data_8GMD
#
_model_server_result.job_id            7g9bHt1NDPPhivoTzjoWkA 
_model_server_result.datetime_utc      '2024-11-26 14:13:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8gmd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    8GMD 
#
_exptl.entry_id    8GMD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              448.524 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (5P)-3-({(8R)-5-[(4-aminopiperidin-1-yl)methyl]pyrrolo[2,1-f][1,2,4]triazin-4-yl}amino)-5-[2-(propan-2-yl)-2H-tetrazol-5-yl]phenol 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8GMD 
_cell.length_a            75.09 
_cell.length_b            75.09 
_cell.length_c            315.27 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8GMD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,J 1 1 
B,G,H,I,K 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 G N N 
#
_chem_comp.formula           'C22 H28 N10 O' 
_chem_comp.formula_weight    448.524 
_chem_comp.id                ZRR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (5P)-3-({(8R)-5-[(4-aminopiperidin-1-yl)methyl]pyrrolo[2,1-f][1,2,4]triazin-4-yl}amino)-5-[2-(propan-2-yl)-2H-tetrazol-5-yl]phenol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C9 C8 ZRR doub 380 n y 
C9 N2 ZRR sing 381 n y 
C8 C7 ZRR sing 382 n y 
N3 N2 ZRR sing 383 n y 
N3 C4 ZRR doub 384 n y 
N2 C1 ZRR sing 385 n y 
C4 N5 ZRR sing 386 n y 
C7 C1 ZRR doub 387 n y 
C7 C10 ZRR sing 388 n n 
C1 C6 ZRR sing 389 n y 
C10 N12 ZRR sing 390 n n 
N5 C6 ZRR doub 391 n y 
C6 N11 ZRR sing 392 n n 
N11 C13 ZRR sing 393 n n 
N12 C31 ZRR sing 394 n n 
N12 C27 ZRR sing 395 n n 
C31 C30 ZRR sing 396 n n 
C13 C18 ZRR doub 397 n y 
C13 C14 ZRR sing 398 n y 
C18 C17 ZRR sing 399 n y 
C27 C28 ZRR sing 400 n n 
C14 C15 ZRR doub 401 n y 
C25 C24 ZRR sing 402 n n 
C17 O33 ZRR sing 403 n n 
C17 C16 ZRR doub 404 n y 
C30 C29 ZRR sing 405 n n 
C15 C16 ZRR sing 406 n y 
C15 C19 ZRR sing 407 n n 
N23 C19 ZRR doub 408 n y 
N23 N22 ZRR sing 409 n y 
C19 N20 ZRR sing 410 n y 
C28 C29 ZRR sing 411 n n 
C24 N22 ZRR sing 412 n n 
C24 C26 ZRR sing 413 n n 
N22 N21 ZRR sing 414 n y 
C29 N32 ZRR sing 415 n n 
N20 N21 ZRR doub 416 n y 
C18 H1 ZRR sing 417 n n 
C16 H2 ZRR sing 418 n n 
C24 H3 ZRR sing 419 n n 
C27 H4 ZRR sing 420 n n 
C27 H5 ZRR sing 421 n n 
C4 H6 ZRR sing 422 n n 
C8 H8 ZRR sing 423 n n 
C9 H9 ZRR sing 424 n n 
C10 H10 ZRR sing 425 n n 
C10 H11 ZRR sing 426 n n 
N11 H12 ZRR sing 427 n n 
C14 H14 ZRR sing 428 n n 
C25 H15 ZRR sing 429 n n 
C25 H16 ZRR sing 430 n n 
C25 H17 ZRR sing 431 n n 
C26 H18 ZRR sing 432 n n 
C26 H19 ZRR sing 433 n n 
C26 H20 ZRR sing 434 n n 
C28 H21 ZRR sing 435 n n 
C28 H22 ZRR sing 436 n n 
C29 H23 ZRR sing 437 n n 
C30 H24 ZRR sing 438 n n 
C30 H25 ZRR sing 439 n n 
C31 H26 ZRR sing 440 n n 
C31 H27 ZRR sing 441 n n 
N32 H28 ZRR sing 442 n n 
N32 H29 ZRR sing 443 n n 
O33 H31 ZRR sing 444 n n 
#
_atom_sites.entry_id                     8GMD 
_atom_sites.fract_transf_matrix[1][1]    0.013317 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013317 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003172 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZRR A 1 401 401 ZRR LG1 . 
D 3 SO4 A 1 402 402 SO4 SO4 . 
E 3 SO4 A 1 403 403 SO4 SO4 . 
F 3 SO4 A 1 404 404 SO4 SO4 . 
G 2 ZRR B 1 401 401 ZRR LG1 . 
H 3 SO4 B 1 402 402 SO4 SO4 . 
I 3 SO4 B 1 403 403 SO4 SO4 . 
J 4 HOH A 1 501 501 HOH HOH . 
J 4 HOH A 2 502 502 HOH HOH . 
J 4 HOH A 3 503 503 HOH HOH . 
J 4 HOH A 4 504 504 HOH HOH . 
J 4 HOH A 5 505 505 HOH HOH . 
J 4 HOH A 6 506 506 HOH HOH . 
J 4 HOH A 7 507 507 HOH HOH . 
J 4 HOH A 8 508 508 HOH HOH . 
J 4 HOH A 9 509 509 HOH HOH . 
J 4 HOH A 10 510 510 HOH HOH . 
J 4 HOH A 11 511 511 HOH HOH . 
J 4 HOH A 12 512 512 HOH HOH . 
J 4 HOH A 13 513 513 HOH HOH . 
J 4 HOH A 14 514 514 HOH HOH . 
J 4 HOH A 15 515 515 HOH HOH . 
J 4 HOH A 16 516 516 HOH HOH . 
J 4 HOH A 17 517 517 HOH HOH . 
J 4 HOH A 18 518 518 HOH HOH . 
J 4 HOH A 19 519 519 HOH HOH . 
J 4 HOH A 20 520 520 HOH HOH . 
J 4 HOH A 21 521 521 HOH HOH . 
J 4 HOH A 22 522 522 HOH HOH . 
J 4 HOH A 23 523 523 HOH HOH . 
J 4 HOH A 24 524 524 HOH HOH . 
J 4 HOH A 25 525 525 HOH HOH . 
J 4 HOH A 26 526 526 HOH HOH . 
J 4 HOH A 27 527 527 HOH HOH . 
J 4 HOH A 28 528 528 HOH HOH . 
J 4 HOH A 29 529 529 HOH HOH . 
J 4 HOH A 30 530 530 HOH HOH . 
J 4 HOH A 31 531 531 HOH HOH . 
J 4 HOH A 32 532 532 HOH HOH . 
J 4 HOH A 33 533 533 HOH HOH . 
J 4 HOH A 34 534 534 HOH HOH . 
J 4 HOH A 35 535 535 HOH HOH . 
J 4 HOH A 36 536 536 HOH HOH . 
J 4 HOH A 37 537 537 HOH HOH . 
J 4 HOH A 38 538 538 HOH HOH . 
J 4 HOH A 39 539 539 HOH HOH . 
J 4 HOH A 40 540 540 HOH HOH . 
J 4 HOH A 41 541 541 HOH HOH . 
K 4 HOH B 1 501 501 HOH HOH . 
K 4 HOH B 2 502 502 HOH HOH . 
K 4 HOH B 3 503 503 HOH HOH . 
K 4 HOH B 4 504 504 HOH HOH . 
K 4 HOH B 5 505 505 HOH HOH . 
K 4 HOH B 6 506 506 HOH HOH . 
K 4 HOH B 7 507 507 HOH HOH . 
K 4 HOH B 8 508 508 HOH HOH . 
K 4 HOH B 9 509 509 HOH HOH . 
K 4 HOH B 10 510 510 HOH HOH . 
K 4 HOH B 11 511 511 HOH HOH . 
K 4 HOH B 12 512 512 HOH HOH . 
K 4 HOH B 13 513 513 HOH HOH . 
K 4 HOH B 14 514 514 HOH HOH . 
K 4 HOH B 15 515 515 HOH HOH . 
K 4 HOH B 16 516 516 HOH HOH . 
K 4 HOH B 17 517 517 HOH HOH . 
K 4 HOH B 18 518 518 HOH HOH . 
K 4 HOH B 19 519 519 HOH HOH . 
K 4 HOH B 20 520 520 HOH HOH . 
K 4 HOH B 21 521 521 HOH HOH . 
K 4 HOH B 22 522 522 HOH HOH . 
K 4 HOH B 23 523 523 HOH HOH . 
K 4 HOH B 24 524 524 HOH HOH . 
K 4 HOH B 25 525 525 HOH HOH . 
K 4 HOH B 26 526 526 HOH HOH . 
K 4 HOH B 27 527 527 HOH HOH . 
K 4 HOH B 28 528 528 HOH HOH . 
K 4 HOH B 29 529 529 HOH HOH . 
K 4 HOH B 30 530 530 HOH HOH . 
K 4 HOH B 31 531 531 HOH HOH . 
K 4 HOH B 32 532 532 HOH HOH . 
K 4 HOH B 33 533 533 HOH HOH . 
K 4 HOH B 34 534 534 HOH HOH . 
K 4 HOH B 35 535 535 HOH HOH . 
K 4 HOH B 36 536 536 HOH HOH . 
K 4 HOH B 37 537 537 HOH HOH . 
K 4 HOH B 38 538 538 HOH HOH . 
K 4 HOH B 39 539 539 HOH HOH . 
K 4 HOH B 40 540 540 HOH HOH . 
K 4 HOH B 41 541 541 HOH HOH . 
K 4 HOH B 42 542 542 HOH HOH . 
K 4 HOH B 43 543 543 HOH HOH . 
K 4 HOH B 44 544 544 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 ZRR . . . C 2 5.074 -6.332 31.61 1 39.88 ? C13 ZRR 401 A 1 
HETATM 2 C C18 ZRR . . . C 2 5.861 -7.463 31.818 1 40.09 ? C18 ZRR 401 A 1 
HETATM 3 C C17 ZRR . . . C 2 7.036 -7.359 32.547 1 44.76 ? C17 ZRR 401 A 1 
HETATM 4 C C16 ZRR . . . C 2 7.457 -6.132 33.044 1 46.4 ? C16 ZRR 401 A 1 
HETATM 5 C C15 ZRR . . . C 2 6.662 -5.002 32.857 1 47.43 ? C15 ZRR 401 A 1 
HETATM 6 C C19 ZRR . . . C 2 7.116 -3.688 33.347 1 53.21 ? C19 ZRR 401 A 1 
HETATM 7 C C24 ZRR . . . C 2 7.075 -0.147 33.683 1 62.29 ? C24 ZRR 401 A 1 
HETATM 8 C C27 ZRR . . . C 2 0.874 -4.9 32.135 1 50.69 ? C27 ZRR 401 A 1 
HETATM 9 C C1 ZRR . . . C 2 2.047 -7.046 29.443 1 41.54 ? C1 ZRR 401 A 1 
HETATM 10 N N2 ZRR . . . C 2 1.513 -8.139 28.787 1 43.11 ? N2 ZRR 401 A 1 
HETATM 11 N N3 ZRR . . . C 2 2.122 -9.377 28.638 1 43.54 ? N3 ZRR 401 A 1 
HETATM 12 C C4 ZRR . . . C 2 3.321 -9.439 29.192 1 42.02 ? C4 ZRR 401 A 1 
HETATM 13 N N5 ZRR . . . C 2 3.943 -8.468 29.864 1 43.37 ? N5 ZRR 401 A 1 
HETATM 14 C C6 ZRR . . . C 2 3.322 -7.287 30.021 1 39.72 ? C6 ZRR 401 A 1 
HETATM 15 C C7 ZRR . . . C 2 1.122 -6.013 29.318 1 42.08 ? C7 ZRR 401 A 1 
HETATM 16 C C8 ZRR . . . C 2 0.016 -6.526 28.587 1 44.15 ? C8 ZRR 401 A 1 
HETATM 17 C C9 ZRR . . . C 2 0.259 -7.819 28.273 1 43.39 ? C9 ZRR 401 A 1 
HETATM 18 C C10 ZRR . . . C 2 1.251 -4.583 29.768 1 42.72 ? C10 ZRR 401 A 1 
HETATM 19 N N11 ZRR . . . C 2 3.911 -6.341 30.811 1 37.66 ? N11 ZRR 401 A 1 
HETATM 20 N N12 ZRR . . . C 2 1.784 -4.367 31.112 1 48.22 1 N12 ZRR 401 A 1 
HETATM 21 C C14 ZRR . . . C 2 5.461 -5.114 32.159 1 43.05 ? C14 ZRR 401 A 1 
HETATM 22 N N20 ZRR . . . C 2 8.306 -3.479 33.954 1 56.04 ? N20 ZRR 401 A 1 
HETATM 23 N N21 ZRR . . . C 2 8.378 -2.186 34.188 1 57.99 ? N21 ZRR 401 A 1 
HETATM 24 N N22 ZRR . . . C 2 7.257 -1.669 33.718 1 59.92 ? N22 ZRR 401 A 1 
HETATM 25 N N23 ZRR . . . C 2 6.423 -2.563 33.203 1 56.8 ? N23 ZRR 401 A 1 
HETATM 26 C C25 ZRR . . . C 2 7.763 0.407 32.45 1 62.52 ? C25 ZRR 401 A 1 
HETATM 27 C C26 ZRR . . . C 2 5.609 0.249 33.74 1 65.34 ? C26 ZRR 401 A 1 
HETATM 28 C C28 ZRR . . . C 2 1.475 -4.752 33.529 1 49.93 ? C28 ZRR 401 A 1 
HETATM 29 C C29 ZRR . . . C 2 1.762 -3.292 33.841 1 52.71 ? C29 ZRR 401 A 1 
HETATM 30 C C30 ZRR . . . C 2 2.607 -2.674 32.738 1 51.41 ? C30 ZRR 401 A 1 
HETATM 31 C C31 ZRR . . . C 2 1.98 -2.929 31.363 1 50.67 ? C31 ZRR 401 A 1 
HETATM 32 N N32 ZRR . . . C 2 2.448 -3.178 35.137 1 53.68 1 N32 ZRR 401 A 1 
HETATM 33 O O33 ZRR . . . C 2 7.756 -8.484 32.844 1 49.78 ? O33 ZRR 401 A 1 
#
_model_server_stats.io_time_ms              94 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           33 
#