data_8GFJ # _model_server_result.job_id xb6NdgLHwCUroDGpVrH8Pw _model_server_result.datetime_utc '2024-11-13 21:43:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8gfj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 8GFJ # _exptl.entry_id 8GFJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8GFJ _cell.length_a 177.604 _cell.length_b 177.604 _cell.length_c 177.604 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8GFJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 90 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 87 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 105 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 102 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.052 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 8GFJ _atom_sites.fract_transf_matrix[1][1] 0.005631 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005631 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005631 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CIT A 1 601 2 CIT CIT . C 3 HOH A 1 701 330 HOH HOH . C 3 HOH A 2 702 310 HOH HOH . C 3 HOH A 3 703 39 HOH HOH . C 3 HOH A 4 704 107 HOH HOH . C 3 HOH A 5 705 100 HOH HOH . C 3 HOH A 6 706 112 HOH HOH . C 3 HOH A 7 707 8 HOH HOH . C 3 HOH A 8 708 322 HOH HOH . C 3 HOH A 9 709 369 HOH HOH . C 3 HOH A 10 710 13 HOH HOH . C 3 HOH A 11 711 82 HOH HOH . C 3 HOH A 12 712 324 HOH HOH . C 3 HOH A 13 713 161 HOH HOH . C 3 HOH A 14 714 288 HOH HOH . C 3 HOH A 15 715 371 HOH HOH . C 3 HOH A 16 716 4 HOH HOH . C 3 HOH A 17 717 37 HOH HOH . C 3 HOH A 18 718 346 HOH HOH . C 3 HOH A 19 719 17 HOH HOH . C 3 HOH A 20 720 155 HOH HOH . C 3 HOH A 21 721 48 HOH HOH . C 3 HOH A 22 722 331 HOH HOH . C 3 HOH A 23 723 116 HOH HOH . C 3 HOH A 24 724 337 HOH HOH . C 3 HOH A 25 725 134 HOH HOH . C 3 HOH A 26 726 1 HOH HOH . C 3 HOH A 27 727 185 HOH HOH . C 3 HOH A 28 728 175 HOH HOH . C 3 HOH A 29 729 301 HOH HOH . C 3 HOH A 30 730 23 HOH HOH . C 3 HOH A 31 731 142 HOH HOH . C 3 HOH A 32 732 94 HOH HOH . C 3 HOH A 33 733 256 HOH HOH . C 3 HOH A 34 734 305 HOH HOH . C 3 HOH A 35 735 294 HOH HOH . C 3 HOH A 36 736 195 HOH HOH . C 3 HOH A 37 737 188 HOH HOH . C 3 HOH A 38 738 343 HOH HOH . C 3 HOH A 39 739 202 HOH HOH . C 3 HOH A 40 740 44 HOH HOH . C 3 HOH A 41 741 86 HOH HOH . C 3 HOH A 42 742 61 HOH HOH . C 3 HOH A 43 743 97 HOH HOH . C 3 HOH A 44 744 191 HOH HOH . C 3 HOH A 45 745 374 HOH HOH . C 3 HOH A 46 746 196 HOH HOH . C 3 HOH A 47 747 372 HOH HOH . C 3 HOH A 48 748 295 HOH HOH . C 3 HOH A 49 749 266 HOH HOH . C 3 HOH A 50 750 121 HOH HOH . C 3 HOH A 51 751 85 HOH HOH . C 3 HOH A 52 752 166 HOH HOH . C 3 HOH A 53 753 124 HOH HOH . C 3 HOH A 54 754 345 HOH HOH . C 3 HOH A 55 755 30 HOH HOH . C 3 HOH A 56 756 146 HOH HOH . C 3 HOH A 57 757 76 HOH HOH . C 3 HOH A 58 758 360 HOH HOH . C 3 HOH A 59 759 293 HOH HOH . C 3 HOH A 60 760 303 HOH HOH . C 3 HOH A 61 761 335 HOH HOH . C 3 HOH A 62 762 96 HOH HOH . C 3 HOH A 63 763 163 HOH HOH . C 3 HOH A 64 764 60 HOH HOH . C 3 HOH A 65 765 51 HOH HOH . C 3 HOH A 66 766 53 HOH HOH . C 3 HOH A 67 767 143 HOH HOH . C 3 HOH A 68 768 133 HOH HOH . C 3 HOH A 69 769 72 HOH HOH . C 3 HOH A 70 770 50 HOH HOH . C 3 HOH A 71 771 119 HOH HOH . C 3 HOH A 72 772 273 HOH HOH . C 3 HOH A 73 773 313 HOH HOH . C 3 HOH A 74 774 210 HOH HOH . C 3 HOH A 75 775 99 HOH HOH . C 3 HOH A 76 776 291 HOH HOH . C 3 HOH A 77 777 67 HOH HOH . C 3 HOH A 78 778 314 HOH HOH . C 3 HOH A 79 779 68 HOH HOH . C 3 HOH A 80 780 187 HOH HOH . C 3 HOH A 81 781 91 HOH HOH . C 3 HOH A 82 782 129 HOH HOH . C 3 HOH A 83 783 328 HOH HOH . C 3 HOH A 84 784 334 HOH HOH . C 3 HOH A 85 785 353 HOH HOH . C 3 HOH A 86 786 300 HOH HOH . C 3 HOH A 87 787 49 HOH HOH . C 3 HOH A 88 788 184 HOH HOH . C 3 HOH A 89 789 289 HOH HOH . C 3 HOH A 90 790 73 HOH HOH . C 3 HOH A 91 791 348 HOH HOH . C 3 HOH A 92 792 24 HOH HOH . C 3 HOH A 93 793 355 HOH HOH . C 3 HOH A 94 794 370 HOH HOH . C 3 HOH A 95 795 92 HOH HOH . C 3 HOH A 96 796 148 HOH HOH . C 3 HOH A 97 797 170 HOH HOH . C 3 HOH A 98 798 298 HOH HOH . C 3 HOH A 99 799 90 HOH HOH . C 3 HOH A 100 800 147 HOH HOH . C 3 HOH A 101 801 126 HOH HOH . C 3 HOH A 102 802 93 HOH HOH . C 3 HOH A 103 803 315 HOH HOH . C 3 HOH A 104 804 59 HOH HOH . C 3 HOH A 105 805 79 HOH HOH . C 3 HOH A 106 806 149 HOH HOH . C 3 HOH A 107 807 299 HOH HOH . C 3 HOH A 108 808 154 HOH HOH . C 3 HOH A 109 809 338 HOH HOH . C 3 HOH A 110 810 227 HOH HOH . C 3 HOH A 111 811 137 HOH HOH . C 3 HOH A 112 812 158 HOH HOH . C 3 HOH A 113 813 198 HOH HOH . C 3 HOH A 114 814 286 HOH HOH . C 3 HOH A 115 815 342 HOH HOH . C 3 HOH A 116 816 333 HOH HOH . C 3 HOH A 117 817 58 HOH HOH . C 3 HOH A 118 818 81 HOH HOH . C 3 HOH A 119 819 106 HOH HOH . C 3 HOH A 120 820 103 HOH HOH . C 3 HOH A 121 821 375 HOH HOH . C 3 HOH A 122 822 43 HOH HOH . C 3 HOH A 123 823 65 HOH HOH . C 3 HOH A 124 824 376 HOH HOH . C 3 HOH A 125 825 349 HOH HOH . C 3 HOH A 126 826 181 HOH HOH . C 3 HOH A 127 827 290 HOH HOH . C 3 HOH A 128 828 302 HOH HOH . C 3 HOH A 129 829 55 HOH HOH . C 3 HOH A 130 830 167 HOH HOH . C 3 HOH A 131 831 220 HOH HOH . C 3 HOH A 132 832 341 HOH HOH . C 3 HOH A 133 833 78 HOH HOH . C 3 HOH A 134 834 378 HOH HOH . C 3 HOH A 135 835 192 HOH HOH . C 3 HOH A 136 836 109 HOH HOH . C 3 HOH A 137 837 132 HOH HOH . C 3 HOH A 138 838 110 HOH HOH . C 3 HOH A 139 839 64 HOH HOH . C 3 HOH A 140 840 26 HOH HOH . C 3 HOH A 141 841 105 HOH HOH . C 3 HOH A 142 842 87 HOH HOH . C 3 HOH A 143 843 329 HOH HOH . C 3 HOH A 144 844 157 HOH HOH . C 3 HOH A 145 845 16 HOH HOH . C 3 HOH A 146 846 296 HOH HOH . C 3 HOH A 147 847 317 HOH HOH . C 3 HOH A 148 848 174 HOH HOH . C 3 HOH A 149 849 339 HOH HOH . C 3 HOH A 150 850 14 HOH HOH . C 3 HOH A 151 851 2 HOH HOH . C 3 HOH A 152 852 15 HOH HOH . C 3 HOH A 153 853 5 HOH HOH . C 3 HOH A 154 854 356 HOH HOH . C 3 HOH A 155 855 316 HOH HOH . C 3 HOH A 156 856 199 HOH HOH . C 3 HOH A 157 857 111 HOH HOH . C 3 HOH A 158 858 321 HOH HOH . C 3 HOH A 159 859 186 HOH HOH . C 3 HOH A 160 860 3 HOH HOH . C 3 HOH A 161 861 131 HOH HOH . C 3 HOH A 162 862 377 HOH HOH . C 3 HOH A 163 863 127 HOH HOH . C 3 HOH A 164 864 98 HOH HOH . C 3 HOH A 165 865 297 HOH HOH . C 3 HOH A 166 866 226 HOH HOH . C 3 HOH A 167 867 88 HOH HOH . C 3 HOH A 168 868 269 HOH HOH . C 3 HOH A 169 869 118 HOH HOH . C 3 HOH A 170 870 56 HOH HOH . C 3 HOH A 171 871 11 HOH HOH . C 3 HOH A 172 872 77 HOH HOH . C 3 HOH A 173 873 101 HOH HOH . C 3 HOH A 174 874 304 HOH HOH . C 3 HOH A 175 875 113 HOH HOH . C 3 HOH A 176 876 236 HOH HOH . C 3 HOH A 177 877 307 HOH HOH . C 3 HOH A 178 878 83 HOH HOH . C 3 HOH A 179 879 52 HOH HOH . C 3 HOH A 180 880 84 HOH HOH . C 3 HOH A 181 881 117 HOH HOH . C 3 HOH A 182 882 312 HOH HOH . C 3 HOH A 183 883 140 HOH HOH . C 3 HOH A 184 884 145 HOH HOH . C 3 HOH A 185 885 327 HOH HOH . C 3 HOH A 186 886 89 HOH HOH . C 3 HOH A 187 887 306 HOH HOH . C 3 HOH A 188 888 57 HOH HOH . C 3 HOH A 189 889 63 HOH HOH . C 3 HOH A 190 890 80 HOH HOH . C 3 HOH A 191 891 367 HOH HOH . C 3 HOH A 192 892 350 HOH HOH . C 3 HOH A 193 893 54 HOH HOH . C 3 HOH A 194 894 66 HOH HOH . C 3 HOH A 195 895 135 HOH HOH . C 3 HOH A 196 896 122 HOH HOH . C 3 HOH A 197 897 172 HOH HOH . C 3 HOH A 198 898 74 HOH HOH . C 3 HOH A 199 899 292 HOH HOH . C 3 HOH A 200 900 160 HOH HOH . C 3 HOH A 201 901 70 HOH HOH . C 3 HOH A 202 902 138 HOH HOH . C 3 HOH A 203 903 332 HOH HOH . C 3 HOH A 204 904 309 HOH HOH . C 3 HOH A 205 905 253 HOH HOH . C 3 HOH A 206 906 33 HOH HOH . C 3 HOH A 207 907 123 HOH HOH . C 3 HOH A 208 908 75 HOH HOH . C 3 HOH A 209 909 69 HOH HOH . C 3 HOH A 210 910 308 HOH HOH . C 3 HOH A 211 911 42 HOH HOH . C 3 HOH A 212 912 336 HOH HOH . C 3 HOH A 213 913 319 HOH HOH . C 3 HOH A 214 914 326 HOH HOH . C 3 HOH A 215 915 32 HOH HOH . C 3 HOH A 216 916 318 HOH HOH . C 3 HOH A 217 917 311 HOH HOH . C 3 HOH A 218 918 258 HOH HOH . C 3 HOH A 219 919 114 HOH HOH . C 3 HOH A 220 920 379 HOH HOH . C 3 HOH A 221 921 141 HOH HOH . C 3 HOH A 222 922 151 HOH HOH . C 3 HOH A 223 923 351 HOH HOH . C 3 HOH A 224 924 264 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . B 2 37.05 48.096 2.104 1 80.09 ? C1 CIT 601 A 1 HETATM 2 O O1 CIT . . . B 2 37.391 48.359 0.925 1 67.26 ? O1 CIT 601 A 1 HETATM 3 O O2 CIT . . . B 2 36.555 48.937 2.893 1 61.66 ? O2 CIT 601 A 1 HETATM 4 C C2 CIT . . . B 2 37.225 46.66 2.579 1 79.56 ? C2 CIT 601 A 1 HETATM 5 C C3 CIT . . . B 2 36.881 45.589 1.53 1 83.57 ? C3 CIT 601 A 1 HETATM 6 O O7 CIT . . . B 2 37.687 45.799 0.377 1 68.13 ? O7 CIT 601 A 1 HETATM 7 C C4 CIT . . . B 2 35.372 45.696 1.218 1 73.43 ? C4 CIT 601 A 1 HETATM 8 C C5 CIT . . . B 2 34.7 44.529 0.496 1 71.8 ? C5 CIT 601 A 1 HETATM 9 O O3 CIT . . . B 2 35.408 43.622 -0.03 1 65.48 ? O3 CIT 601 A 1 HETATM 10 O O4 CIT . . . B 2 33.446 44.548 0.434 1 64.67 ? O4 CIT 601 A 1 HETATM 11 C C6 CIT . . . B 2 37.181 44.189 2.115 1 77.98 ? C6 CIT 601 A 1 HETATM 12 O O5 CIT . . . B 2 38.103 43.533 1.587 1 81.72 ? O5 CIT 601 A 1 HETATM 13 O O6 CIT . . . B 2 36.447 43.815 3.045 1 74.98 ? O6 CIT 601 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #