data_8GFL # _model_server_result.job_id 7OlaWOtK4AkyT_CtTS4hmw _model_server_result.datetime_utc '2024-11-19 13:39:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8gfl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":603}' # _entry.id 8GFL # _exptl.entry_id 8GFL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8GFL _cell.length_a 177.067 _cell.length_b 177.067 _cell.length_c 177.067 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8GFL _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 90 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 87 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 105 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 102 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.139 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 103 n n S C1 DMS sing 104 n n S C2 DMS sing 105 n n C1 H11 DMS sing 106 n n C1 H12 DMS sing 107 n n C1 H13 DMS sing 108 n n C2 H21 DMS sing 109 n n C2 H22 DMS sing 110 n n C2 H23 DMS sing 111 n n # _atom_sites.entry_id 8GFL _atom_sites.fract_transf_matrix[1][1] 0.005648 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005648 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005648 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZIE A 1 601 1 ZIE UNN . C 3 CIT A 1 602 2 CIT CIT . D 4 DMS A 1 603 3 DMS DMS . E 4 DMS A 1 604 4 DMS DMS . F 4 DMS A 1 605 5 DMS DMS . G 5 HOH A 1 701 343 HOH HOH . G 5 HOH A 2 702 116 HOH HOH . G 5 HOH A 3 703 364 HOH HOH . G 5 HOH A 4 704 278 HOH HOH . G 5 HOH A 5 705 48 HOH HOH . G 5 HOH A 6 706 310 HOH HOH . G 5 HOH A 7 707 346 HOH HOH . G 5 HOH A 8 708 8 HOH HOH . G 5 HOH A 9 709 330 HOH HOH . G 5 HOH A 10 710 288 HOH HOH . G 5 HOH A 11 711 186 HOH HOH . G 5 HOH A 12 712 215 HOH HOH . G 5 HOH A 13 713 357 HOH HOH . G 5 HOH A 14 714 23 HOH HOH . G 5 HOH A 15 715 389 HOH HOH . G 5 HOH A 16 716 1 HOH HOH . G 5 HOH A 17 717 6 HOH HOH . G 5 HOH A 18 718 125 HOH HOH . G 5 HOH A 19 719 50 HOH HOH . G 5 HOH A 20 720 37 HOH HOH . G 5 HOH A 21 721 161 HOH HOH . G 5 HOH A 22 722 175 HOH HOH . G 5 HOH A 23 723 256 HOH HOH . G 5 HOH A 24 724 85 HOH HOH . G 5 HOH A 25 725 196 HOH HOH . G 5 HOH A 26 726 91 HOH HOH . G 5 HOH A 27 727 4 HOH HOH . G 5 HOH A 28 728 158 HOH HOH . G 5 HOH A 29 729 134 HOH HOH . G 5 HOH A 30 730 301 HOH HOH . G 5 HOH A 31 731 295 HOH HOH . G 5 HOH A 32 732 163 HOH HOH . G 5 HOH A 33 733 126 HOH HOH . G 5 HOH A 34 734 331 HOH HOH . G 5 HOH A 35 735 53 HOH HOH . G 5 HOH A 36 736 353 HOH HOH . G 5 HOH A 37 737 73 HOH HOH . G 5 HOH A 38 738 61 HOH HOH . G 5 HOH A 39 739 337 HOH HOH . G 5 HOH A 40 740 220 HOH HOH . G 5 HOH A 41 741 112 HOH HOH . G 5 HOH A 42 742 335 HOH HOH . G 5 HOH A 43 743 266 HOH HOH . G 5 HOH A 44 744 185 HOH HOH . G 5 HOH A 45 745 60 HOH HOH . G 5 HOH A 46 746 338 HOH HOH . G 5 HOH A 47 747 51 HOH HOH . G 5 HOH A 48 748 294 HOH HOH . G 5 HOH A 49 749 122 HOH HOH . G 5 HOH A 50 750 170 HOH HOH . G 5 HOH A 51 751 188 HOH HOH . G 5 HOH A 52 752 142 HOH HOH . G 5 HOH A 53 753 97 HOH HOH . G 5 HOH A 54 754 96 HOH HOH . G 5 HOH A 55 755 291 HOH HOH . G 5 HOH A 56 756 127 HOH HOH . G 5 HOH A 57 757 147 HOH HOH . G 5 HOH A 58 758 191 HOH HOH . G 5 HOH A 59 759 391 HOH HOH . G 5 HOH A 60 760 49 HOH HOH . G 5 HOH A 61 761 334 HOH HOH . G 5 HOH A 62 762 129 HOH HOH . G 5 HOH A 63 763 82 HOH HOH . G 5 HOH A 64 764 55 HOH HOH . G 5 HOH A 65 765 100 HOH HOH . G 5 HOH A 66 766 324 HOH HOH . G 5 HOH A 67 767 369 HOH HOH . G 5 HOH A 68 768 124 HOH HOH . G 5 HOH A 69 769 213 HOH HOH . G 5 HOH A 70 770 167 HOH HOH . G 5 HOH A 71 771 76 HOH HOH . G 5 HOH A 72 772 13 HOH HOH . G 5 HOH A 73 773 119 HOH HOH . G 5 HOH A 74 774 313 HOH HOH . G 5 HOH A 75 775 77 HOH HOH . G 5 HOH A 76 776 133 HOH HOH . G 5 HOH A 77 777 121 HOH HOH . G 5 HOH A 78 778 344 HOH HOH . G 5 HOH A 79 779 290 HOH HOH . G 5 HOH A 80 780 68 HOH HOH . G 5 HOH A 81 781 143 HOH HOH . G 5 HOH A 82 782 109 HOH HOH . G 5 HOH A 83 783 328 HOH HOH . G 5 HOH A 84 784 154 HOH HOH . G 5 HOH A 85 785 181 HOH HOH . G 5 HOH A 86 786 289 HOH HOH . G 5 HOH A 87 787 286 HOH HOH . G 5 HOH A 88 788 166 HOH HOH . G 5 HOH A 89 789 348 HOH HOH . G 5 HOH A 90 790 137 HOH HOH . G 5 HOH A 91 791 103 HOH HOH . G 5 HOH A 92 792 303 HOH HOH . G 5 HOH A 93 793 86 HOH HOH . G 5 HOH A 94 794 148 HOH HOH . G 5 HOH A 95 795 72 HOH HOH . G 5 HOH A 96 796 92 HOH HOH . G 5 HOH A 97 797 65 HOH HOH . G 5 HOH A 98 798 44 HOH HOH . G 5 HOH A 99 799 93 HOH HOH . G 5 HOH A 100 800 273 HOH HOH . G 5 HOH A 101 801 381 HOH HOH . G 5 HOH A 102 802 145 HOH HOH . G 5 HOH A 103 803 90 HOH HOH . G 5 HOH A 104 804 384 HOH HOH . G 5 HOH A 105 805 78 HOH HOH . G 5 HOH A 106 806 355 HOH HOH . G 5 HOH A 107 807 300 HOH HOH . G 5 HOH A 108 808 94 HOH HOH . G 5 HOH A 109 809 379 HOH HOH . G 5 HOH A 110 810 16 HOH HOH . G 5 HOH A 111 811 360 HOH HOH . G 5 HOH A 112 812 321 HOH HOH . G 5 HOH A 113 813 138 HOH HOH . G 5 HOH A 114 814 146 HOH HOH . G 5 HOH A 115 815 159 HOH HOH . G 5 HOH A 116 816 198 HOH HOH . G 5 HOH A 117 817 64 HOH HOH . G 5 HOH A 118 818 342 HOH HOH . G 5 HOH A 119 819 192 HOH HOH . G 5 HOH A 120 820 58 HOH HOH . G 5 HOH A 121 821 111 HOH HOH . G 5 HOH A 122 822 153 HOH HOH . G 5 HOH A 123 823 132 HOH HOH . G 5 HOH A 124 824 305 HOH HOH . G 5 HOH A 125 825 394 HOH HOH . G 5 HOH A 126 826 87 HOH HOH . G 5 HOH A 127 827 293 HOH HOH . G 5 HOH A 128 828 320 HOH HOH . G 5 HOH A 129 829 302 HOH HOH . G 5 HOH A 130 830 131 HOH HOH . G 5 HOH A 131 831 298 HOH HOH . G 5 HOH A 132 832 341 HOH HOH . G 5 HOH A 133 833 333 HOH HOH . G 5 HOH A 134 834 99 HOH HOH . G 5 HOH A 135 835 102 HOH HOH . G 5 HOH A 136 836 14 HOH HOH . G 5 HOH A 137 837 67 HOH HOH . G 5 HOH A 138 838 2 HOH HOH . G 5 HOH A 139 839 15 HOH HOH . G 5 HOH A 140 840 356 HOH HOH . G 5 HOH A 141 841 105 HOH HOH . G 5 HOH A 142 842 268 HOH HOH . G 5 HOH A 143 843 79 HOH HOH . G 5 HOH A 144 844 329 HOH HOH . G 5 HOH A 145 845 314 HOH HOH . G 5 HOH A 146 846 11 HOH HOH . G 5 HOH A 147 847 172 HOH HOH . G 5 HOH A 148 848 57 HOH HOH . G 5 HOH A 149 849 327 HOH HOH . G 5 HOH A 150 850 269 HOH HOH . G 5 HOH A 151 851 386 HOH HOH . G 5 HOH A 152 852 52 HOH HOH . G 5 HOH A 153 853 56 HOH HOH . G 5 HOH A 154 854 59 HOH HOH . G 5 HOH A 155 855 43 HOH HOH . G 5 HOH A 156 856 71 HOH HOH . G 5 HOH A 157 857 309 HOH HOH . G 5 HOH A 158 858 98 HOH HOH . G 5 HOH A 159 859 378 HOH HOH . G 5 HOH A 160 860 367 HOH HOH . G 5 HOH A 161 861 317 HOH HOH . G 5 HOH A 162 862 296 HOH HOH . G 5 HOH A 163 863 140 HOH HOH . G 5 HOH A 164 864 349 HOH HOH . G 5 HOH A 165 865 292 HOH HOH . G 5 HOH A 166 866 316 HOH HOH . G 5 HOH A 167 867 347 HOH HOH . G 5 HOH A 168 868 81 HOH HOH . G 5 HOH A 169 869 54 HOH HOH . G 5 HOH A 170 870 385 HOH HOH . G 5 HOH A 171 871 3 HOH HOH . G 5 HOH A 172 872 63 HOH HOH . G 5 HOH A 173 873 135 HOH HOH . G 5 HOH A 174 874 226 HOH HOH . G 5 HOH A 175 875 5 HOH HOH . G 5 HOH A 176 876 75 HOH HOH . G 5 HOH A 177 877 123 HOH HOH . G 5 HOH A 178 878 160 HOH HOH . G 5 HOH A 179 879 306 HOH HOH . G 5 HOH A 180 880 380 HOH HOH . G 5 HOH A 181 881 83 HOH HOH . G 5 HOH A 182 882 88 HOH HOH . G 5 HOH A 183 883 152 HOH HOH . G 5 HOH A 184 884 383 HOH HOH . G 5 HOH A 185 885 375 HOH HOH . G 5 HOH A 186 886 307 HOH HOH . G 5 HOH A 187 887 312 HOH HOH . G 5 HOH A 188 888 253 HOH HOH . G 5 HOH A 189 889 118 HOH HOH . G 5 HOH A 190 890 271 HOH HOH . G 5 HOH A 191 891 89 HOH HOH . G 5 HOH A 192 892 304 HOH HOH . G 5 HOH A 193 893 74 HOH HOH . G 5 HOH A 194 894 9 HOH HOH . G 5 HOH A 195 895 101 HOH HOH . G 5 HOH A 196 896 297 HOH HOH . G 5 HOH A 197 897 70 HOH HOH . G 5 HOH A 198 898 80 HOH HOH . G 5 HOH A 199 899 332 HOH HOH . G 5 HOH A 200 900 69 HOH HOH . G 5 HOH A 201 901 212 HOH HOH . G 5 HOH A 202 902 308 HOH HOH . G 5 HOH A 203 903 84 HOH HOH . G 5 HOH A 204 904 257 HOH HOH . G 5 HOH A 205 905 319 HOH HOH . G 5 HOH A 206 906 33 HOH HOH . G 5 HOH A 207 907 255 HOH HOH . G 5 HOH A 208 908 336 HOH HOH . G 5 HOH A 209 909 387 HOH HOH . G 5 HOH A 210 910 276 HOH HOH . G 5 HOH A 211 911 42 HOH HOH . G 5 HOH A 212 912 326 HOH HOH . G 5 HOH A 213 913 32 HOH HOH . G 5 HOH A 214 914 263 HOH HOH . G 5 HOH A 215 915 311 HOH HOH . G 5 HOH A 216 916 141 HOH HOH . G 5 HOH A 217 917 284 HOH HOH . G 5 HOH A 218 918 114 HOH HOH . G 5 HOH A 219 919 372 HOH HOH . G 5 HOH A 220 920 351 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . D 4 -31.531 -61.125 -25.526 1 49.93 ? S DMS 603 A 1 HETATM 2 O O DMS . . . D 4 -30.416 -61.886 -26.234 1 47.99 ? O DMS 603 A 1 HETATM 3 C C1 DMS . . . D 4 -32.877 -61.05 -26.69 1 48.27 ? C1 DMS 603 A 1 HETATM 4 C C2 DMS . . . D 4 -32.211 -62.365 -24.44 1 53.29 ? C2 DMS 603 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #