data_8GLZ # _model_server_result.job_id N-d8XdU4rjN3oGzVd7ecgA _model_server_result.datetime_utc '2024-11-15 17:43:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8glz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 8GLZ # _exptl.entry_id 8GLZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 138.121 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'P-HYDROXYBENZOIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.15 _cell.angle_gamma 90 _cell.entry_id 8GLZ _cell.length_a 41.168 _cell.length_b 51.615 _cell.length_c 79.456 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8GLZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 359 A CYS 358 1_555 B FE HEM . A HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc2 B FE HEM . A HEM 501 1_555 E O HOH . A HOH 647 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? # _chem_comp.formula 'C7 H6 O3' _chem_comp.formula_weight 138.121 _chem_comp.id PHB _chem_comp.mon_nstd_flag . _chem_comp.name 'P-HYDROXYBENZOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1' O1' PHB doub 319 n n C1' O2' PHB sing 320 n n C1' C1 PHB sing 321 n n O2' HO2' PHB sing 322 n n C1 C2 PHB sing 323 n y C1 C6 PHB doub 324 n y C2 C3 PHB doub 325 n y C2 H2 PHB sing 326 n n C3 C4 PHB sing 327 n y C3 H3 PHB sing 328 n n C4 C5 PHB doub 329 n y C4 O4 PHB sing 330 n n C5 C6 PHB sing 331 n y C5 H5 PHB sing 332 n n C6 H6 PHB sing 333 n n O4 HO4 PHB sing 334 n n # _atom_sites.entry_id 8GLZ _atom_sites.fract_transf_matrix[1][1] 0.024291 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000911 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019374 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012594 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 501 501 HEM HEM . C 3 PHB A 1 502 601 PHB LIG . D 4 CL A 1 503 1 CL CL . E 5 HOH A 1 601 113 HOH HOH . E 5 HOH A 2 602 15 HOH HOH . E 5 HOH A 3 603 78 HOH HOH . E 5 HOH A 4 604 79 HOH HOH . E 5 HOH A 5 605 134 HOH HOH . E 5 HOH A 6 606 106 HOH HOH . E 5 HOH A 7 607 115 HOH HOH . E 5 HOH A 8 608 55 HOH HOH . E 5 HOH A 9 609 57 HOH HOH . E 5 HOH A 10 610 63 HOH HOH . E 5 HOH A 11 611 41 HOH HOH . E 5 HOH A 12 612 126 HOH HOH . E 5 HOH A 13 613 211 HOH HOH . E 5 HOH A 14 614 212 HOH HOH . E 5 HOH A 15 615 215 HOH HOH . E 5 HOH A 16 616 142 HOH HOH . E 5 HOH A 17 617 173 HOH HOH . E 5 HOH A 18 618 175 HOH HOH . E 5 HOH A 19 619 7 HOH HOH . E 5 HOH A 20 620 190 HOH HOH . E 5 HOH A 21 621 127 HOH HOH . E 5 HOH A 22 622 187 HOH HOH . E 5 HOH A 23 623 199 HOH HOH . E 5 HOH A 24 624 34 HOH HOH . E 5 HOH A 25 625 119 HOH HOH . E 5 HOH A 26 626 230 HOH HOH . E 5 HOH A 27 627 124 HOH HOH . E 5 HOH A 28 628 191 HOH HOH . E 5 HOH A 29 629 112 HOH HOH . E 5 HOH A 30 630 183 HOH HOH . E 5 HOH A 31 631 131 HOH HOH . E 5 HOH A 32 632 221 HOH HOH . E 5 HOH A 33 633 18 HOH HOH . E 5 HOH A 34 634 25 HOH HOH . E 5 HOH A 35 635 235 HOH HOH . E 5 HOH A 36 636 144 HOH HOH . E 5 HOH A 37 637 197 HOH HOH . E 5 HOH A 38 638 6 HOH HOH . E 5 HOH A 39 639 14 HOH HOH . E 5 HOH A 40 640 5 HOH HOH . E 5 HOH A 41 641 3 HOH HOH . E 5 HOH A 42 642 93 HOH HOH . E 5 HOH A 43 643 27 HOH HOH . E 5 HOH A 44 644 98 HOH HOH . E 5 HOH A 45 645 68 HOH HOH . E 5 HOH A 46 646 39 HOH HOH . E 5 HOH A 47 647 1 HOH HOH . E 5 HOH A 48 648 40 HOH HOH . E 5 HOH A 49 649 36 HOH HOH . E 5 HOH A 50 650 209 HOH HOH . E 5 HOH A 51 651 101 HOH HOH . E 5 HOH A 52 652 76 HOH HOH . E 5 HOH A 53 653 242 HOH HOH . E 5 HOH A 54 654 164 HOH HOH . E 5 HOH A 55 655 65 HOH HOH . E 5 HOH A 56 656 117 HOH HOH . E 5 HOH A 57 657 9 HOH HOH . E 5 HOH A 58 658 201 HOH HOH . E 5 HOH A 59 659 89 HOH HOH . E 5 HOH A 60 660 8 HOH HOH . E 5 HOH A 61 661 59 HOH HOH . E 5 HOH A 62 662 200 HOH HOH . E 5 HOH A 63 663 189 HOH HOH . E 5 HOH A 64 664 229 HOH HOH . E 5 HOH A 65 665 120 HOH HOH . E 5 HOH A 66 666 152 HOH HOH . E 5 HOH A 67 667 223 HOH HOH . E 5 HOH A 68 668 125 HOH HOH . E 5 HOH A 69 669 49 HOH HOH . E 5 HOH A 70 670 48 HOH HOH . E 5 HOH A 71 671 236 HOH HOH . E 5 HOH A 72 672 84 HOH HOH . E 5 HOH A 73 673 43 HOH HOH . E 5 HOH A 74 674 99 HOH HOH . E 5 HOH A 75 675 165 HOH HOH . E 5 HOH A 76 676 35 HOH HOH . E 5 HOH A 77 677 2 HOH HOH . E 5 HOH A 78 678 130 HOH HOH . E 5 HOH A 79 679 136 HOH HOH . E 5 HOH A 80 680 208 HOH HOH . E 5 HOH A 81 681 46 HOH HOH . E 5 HOH A 82 682 196 HOH HOH . E 5 HOH A 83 683 219 HOH HOH . E 5 HOH A 84 684 83 HOH HOH . E 5 HOH A 85 685 161 HOH HOH . E 5 HOH A 86 686 33 HOH HOH . E 5 HOH A 87 687 10 HOH HOH . E 5 HOH A 88 688 85 HOH HOH . E 5 HOH A 89 689 51 HOH HOH . E 5 HOH A 90 690 56 HOH HOH . E 5 HOH A 91 691 104 HOH HOH . E 5 HOH A 92 692 128 HOH HOH . E 5 HOH A 93 693 108 HOH HOH . E 5 HOH A 94 694 44 HOH HOH . E 5 HOH A 95 695 38 HOH HOH . E 5 HOH A 96 696 184 HOH HOH . E 5 HOH A 97 697 102 HOH HOH . E 5 HOH A 98 698 23 HOH HOH . E 5 HOH A 99 699 105 HOH HOH . E 5 HOH A 100 700 241 HOH HOH . E 5 HOH A 101 701 64 HOH HOH . E 5 HOH A 102 702 80 HOH HOH . E 5 HOH A 103 703 132 HOH HOH . E 5 HOH A 104 704 50 HOH HOH . E 5 HOH A 105 705 26 HOH HOH . E 5 HOH A 106 706 69 HOH HOH . E 5 HOH A 107 707 202 HOH HOH . E 5 HOH A 108 708 19 HOH HOH . E 5 HOH A 109 709 138 HOH HOH . E 5 HOH A 110 710 37 HOH HOH . E 5 HOH A 111 711 20 HOH HOH . E 5 HOH A 112 712 170 HOH HOH . E 5 HOH A 113 713 11 HOH HOH . E 5 HOH A 114 714 180 HOH HOH . E 5 HOH A 115 715 52 HOH HOH . E 5 HOH A 116 716 185 HOH HOH . E 5 HOH A 117 717 171 HOH HOH . E 5 HOH A 118 718 28 HOH HOH . E 5 HOH A 119 719 4 HOH HOH . E 5 HOH A 120 720 96 HOH HOH . E 5 HOH A 121 721 151 HOH HOH . E 5 HOH A 122 722 145 HOH HOH . E 5 HOH A 123 723 159 HOH HOH . E 5 HOH A 124 724 72 HOH HOH . E 5 HOH A 125 725 71 HOH HOH . E 5 HOH A 126 726 88 HOH HOH . E 5 HOH A 127 727 225 HOH HOH . E 5 HOH A 128 728 77 HOH HOH . E 5 HOH A 129 729 153 HOH HOH . E 5 HOH A 130 730 121 HOH HOH . E 5 HOH A 131 731 234 HOH HOH . E 5 HOH A 132 732 12 HOH HOH . E 5 HOH A 133 733 118 HOH HOH . E 5 HOH A 134 734 123 HOH HOH . E 5 HOH A 135 735 122 HOH HOH . E 5 HOH A 136 736 157 HOH HOH . E 5 HOH A 137 737 47 HOH HOH . E 5 HOH A 138 738 32 HOH HOH . E 5 HOH A 139 739 109 HOH HOH . E 5 HOH A 140 740 74 HOH HOH . E 5 HOH A 141 741 172 HOH HOH . E 5 HOH A 142 742 45 HOH HOH . E 5 HOH A 143 743 240 HOH HOH . E 5 HOH A 144 744 143 HOH HOH . E 5 HOH A 145 745 114 HOH HOH . E 5 HOH A 146 746 22 HOH HOH . E 5 HOH A 147 747 147 HOH HOH . E 5 HOH A 148 748 70 HOH HOH . E 5 HOH A 149 749 133 HOH HOH . E 5 HOH A 150 750 13 HOH HOH . E 5 HOH A 151 751 16 HOH HOH . E 5 HOH A 152 752 29 HOH HOH . E 5 HOH A 153 753 67 HOH HOH . E 5 HOH A 154 754 146 HOH HOH . E 5 HOH A 155 755 17 HOH HOH . E 5 HOH A 156 756 243 HOH HOH . E 5 HOH A 157 757 91 HOH HOH . E 5 HOH A 158 758 188 HOH HOH . E 5 HOH A 159 759 24 HOH HOH . E 5 HOH A 160 760 111 HOH HOH . E 5 HOH A 161 761 232 HOH HOH . E 5 HOH A 162 762 178 HOH HOH . E 5 HOH A 163 763 110 HOH HOH . E 5 HOH A 164 764 156 HOH HOH . E 5 HOH A 165 765 54 HOH HOH . E 5 HOH A 166 766 95 HOH HOH . E 5 HOH A 167 767 92 HOH HOH . E 5 HOH A 168 768 75 HOH HOH . E 5 HOH A 169 769 82 HOH HOH . E 5 HOH A 170 770 220 HOH HOH . E 5 HOH A 171 771 94 HOH HOH . E 5 HOH A 172 772 61 HOH HOH . E 5 HOH A 173 773 228 HOH HOH . E 5 HOH A 174 774 62 HOH HOH . E 5 HOH A 175 775 81 HOH HOH . E 5 HOH A 176 776 167 HOH HOH . E 5 HOH A 177 777 73 HOH HOH . E 5 HOH A 178 778 206 HOH HOH . E 5 HOH A 179 779 100 HOH HOH . E 5 HOH A 180 780 21 HOH HOH . E 5 HOH A 181 781 107 HOH HOH . E 5 HOH A 182 782 233 HOH HOH . E 5 HOH A 183 783 31 HOH HOH . E 5 HOH A 184 784 60 HOH HOH . E 5 HOH A 185 785 30 HOH HOH . E 5 HOH A 186 786 148 HOH HOH . E 5 HOH A 187 787 66 HOH HOH . E 5 HOH A 188 788 207 HOH HOH . E 5 HOH A 189 789 166 HOH HOH . E 5 HOH A 190 790 217 HOH HOH . E 5 HOH A 191 791 90 HOH HOH . E 5 HOH A 192 792 139 HOH HOH . E 5 HOH A 193 793 239 HOH HOH . E 5 HOH A 194 794 244 HOH HOH . E 5 HOH A 195 795 141 HOH HOH . E 5 HOH A 196 796 53 HOH HOH . E 5 HOH A 197 797 149 HOH HOH . E 5 HOH A 198 798 195 HOH HOH . E 5 HOH A 199 799 160 HOH HOH . E 5 HOH A 200 800 181 HOH HOH . E 5 HOH A 201 801 103 HOH HOH . E 5 HOH A 202 802 194 HOH HOH . E 5 HOH A 203 803 87 HOH HOH . E 5 HOH A 204 804 214 HOH HOH . E 5 HOH A 205 805 168 HOH HOH . E 5 HOH A 206 806 203 HOH HOH . E 5 HOH A 207 807 218 HOH HOH . E 5 HOH A 208 808 193 HOH HOH . E 5 HOH A 209 809 198 HOH HOH . E 5 HOH A 210 810 210 HOH HOH . E 5 HOH A 211 811 154 HOH HOH . E 5 HOH A 212 812 86 HOH HOH . E 5 HOH A 213 813 150 HOH HOH . E 5 HOH A 214 814 140 HOH HOH . E 5 HOH A 215 815 186 HOH HOH . E 5 HOH A 216 816 135 HOH HOH . E 5 HOH A 217 817 163 HOH HOH . E 5 HOH A 218 818 158 HOH HOH . E 5 HOH A 219 819 216 HOH HOH . E 5 HOH A 220 820 174 HOH HOH . E 5 HOH A 221 821 213 HOH HOH . E 5 HOH A 222 822 42 HOH HOH . E 5 HOH A 223 823 205 HOH HOH . E 5 HOH A 224 824 116 HOH HOH . E 5 HOH A 225 825 227 HOH HOH . E 5 HOH A 226 826 192 HOH HOH . E 5 HOH A 227 827 231 HOH HOH . E 5 HOH A 228 828 162 HOH HOH . E 5 HOH A 229 829 169 HOH HOH . E 5 HOH A 230 830 182 HOH HOH . E 5 HOH A 231 831 177 HOH HOH . E 5 HOH A 232 832 155 HOH HOH . E 5 HOH A 233 833 176 HOH HOH . E 5 HOH A 234 834 226 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1' PHB . . . C 3 4.143 5.135 17.297 0.5 19.2 ? C1' PHB 502 A 1 HETATM 2 O O1' PHB . . . C 3 3.234 5.583 16.546 0.5 18.37 ? O1' PHB 502 A 1 HETATM 3 O O2' PHB . . . C 3 5.11 5.863 17.63 0.5 18.29 -1 O2' PHB 502 A 1 HETATM 4 C C1 PHB . . . C 3 4.089 3.691 17.801 0.5 22.29 ? C1 PHB 502 A 1 HETATM 5 C C2 PHB . . . C 3 3.208 2.772 17.239 0.5 23.15 ? C2 PHB 502 A 1 HETATM 6 C C3 PHB . . . C 3 3.163 1.466 17.693 0.5 22.69 ? C3 PHB 502 A 1 HETATM 7 C C4 PHB . . . C 3 4.012 1.077 18.717 0.5 20.58 ? C4 PHB 502 A 1 HETATM 8 C C5 PHB . . . C 3 4.894 1.991 19.268 0.5 22.52 ? C5 PHB 502 A 1 HETATM 9 C C6 PHB . . . C 3 4.94 3.293 18.816 0.5 21.73 ? C6 PHB 502 A 1 HETATM 10 O O4 PHB . . . C 3 3.984 -0.24 19.19 0.5 22.72 ? O4 PHB 502 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 10 #