data_8GDS # _model_server_result.job_id BSapdZFZN66h0Sgpw4RPjA _model_server_result.datetime_utc '2024-11-23 05:04:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8gds # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"X","auth_seq_id":503}' # _entry.id 8GDS # _exptl.entry_id 8GDS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 17 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8GDS _cell.length_a 143.084 _cell.length_b 143.329 _cell.length_c 134.363 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8GDS _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,H,I,J,Z 1 1 B,K,L,M,N,AA 2 1 C,O,P,Q,R,S,T,U,BA 3 1 D,V,W,X,Y,CA 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 W N N ? 3 X N N ? 3 Y N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 8GDS _atom_sites.fract_transf_matrix[1][1] 0.006989 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006977 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007443 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 Z8O A 1 501 4000 Z8O LIG . F 3 SO4 A 1 502 1 SO4 SO4 . G 3 SO4 A 1 503 3 SO4 SO4 . H 3 SO4 A 1 504 5 SO4 SO4 . I 3 SO4 A 1 505 7 SO4 SO4 . J 3 SO4 A 1 506 15 SO4 SO4 . K 2 Z8O B 1 501 4000 Z8O LIG . L 3 SO4 B 1 502 10 SO4 SO4 . M 3 SO4 B 1 503 12 SO4 SO4 . N 3 SO4 B 1 504 16 SO4 SO4 . O 2 Z8O C 1 501 4000 Z8O LIG . P 3 SO4 C 1 502 2 SO4 SO4 . Q 3 SO4 C 1 503 4 SO4 SO4 . R 3 SO4 C 1 504 6 SO4 SO4 . S 3 SO4 C 1 505 8 SO4 SO4 . T 3 SO4 C 1 506 14 SO4 SO4 . U 3 SO4 C 1 507 17 SO4 SO4 . V 2 Z8O D 1 501 4000 Z8O LIG . W 3 SO4 D 1 502 9 SO4 SO4 . X 3 SO4 D 1 503 11 SO4 SO4 . Y 3 SO4 D 1 504 13 SO4 SO4 . Z 4 HOH A 1 601 35 HOH HOH . Z 4 HOH A 2 602 28 HOH HOH . Z 4 HOH A 3 603 18 HOH HOH . Z 4 HOH A 4 604 36 HOH HOH . Z 4 HOH A 5 605 15 HOH HOH . Z 4 HOH A 6 606 30 HOH HOH . Z 4 HOH A 7 607 16 HOH HOH . Z 4 HOH A 8 608 25 HOH HOH . Z 4 HOH A 9 609 12 HOH HOH . Z 4 HOH A 10 610 7 HOH HOH . Z 4 HOH A 11 611 26 HOH HOH . Z 4 HOH A 12 612 43 HOH HOH . AA 4 HOH B 1 601 40 HOH HOH . AA 4 HOH B 2 602 19 HOH HOH . AA 4 HOH B 3 603 38 HOH HOH . AA 4 HOH B 4 604 27 HOH HOH . AA 4 HOH B 5 605 20 HOH HOH . AA 4 HOH B 6 606 13 HOH HOH . AA 4 HOH B 7 607 5 HOH HOH . AA 4 HOH B 8 608 29 HOH HOH . AA 4 HOH B 9 609 14 HOH HOH . AA 4 HOH B 10 610 4 HOH HOH . AA 4 HOH B 11 611 24 HOH HOH . AA 4 HOH B 12 612 41 HOH HOH . BA 4 HOH C 1 601 8 HOH HOH . BA 4 HOH C 2 602 33 HOH HOH . BA 4 HOH C 3 603 3 HOH HOH . BA 4 HOH C 4 604 37 HOH HOH . BA 4 HOH C 5 605 34 HOH HOH . BA 4 HOH C 6 606 9 HOH HOH . BA 4 HOH C 7 607 39 HOH HOH . BA 4 HOH C 8 608 32 HOH HOH . BA 4 HOH C 9 609 6 HOH HOH . BA 4 HOH C 10 610 10 HOH HOH . CA 4 HOH D 1 601 42 HOH HOH . CA 4 HOH D 2 602 17 HOH HOH . CA 4 HOH D 3 603 31 HOH HOH . CA 4 HOH D 4 604 21 HOH HOH . CA 4 HOH D 5 605 22 HOH HOH . CA 4 HOH D 6 606 11 HOH HOH . CA 4 HOH D 7 607 1 HOH HOH . CA 4 HOH D 8 608 2 HOH HOH . CA 4 HOH D 9 609 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . X 3 31.066 -7.803 -71.897 1 65.7 ? S SO4 503 D 1 HETATM 2 O O1 SO4 . . . X 3 32.386 -7.283 -72.285 1 65.59 ? O1 SO4 503 D 1 HETATM 3 O O2 SO4 . . . X 3 30.008 -7.351 -72.813 1 66.1 ? O2 SO4 503 D 1 HETATM 4 O O3 SO4 . . . X 3 31.089 -9.265 -71.931 1 65.28 ? O3 SO4 503 D 1 HETATM 5 O O4 SO4 . . . X 3 30.746 -7.28 -70.556 1 66.09 ? O4 SO4 503 D 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #