 31 431 24 HOH HOH . O 4 HOH C 32 432 79 HOH HOH . O 4 HOH C 33 433 253 HOH HOH . O 4 HOH C 34 434 72 HOH HOH . O 4 HOH C 35 435 222 HOH HOH . O 4 HOH C 36 436 171 HOH HOH . O 4 HOH C 37 437 234 HOH HOH . O 4 HOH C 38 438 192 HOH HOH . O 4 HOH C 39 439 75 HOH HOH . O 4 HOH C 40 440 220 HOH HOH . O 4 HOH C 41 441 77 HOH HOH . O 4 HOH C 42 442 284 HOH HOH . O 4 HOH C 43 443 101 HOH HOH . O 4 HOH C 44 444 6 HOH HOH . O 4 HOH C 45 445 228 HOH HOH . O 4 HOH C 46 446 92 HOH HOH . O 4 HOH C 47 447 149 HOH HOH . O 4 HOH C 48 448 274 HOH HOH . O 4 HOH C 49 449 173 HOH HOH . O 4 HOH C 50 450 216 HOH HOH . O 4 HOH C 51 451 97 HOH HOH . O 4 HOH C 52 452 32 HOH HOH . O 4 HOH C 53 453 196 HOH HOH . O 4 HOH C 54 454 257 HOH HOH . O 4 HOH C 55 455 58 HOH HOH . O 4 HOH C 56 456 31 HOH HOH . O 4 HOH C 57 457 206 HOH HOH . O 4 HOH C 58 458 78 HOH HOH . O 4 HOH C 59 459 154 HOH HOH . O 4 HOH C 60 460 76 HOH HOH . O 4 HOH C 61 461 200 HOH HOH . O 4 HOH C 62 462 265 HOH HOH . O 4 HOH C 63 463 258 HOH HOH . O 4 HOH C 64 464 30 HOH HOH . O 4 HOH C 65 465 34 HOH HOH . O 4 HOH C 66 466 267 HOH HOH . O 4 HOH C 67 467 66 HOH HOH . O 4 HOH C 68 468 116 HOH HOH . O 4 HOH C 69 469 275 HOH HOH . O 4 HOH C 70 470 60 HOH HOH . O 4 HOH C 71 471 278 HOH HOH . O 4 HOH C 72 472 273 HOH HOH . O 4 HOH C 73 473 87 HOH HOH . O 4 HOH C 74 474 57 HOH HOH . O 4 HOH C 75 475 9 HOH HOH . O 4 HOH C 76 476 20 HOH HOH . O 4 HOH C 77 477 223 HOH HOH . O 4 HOH C 78 478 294 HOH HOH . O 4 HOH C 79 479 213 HOH HOH . O 4 HOH C 80 480 124 HOH HOH . O 4 HOH C 81 481 99 HOH HOH . O 4 HOH C 82 482 56 HOH HOH . O 4 HOH C 83 483 285 HOH HOH . O 4 HOH C 84 484 219 HOH HOH . O 4 HOH C 85 485 15 HOH HOH . O 4 HOH C 86 486 158 HOH HOH . O 4 HOH C 87 487 244 HOH HOH . O 4 HOH C 88 488 201 HOH HOH . O 4 HOH C 89 489 167 HOH HOH . O 4 HOH C 90 490 249 HOH HOH . O 4 HOH C 91 491 282 HOH HOH . O 4 HOH C 92 492 160 HOH HOH . O 4 HOH C 93 493 250 HOH HOH . O 4 HOH C 94 494 67 HOH HOH . O 4 HOH C 95 495 90 HOH HOH . O 4 HOH C 96 496 204 HOH HOH . O 4 HOH C 97 497 151 HOH HOH . O 4 HOH C 98 498 286 HOH HOH . O 4 HOH C 99 499 73 HOH HOH . O 4 HOH C 100 500 146 HOH HOH . O 4 HOH C 101 501 238 HOH HOH . O 4 HOH C 102 502 174 HOH HOH . O 4 HOH C 103 503 71 HOH HOH . O 4 HOH C 104 504 189 HOH HOH . O 4 HOH C 105 505 188 HOH HOH . O 4 HOH C 106 506 179 HOH HOH . O 4 HOH C 107 507 186 HOH HOH . O 4 HOH C 108 508 194 HOH HOH . P 4 HOH D 1 401 29 HOH HOH . P 4 HOH D 2 402 19 HOH HOH . P 4 HOH D 3 403 290 HOH HOH . P 4 HOH D 4 404 269 HOH HOH . P 4 HOH D 5 405 233 HOH HOH . P 4 HOH D 6 406 281 HOH HOH . P 4 HOH D 7 407 142 HOH HOH . P 4 HOH D 8 408 123 HOH HOH . P 4 HOH D 9 409 40 HOH HOH . P 4 HOH D 10 410 51 HOH HOH . P 4 HOH D 11 411 266 HOH HOH . P 4 HOH D 12 412 13 HOH HOH . P 4 HOH D 13 413 225 HOH HOH . P 4 HOH D 14 414 111 HOH HOH . P 4 HOH D 15 415 10 HOH HOH . P 4 HOH D 16 416 14 HOH HOH . P 4 HOH D 17 417 12 HOH HOH . P 4 HOH D 18 418 89 HOH HOH . P 4 HOH D 19 419 23 HOH HOH . P 4 HOH D 20 420 4 HOH HOH . P 4 HOH D 21 421 105 HOH HOH . P 4 HOH D 22 422 159 HOH HOH . P 4 HOH D 23 423 42 HOH HOH . P 4 HOH D 24 424 104 HOH HOH . P 4 HOH D 25 425 45 HOH HOH . P 4 HOH D 26 426 68 HOH HOH . P 4 HOH D 27 427 140 HOH HOH . P 4 HOH D 28 428 166 HOH HOH . P 4 HOH D 29 429 113 HOH HOH . P 4 HOH D 30 430 36 HOH HOH . P 4 HOH D 31 431 112 HOH HOH . P 4 HOH D 32 432 21 HOH HOH . P 4 HOH D 33 433 297 HOH HOH . P 4 HOH D 34 434 156 HOH HOH . P 4 HOH D 35 435 74 HOH HOH . P 4 HOH D 36 436 211 HOH HOH . P 4 HOH D 37 437 237 HOH HOH . P 4 HOH D 38 438 289 HOH HOH . P 4 HOH D 39 439 103 HOH HOH . P 4 HOH D 40 440 215 HOH HOH . P 4 HOH D 41 441 131 HOH HOH . P 4 HOH D 42 442 279 HOH HOH . P 4 HOH D 43 443 245 HOH HOH . P 4 HOH D 44 444 280 HOH HOH . P 4 HOH D 45 445 241 HOH HOH . P 4 HOH D 46 446 255 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . I 2 14.036 -41.126 34.761 1 40.2 ? P PO4 301 C 1 HETATM 2 O O1 PO4 . . . I 2 13.658 -40.815 33.333 1 52.75 ? O1 PO4 301 C 1 HETATM 3 O O2 PO4 . . . I 2 14.182 -42.62 34.921 1 55.35 ? O2 PO4 301 C 1 HETATM 4 O O3 PO4 . . . I 2 15.343 -40.45 35.099 1 49.5 ? O3 PO4 301 C 1 HETATM 5 O O4 PO4 . . . I 2 12.959 -40.616 35.688 1 41 ? O4 PO4 301 C 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 352 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #