data_8GFC # _model_server_result.job_id 7aQezndc5V0RGL2ynU9DTg _model_server_result.datetime_utc '2024-11-26 19:54:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8gfc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":604}' # _entry.id 8GFC # _exptl.entry_id 8GFC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8GFC _cell.length_a 176.494 _cell.length_b 176.494 _cell.length_c 176.494 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8GFC _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 90 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 87 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 105 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 102 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.123 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 103 n n S C1 DMS sing 104 n n S C2 DMS sing 105 n n C1 H11 DMS sing 106 n n C1 H12 DMS sing 107 n n C1 H13 DMS sing 108 n n C2 H21 DMS sing 109 n n C2 H22 DMS sing 110 n n C2 H23 DMS sing 111 n n # _atom_sites.entry_id 8GFC _atom_sites.fract_transf_matrix[1][1] 0.005666 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005666 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005666 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZI2 A 1 601 1 ZI2 UNL . C 3 CIT A 1 602 2 CIT CIT . D 4 DMS A 1 603 7 DMS DMS . E 4 DMS A 1 604 8 DMS DMS . F 5 HOH A 1 701 12 HOH HOH . F 5 HOH A 2 702 83 HOH HOH . F 5 HOH A 3 703 106 HOH HOH . F 5 HOH A 4 704 93 HOH HOH . F 5 HOH A 5 705 81 HOH HOH . F 5 HOH A 6 706 13 HOH HOH . F 5 HOH A 7 707 79 HOH HOH . F 5 HOH A 8 708 100 HOH HOH . F 5 HOH A 9 709 50 HOH HOH . F 5 HOH A 10 710 99 HOH HOH . F 5 HOH A 11 711 104 HOH HOH . F 5 HOH A 12 712 68 HOH HOH . F 5 HOH A 13 713 35 HOH HOH . F 5 HOH A 14 714 97 HOH HOH . F 5 HOH A 15 715 48 HOH HOH . F 5 HOH A 16 716 21 HOH HOH . F 5 HOH A 17 717 34 HOH HOH . F 5 HOH A 18 718 8 HOH HOH . F 5 HOH A 19 719 89 HOH HOH . F 5 HOH A 20 720 24 HOH HOH . F 5 HOH A 21 721 28 HOH HOH . F 5 HOH A 22 722 46 HOH HOH . F 5 HOH A 23 723 90 HOH HOH . F 5 HOH A 24 724 49 HOH HOH . F 5 HOH A 25 725 78 HOH HOH . F 5 HOH A 26 726 110 HOH HOH . F 5 HOH A 27 727 74 HOH HOH . F 5 HOH A 28 728 55 HOH HOH . F 5 HOH A 29 729 109 HOH HOH . F 5 HOH A 30 730 29 HOH HOH . F 5 HOH A 31 731 75 HOH HOH . F 5 HOH A 32 732 63 HOH HOH . F 5 HOH A 33 733 87 HOH HOH . F 5 HOH A 34 734 20 HOH HOH . F 5 HOH A 35 735 102 HOH HOH . F 5 HOH A 36 736 32 HOH HOH . F 5 HOH A 37 737 27 HOH HOH . F 5 HOH A 38 738 71 HOH HOH . F 5 HOH A 39 739 62 HOH HOH . F 5 HOH A 40 740 30 HOH HOH . F 5 HOH A 41 741 67 HOH HOH . F 5 HOH A 42 742 57 HOH HOH . F 5 HOH A 43 743 101 HOH HOH . F 5 HOH A 44 744 42 HOH HOH . F 5 HOH A 45 745 41 HOH HOH . F 5 HOH A 46 746 64 HOH HOH . F 5 HOH A 47 747 54 HOH HOH . F 5 HOH A 48 748 91 HOH HOH . F 5 HOH A 49 749 17 HOH HOH . F 5 HOH A 50 750 33 HOH HOH . F 5 HOH A 51 751 23 HOH HOH . F 5 HOH A 52 752 108 HOH HOH . F 5 HOH A 53 753 16 HOH HOH . F 5 HOH A 54 754 80 HOH HOH . F 5 HOH A 55 755 44 HOH HOH . F 5 HOH A 56 756 92 HOH HOH . F 5 HOH A 57 757 58 HOH HOH . F 5 HOH A 58 758 19 HOH HOH . F 5 HOH A 59 759 61 HOH HOH . F 5 HOH A 60 760 11 HOH HOH . F 5 HOH A 61 761 45 HOH HOH . F 5 HOH A 62 762 53 HOH HOH . F 5 HOH A 63 763 37 HOH HOH . F 5 HOH A 64 764 51 HOH HOH . F 5 HOH A 65 765 31 HOH HOH . F 5 HOH A 66 766 69 HOH HOH . F 5 HOH A 67 767 76 HOH HOH . F 5 HOH A 68 768 107 HOH HOH . F 5 HOH A 69 769 26 HOH HOH . F 5 HOH A 70 770 14 HOH HOH . F 5 HOH A 71 771 65 HOH HOH . F 5 HOH A 72 772 72 HOH HOH . F 5 HOH A 73 773 60 HOH HOH . F 5 HOH A 74 774 59 HOH HOH . F 5 HOH A 75 775 52 HOH HOH . F 5 HOH A 76 776 36 HOH HOH . F 5 HOH A 77 777 82 HOH HOH . F 5 HOH A 78 778 70 HOH HOH . F 5 HOH A 79 779 43 HOH HOH . F 5 HOH A 80 780 56 HOH HOH . F 5 HOH A 81 781 38 HOH HOH . F 5 HOH A 82 782 103 HOH HOH . F 5 HOH A 83 783 18 HOH HOH . F 5 HOH A 84 784 2 HOH HOH . F 5 HOH A 85 785 47 HOH HOH . F 5 HOH A 86 786 15 HOH HOH . F 5 HOH A 87 787 22 HOH HOH . F 5 HOH A 88 788 95 HOH HOH . F 5 HOH A 89 789 9 HOH HOH . F 5 HOH A 90 790 4 HOH HOH . F 5 HOH A 91 791 5 HOH HOH . F 5 HOH A 92 792 40 HOH HOH . F 5 HOH A 93 793 10 HOH HOH . F 5 HOH A 94 794 25 HOH HOH . F 5 HOH A 95 795 7 HOH HOH . F 5 HOH A 96 796 6 HOH HOH . F 5 HOH A 97 797 84 HOH HOH . F 5 HOH A 98 798 96 HOH HOH . F 5 HOH A 99 799 73 HOH HOH . F 5 HOH A 100 800 105 HOH HOH . F 5 HOH A 101 801 39 HOH HOH . F 5 HOH A 102 802 94 HOH HOH . F 5 HOH A 103 803 66 HOH HOH . F 5 HOH A 104 804 86 HOH HOH . F 5 HOH A 105 805 77 HOH HOH . F 5 HOH A 106 806 88 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . E 4 -25.138 -31.283 -60.88 1 71.22 ? S DMS 604 A 1 HETATM 2 O O DMS . . . E 4 -25.993 -30.191 -61.509 1 72.15 ? O DMS 604 A 1 HETATM 3 C C1 DMS . . . E 4 -26.267 -32.596 -60.44 1 61.4 ? C1 DMS 604 A 1 HETATM 4 C C2 DMS . . . E 4 -24.362 -32.078 -62.278 1 73.96 ? C2 DMS 604 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 349 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #