data_8GJK
#
_model_server_result.job_id            hgLotxmNDOCSdOuZsVhfQA 
_model_server_result.datetime_utc      '2024-11-14 14:23:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8gjk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1101}' 
#
_entry.id    8GJK 
#
_exptl.entry_id    8GJK 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              367.42 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R,4S)-2-[(R)-{[(2R)-2-amino-2-phenylacetyl]amino}(carboxy)methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8GJK 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8GJK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C16 H21 N3 O5 S' 
_chem_comp.formula_weight    367.42 
_chem_comp.id                ZZ7 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R,4S)-2-[(R)-{[(2R)-2-amino-2-phenylacetyl]amino}(carboxy)methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'AMPICILLIN (open form)' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C2 ZZ7 doub 374 n n 
C2 O2 ZZ7 sing 375 n n 
C2 C12 ZZ7 sing 376 n n 
C12 C6 ZZ7 sing 377 n n 
C12 N3 ZZ7 sing 378 n n 
C6 C1 ZZ7 sing 379 n n 
C6 C16 ZZ7 sing 380 n n 
C6 S1 ZZ7 sing 381 n n 
S1 C13 ZZ7 sing 382 n n 
N3 C13 ZZ7 sing 383 n n 
C13 C14 ZZ7 sing 384 n n 
C14 C15 ZZ7 sing 385 n n 
C14 N1 ZZ7 sing 386 n n 
C15 O4 ZZ7 doub 387 n n 
C15 OXT ZZ7 sing 388 n n 
N1 C3 ZZ7 sing 389 n n 
C3 O3 ZZ7 doub 390 n n 
C3 C4 ZZ7 sing 391 n n 
C4 N2 ZZ7 sing 392 n n 
C4 C5 ZZ7 sing 393 n n 
C5 C7 ZZ7 sing 394 n y 
C5 C11 ZZ7 doub 395 n y 
C7 C8 ZZ7 doub 396 n y 
C8 C9 ZZ7 sing 397 n y 
C9 C10 ZZ7 doub 398 n y 
C10 C11 ZZ7 sing 399 n y 
O2 H2 ZZ7 sing 400 n n 
C12 H12 ZZ7 sing 401 n n 
N3 H3 ZZ7 sing 402 n n 
C1 H11C ZZ7 sing 403 n n 
C1 H12C ZZ7 sing 404 n n 
C1 H13C ZZ7 sing 405 n n 
C16 H161 ZZ7 sing 406 n n 
C16 H162 ZZ7 sing 407 n n 
C16 H163 ZZ7 sing 408 n n 
C13 H13 ZZ7 sing 409 n n 
C14 H14 ZZ7 sing 410 n n 
N1 H1 ZZ7 sing 411 n n 
OXT HXT ZZ7 sing 412 n n 
C4 H4 ZZ7 sing 413 n n 
N2 H21N ZZ7 sing 414 n n 
N2 H22N ZZ7 sing 415 n n 
C7 H7 ZZ7 sing 416 n n 
C11 H11 ZZ7 sing 417 n n 
C8 H8 ZZ7 sing 418 n n 
C9 H9 ZZ7 sing 419 n n 
C10 H10 ZZ7 sing 420 n n 
#
_atom_sites.entry_id                     8GJK 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          D 
_pdbx_nonpoly_scheme.entity_id        2 
_pdbx_nonpoly_scheme.mon_id           ZZ7 
_pdbx_nonpoly_scheme.pdb_strand_id    C 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      1101 
_pdbx_nonpoly_scheme.auth_seq_num     1101 
_pdbx_nonpoly_scheme.pdb_mon_id       ZZ7 
_pdbx_nonpoly_scheme.auth_mon_id      ZZ7 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 ZZ7 . . . D 2 164.775 163.648 173.583 1 20 ? O1 ZZ7 1101 C 1 
HETATM 2 C C2 ZZ7 . . . D 2 165.905 163.985 173.992 1 20 ? C2 ZZ7 1101 C 1 
HETATM 3 O O2 ZZ7 . . . D 2 166.957 163.409 173.641 1 20 ? O2 ZZ7 1101 C 1 
HETATM 4 C C12 ZZ7 . . . D 2 165.999 165.129 174.954 1 20 ? C12 ZZ7 1101 C 1 
HETATM 5 C C6 ZZ7 . . . D 2 166.228 166.453 174.231 1 20 ? C6 ZZ7 1101 C 1 
HETATM 6 C C1 ZZ7 . . . D 2 166.568 166.277 172.759 1 20 ? C1 ZZ7 1101 C 1 
HETATM 7 C C16 ZZ7 . . . D 2 167.345 167.213 174.924 1 20 ? C16 ZZ7 1101 C 1 
HETATM 8 S S1 ZZ7 . . . D 2 164.759 167.432 174.322 1 20 ? S1 ZZ7 1101 C 1 
HETATM 9 N N3 ZZ7 . . . D 2 164.791 165.269 175.727 1 20 ? N3 ZZ7 1101 C 1 
HETATM 10 C C13 ZZ7 . . . D 2 163.863 166.295 175.326 1 20 ? C13 ZZ7 1101 C 1 
HETATM 11 C C14 ZZ7 . . . D 2 163.292 166.984 176.554 1 20 ? C14 ZZ7 1101 C 1 
HETATM 12 C C15 ZZ7 . . . D 2 164.423 167.371 177.461 1 20 ? C15 ZZ7 1101 C 1 
HETATM 13 O O4 ZZ7 . . . D 2 164.635 166.678 178.479 1 20 ? O4 ZZ7 1101 C 1 
HETATM 14 N N1 ZZ7 . . . D 2 162.511 168.136 176.159 1 20 ? N1 ZZ7 1101 C 1 
HETATM 15 C C3 ZZ7 . . . D 2 161.536 168.62 176.921 1 20 ? C3 ZZ7 1101 C 1 
HETATM 16 O O3 ZZ7 . . . D 2 161.206 168.126 177.985 1 20 ? O3 ZZ7 1101 C 1 
HETATM 17 C C4 ZZ7 . . . D 2 160.836 169.841 176.408 1 20 ? C4 ZZ7 1101 C 1 
HETATM 18 N N2 ZZ7 . . . D 2 160.544 170.716 177.524 1 20 ? N2 ZZ7 1101 C 1 
HETATM 19 C C5 ZZ7 . . . D 2 159.574 169.462 175.738 1 20 ? C5 ZZ7 1101 C 1 
HETATM 20 C C7 ZZ7 . . . D 2 159.53 169.349 174.357 1 20 ? C7 ZZ7 1101 C 1 
HETATM 21 C C8 ZZ7 . . . D 2 158.342 168.998 173.73 1 20 ? C8 ZZ7 1101 C 1 
HETATM 22 C C9 ZZ7 . . . D 2 157.2 168.764 174.484 1 20 ? C9 ZZ7 1101 C 1 
HETATM 23 C C10 ZZ7 . . . D 2 157.245 168.879 175.866 1 20 ? C10 ZZ7 1101 C 1 
HETATM 24 C C11 ZZ7 . . . D 2 158.433 169.229 176.493 1 20 ? C11 ZZ7 1101 C 1 
HETATM 25 O OXT ZZ7 . . . D 2 165.115 168.365 177.165 1 20 ? OXT ZZ7 1101 C 1 
HETATM 26 H H12 ZZ7 . . . D 2 166.84 164.956 175.639 1 20 ? H12 ZZ7 1101 C 1 
HETATM 27 H H3 ZZ7 . . . D 2 164.601 164.672 176.518 1 20 ? H3 ZZ7 1101 C 1 
HETATM 28 H H11C ZZ7 . . . D 2 165.762 165.812 172.257 1 20 ? H11C ZZ7 1101 C 1 
HETATM 29 H H12C ZZ7 . . . D 2 167.443 165.689 172.661 1 20 ? H12C ZZ7 1101 C 1 
HETATM 30 H H13C ZZ7 . . . D 2 166.739 167.23 172.331 1 20 ? H13C ZZ7 1101 C 1 
HETATM 31 H H161 ZZ7 . . . D 2 168.249 166.672 174.82 1 20 ? H161 ZZ7 1101 C 1 
HETATM 32 H H162 ZZ7 . . . D 2 167.112 167.318 175.951 1 20 ? H162 ZZ7 1101 C 1 
HETATM 33 H H163 ZZ7 . . . D 2 167.449 168.169 174.481 1 20 ? H163 ZZ7 1101 C 1 
HETATM 34 H H13 ZZ7 . . . D 2 163.043 165.846 174.751 1 20 ? H13 ZZ7 1101 C 1 
HETATM 35 H H14 ZZ7 . . . D 2 162.636 166.271 177.077 1 20 ? H14 ZZ7 1101 C 1 
HETATM 36 H H1 ZZ7 . . . D 2 162.735 168.59 175.285 1 20 ? H1 ZZ7 1101 C 1 
HETATM 37 H H4 ZZ7 . . . D 2 161.492 170.357 175.695 1 20 ? H4 ZZ7 1101 C 1 
HETATM 38 H H21N ZZ7 . . . D 2 160.05 171.584 177.37 1 20 ? H21N ZZ7 1101 C 1 
HETATM 39 H H22N ZZ7 . . . D 2 160.835 170.454 178.453 1 20 ? H22N ZZ7 1101 C 1 
HETATM 40 H H7 ZZ7 . . . D 2 160.421 169.532 173.77 1 20 ? H7 ZZ7 1101 C 1 
HETATM 41 H H11 ZZ7 . . . D 2 158.467 169.319 177.569 1 20 ? H11 ZZ7 1101 C 1 
HETATM 42 H H8 ZZ7 . . . D 2 158.305 168.907 172.652 1 20 ? H8 ZZ7 1101 C 1 
HETATM 43 H H9 ZZ7 . . . D 2 156.275 168.489 173.994 1 20 ? H9 ZZ7 1101 C 1 
HETATM 44 H H10 ZZ7 . . . D 2 156.355 168.695 176.456 1 20 ? H10 ZZ7 1101 C 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    38 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          15 
_model_server_stats.element_count           44 
#