data_8GDW
#
_model_server_result.job_id            H3dG_H3jXop2oaPydtXyCA 
_model_server_result.datetime_utc      '2024-11-14 13:39:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8gdw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":201}' 
#
_entry.id    8GDW 
#
_exptl.entry_id    8GDW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.981 
_cell.angle_gamma         90 
_cell.entry_id            8GDW 
_cell.length_a            51.716 
_cell.length_b            87.23 
_cell.length_c            57.241 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8GDW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 16 AAA HIS 16 1_555 E ZN ZN . AAA ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
metalc ? metalc2 A NE2 HIS 21 AAA HIS 21 1_555 E ZN ZN . AAA ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
metalc ? metalc3 A OE1 GLU 69 AAA GLU 69 1_555 H ZN ZN . DDD ZN 201 2_756 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? 
metalc ? metalc4 A OE2 GLU 69 AAA GLU 69 1_555 H ZN ZN . DDD ZN 201 2_756 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? 
metalc ? metalc5 A NE2 HIS 79 AAA HIS 79 1_555 E ZN ZN . AAA ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? 
metalc ? metalc6 E ZN ZN . AAA ZN 201 1_555 D OE1 GLU 69 DDD GLU 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.93 ? 
metalc ? metalc7 E ZN ZN . AAA ZN 201 1_555 D OE2 GLU 69 DDD GLU 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? 
metalc ? metalc8 B NE2 HIS 16 BBB HIS 16 1_555 F ZN ZN . BBB ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
metalc ? metalc9 B NE2 HIS 21 BBB HIS 21 1_555 F ZN ZN . BBB ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
metalc ? metalc10 B OE1 GLU 69 BBB GLU 69 1_555 G ZN ZN . CCC ZN 201 2_847 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? 
metalc ? metalc11 B OE2 GLU 69 BBB GLU 69 1_555 G ZN ZN . CCC ZN 201 2_847 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? 
metalc ? metalc12 B NE2 HIS 79 BBB HIS 79 1_555 F ZN ZN . BBB ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.951 ? 
metalc ? metalc13 F ZN ZN . BBB ZN 201 1_555 C OE1 GLU 69 CCC GLU 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? 
metalc ? metalc14 F ZN ZN . BBB ZN 201 1_555 C OE2 GLU 69 CCC GLU 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.685 ? 
metalc ? metalc15 C NE2 HIS 16 CCC HIS 16 1_555 G ZN ZN . CCC ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? 
metalc ? metalc16 C NE2 HIS 21 CCC HIS 21 1_555 G ZN ZN . CCC ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? 
metalc ? metalc17 C NE2 HIS 79 CCC HIS 79 1_555 G ZN ZN . CCC ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.89 ? 
metalc ? metalc18 D NE2 HIS 16 DDD HIS 16 1_555 H ZN ZN . DDD ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
metalc ? metalc19 D NE2 HIS 21 DDD HIS 21 1_555 H ZN ZN . DDD ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? 
metalc ? metalc20 D NE2 HIS 79 DDD HIS 79 1_555 H ZN ZN . DDD ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.956 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8GDW 
_atom_sites.fract_transf_matrix[1][1]    0.019336 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001685 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011464 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017536 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 ZN AAA 1 201 201 ZN ZN . 
F 2 ZN BBB 1 201 201 ZN ZN . 
G 2 ZN CCC 1 201 201 ZN ZN . 
H 2 ZN DDD 1 201 201 ZN ZN . 
I 3 HOH AAA 1 301 24 HOH HOH . 
I 3 HOH AAA 2 302 33 HOH HOH . 
I 3 HOH AAA 3 303 17 HOH HOH . 
I 3 HOH AAA 4 304 30 HOH HOH . 
I 3 HOH AAA 5 305 12 HOH HOH . 
I 3 HOH AAA 6 306 6 HOH HOH . 
I 3 HOH AAA 7 307 3 HOH HOH . 
I 3 HOH AAA 8 308 10 HOH HOH . 
I 3 HOH AAA 9 309 23 HOH HOH . 
I 3 HOH AAA 10 310 8 HOH HOH . 
I 3 HOH AAA 11 311 14 HOH HOH . 
I 3 HOH AAA 12 312 35 HOH HOH . 
I 3 HOH AAA 13 313 25 HOH HOH . 
J 3 HOH BBB 1 301 28 HOH HOH . 
J 3 HOH BBB 2 302 19 HOH HOH . 
J 3 HOH BBB 3 303 18 HOH HOH . 
J 3 HOH BBB 4 304 36 HOH HOH . 
J 3 HOH BBB 5 305 32 HOH HOH . 
K 3 HOH CCC 1 301 29 HOH HOH . 
K 3 HOH CCC 2 302 1 HOH HOH . 
K 3 HOH CCC 3 303 22 HOH HOH . 
L 3 HOH DDD 1 301 5 HOH HOH . 
L 3 HOH DDD 2 302 31 HOH HOH . 
L 3 HOH DDD 3 303 27 HOH HOH . 
L 3 HOH DDD 4 304 4 HOH HOH . 
L 3 HOH DDD 5 305 7 HOH HOH . 
L 3 HOH DDD 6 306 15 HOH HOH . 
L 3 HOH DDD 7 307 2 HOH HOH . 
L 3 HOH DDD 8 308 21 HOH HOH . 
L 3 HOH DDD 9 309 9 HOH HOH . 
L 3 HOH DDD 10 310 11 HOH HOH . 
L 3 HOH DDD 11 311 34 HOH HOH . 
L 3 HOH DDD 12 312 16 HOH HOH . 
L 3 HOH DDD 13 313 13 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               72.595 
_atom_site.Cartn_y               25.134 
_atom_site.Cartn_z               49.93 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        56.64 
_atom_site.pdbx_formal_charge    0 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           201 
_atom_site.auth_asym_id          BBB 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    28 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#