data_8GNE # _model_server_result.job_id UzmFe1LmySgIkkHWoXqK2Q _model_server_result.datetime_utc '2024-12-21 16:06:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8gne # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1201}' # _entry.id 8GNE # _exptl.entry_id 8GNE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 397.448 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[4-(furan-2-yl)-5-(oxan-4-ylcarbonyl)-1,3-thiazol-2-yl]-6-methyl-pyridine-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8GNE _cell.length_a 39.35 _cell.length_b 180.51 _cell.length_c 141.24 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8GNE _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 80 A CYS 71 1_555 A SG CYS 168 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? disulf ? disulf2 A SG CYS 83 A CYS 74 1_555 A SG CYS 155 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? disulf ? disulf3 A SG CYS 86 A CYS 77 1_555 A SG CYS 175 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf4 A SG CYS 364 A CYS 259 1_555 A SG CYS 367 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc1 A OD1 ASP 61 A ASP 52 1_555 Y NA NA . A NA 1224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? metalc ? metalc2 A OG SER 100 A SER 91 1_555 Y NA NA . A NA 1224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.893 ? # _chem_comp.formula 'C20 H19 N3 O4 S' _chem_comp.formula_weight 397.448 _chem_comp.id JQR _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[4-(furan-2-yl)-5-(oxan-4-ylcarbonyl)-1,3-thiazol-2-yl]-6-methyl-pyridine-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C16 C17 JQR sing 250 n n C16 O15 JQR sing 251 n n C17 C12 JQR sing 252 n n O15 C14 JQR sing 253 n n C5' C4' JQR doub 254 n y C5' C6' JQR sing 255 n y C4' C3' JQR sing 256 n y C8' C6' JQR sing 257 n n O7' C7' JQR doub 258 n n C6' N1' JQR doub 259 n y C12 C11 JQR sing 260 n n C12 C13 JQR sing 261 n n C3' C7' JQR sing 262 n n C3' C2' JQR doub 263 n y S1 C5 JQR sing 264 n y S1 C2 JQR sing 265 n y O11 C11 JQR doub 266 n n C7' N7' JQR sing 267 n n C11 C5 JQR sing 268 n n N1' C2' JQR sing 269 n y C14 C13 JQR sing 270 n n C5 C4 JQR doub 271 n y N7' C2 JQR sing 272 n n C2 N3 JQR doub 273 n y C4 N3 JQR sing 274 n y C4 C6 JQR sing 275 n n C6 C10 JQR doub 276 n y C6 O7 JQR sing 277 n y C10 C9 JQR sing 278 n y O7 C8 JQR sing 279 n y C9 C8 JQR doub 280 n y C8 H1 JQR sing 281 n n C12 H2 JQR sing 282 n n C10 H3 JQR sing 283 n n C9 H4 JQR sing 284 n n C14 H5 JQR sing 285 n n C14 H6 JQR sing 286 n n C17 H7 JQR sing 287 n n C17 H8 JQR sing 288 n n C13 H9 JQR sing 289 n n C13 H10 JQR sing 290 n n C16 H11 JQR sing 291 n n C16 H12 JQR sing 292 n n N7' H13 JQR sing 293 n n C2' H14 JQR sing 294 n n C8' H15 JQR sing 295 n n C8' H16 JQR sing 296 n n C8' H17 JQR sing 297 n n C5' H18 JQR sing 298 n n C4' H19 JQR sing 299 n n # _atom_sites.entry_id 8GNE _atom_sites.fract_transf_matrix[1][1] 0.025413 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00554 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00708 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JQR A 1 1201 1201 JQR KW6 . C 3 CLR A 1 1202 1301 CLR CLR . D 3 CLR A 1 1203 1302 CLR CLR . E 3 CLR A 1 1204 1303 CLR CLR . F 4 OLC A 1 1205 1401 OLC OLC . G 4 OLC A 1 1206 1402 OLC OLC . H 4 OLC A 1 1207 1403 OLC OLC . I 4 OLC A 1 1208 1404 OLC OLC . J 4 OLC A 1 1209 1405 OLC OLC . K 4 OLC A 1 1210 1406 OLC OLC . L 4 OLC A 1 1211 1407 OLC OLC . M 4 OLC A 1 1212 1408 OLC OLC . N 4 OLC A 1 1213 1409 OLC OLC . O 4 OLC A 1 1214 1410 OLC OLC . P 4 OLC A 1 1215 1411 OLC OLC . Q 4 OLC A 1 1216 1412 OLC OLC . R 4 OLC A 1 1217 1413 OLC OLC . S 4 OLC A 1 1218 1414 OLC OLC . T 4 OLC A 1 1219 1415 OLC OLC . U 4 OLC A 1 1220 1416 OLC OLC . V 4 OLC A 1 1221 1417 OLC OLC . W 4 OLC A 1 1222 1418 OLC OLC . X 5 PE4 A 1 1223 1501 PE4 PE4 . Y 6 NA A 1 1224 2000 NA NA . Z 7 HOH A 1 1301 2042 HOH HOH . Z 7 HOH A 2 1302 2038 HOH HOH . Z 7 HOH A 3 1303 2052 HOH HOH . Z 7 HOH A 4 1304 2030 HOH HOH . Z 7 HOH A 5 1305 2001 HOH HOH . Z 7 HOH A 6 1306 2045 HOH HOH . Z 7 HOH A 7 1307 2037 HOH HOH . Z 7 HOH A 8 1308 2004 HOH HOH . Z 7 HOH A 9 1309 2011 HOH HOH . Z 7 HOH A 10 1310 2008 HOH HOH . Z 7 HOH A 11 1311 2016 HOH HOH . Z 7 HOH A 12 1312 2026 HOH HOH . Z 7 HOH A 13 1313 2014 HOH HOH . Z 7 HOH A 14 1314 2035 HOH HOH . Z 7 HOH A 15 1315 2002 HOH HOH . Z 7 HOH A 16 1316 2044 HOH HOH . Z 7 HOH A 17 1317 2005 HOH HOH . Z 7 HOH A 18 1318 2020 HOH HOH . Z 7 HOH A 19 1319 2024 HOH HOH . Z 7 HOH A 20 1320 2003 HOH HOH . Z 7 HOH A 21 1321 2049 HOH HOH . Z 7 HOH A 22 1322 2028 HOH HOH . Z 7 HOH A 23 1323 2033 HOH HOH . Z 7 HOH A 24 1324 2006 HOH HOH . Z 7 HOH A 25 1325 2048 HOH HOH . Z 7 HOH A 26 1326 2018 HOH HOH . Z 7 HOH A 27 1327 2019 HOH HOH . Z 7 HOH A 28 1328 2054 HOH HOH . Z 7 HOH A 29 1329 2023 HOH HOH . Z 7 HOH A 30 1330 2029 HOH HOH . Z 7 HOH A 31 1331 2007 HOH HOH . Z 7 HOH A 32 1332 2053 HOH HOH . Z 7 HOH A 33 1333 2025 HOH HOH . Z 7 HOH A 34 1334 2015 HOH HOH . Z 7 HOH A 35 1335 2061 HOH HOH . Z 7 HOH A 36 1336 2046 HOH HOH . Z 7 HOH A 37 1337 2040 HOH HOH . Z 7 HOH A 38 1338 2041 HOH HOH . Z 7 HOH A 39 1339 2021 HOH HOH . Z 7 HOH A 40 1340 2062 HOH HOH . Z 7 HOH A 41 1341 2059 HOH HOH . Z 7 HOH A 42 1342 2009 HOH HOH . Z 7 HOH A 43 1343 2050 HOH HOH . Z 7 HOH A 44 1344 2010 HOH HOH . Z 7 HOH A 45 1345 2051 HOH HOH . Z 7 HOH A 46 1346 2060 HOH HOH . Z 7 HOH A 47 1347 2032 HOH HOH . Z 7 HOH A 48 1348 2034 HOH HOH . Z 7 HOH A 49 1349 2017 HOH HOH . Z 7 HOH A 50 1350 2058 HOH HOH . Z 7 HOH A 51 1351 2022 HOH HOH . Z 7 HOH A 52 1352 2027 HOH HOH . Z 7 HOH A 53 1353 2031 HOH HOH . Z 7 HOH A 54 1354 2043 HOH HOH . Z 7 HOH A 55 1355 2012 HOH HOH . Z 7 HOH A 56 1356 2039 HOH HOH . Z 7 HOH A 57 1357 2036 HOH HOH . Z 7 HOH A 58 1358 2057 HOH HOH . Z 7 HOH A 59 1359 2013 HOH HOH . Z 7 HOH A 60 1360 2055 HOH HOH . Z 7 HOH A 61 1361 2047 HOH HOH . Z 7 HOH A 62 1362 2056 HOH HOH . Z 7 HOH A 63 1363 2063 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C8 JQR . . . B 2 -1.865 -1.961 20.016 1 36.78 ? C8 JQR 1201 A 1 HETATM 2 C C12 JQR . . . B 2 3.699 -5.291 17.72 1 30.49 ? C12 JQR 1201 A 1 HETATM 3 C C11 JQR . . . B 2 2.41 -4.483 18.007 1 30.2 ? C11 JQR 1201 A 1 HETATM 4 C C10 JQR . . . B 2 0.255 -2.279 19.49 1 34.8 ? C10 JQR 1201 A 1 HETATM 5 C C9 JQR . . . B 2 -0.651 -1.312 19.969 1 36.96 ? C9 JQR 1201 A 1 HETATM 6 C C14 JQR . . . B 2 6.041 -5.736 18.188 1 32.79 ? C14 JQR 1201 A 1 HETATM 7 C C17 JQR . . . B 2 4.062 -5.44 16.191 1 30.29 ? C17 JQR 1201 A 1 HETATM 8 C C6 JQR . . . B 2 -0.501 -3.442 19.318 1 33.47 ? C6 JQR 1201 A 1 HETATM 9 C C4 JQR . . . B 2 -0.078 -4.75 18.807 1 31.44 ? C4 JQR 1201 A 1 HETATM 10 C C2 JQR . . . B 2 -0.577 -6.85 18.47 1 31.7 ? C2 JQR 1201 A 1 HETATM 11 C C13 JQR . . . B 2 4.887 -4.831 18.558 1 31.26 ? C13 JQR 1201 A 1 HETATM 12 C C16 JQR . . . B 2 5.427 -6.141 16.032 1 31.86 ? C16 JQR 1201 A 1 HETATM 13 C C5 JQR . . . B 2 1.151 -5.224 18.26 1 30.19 ? C5 JQR 1201 A 1 HETATM 14 N N3 JQR . . . B 2 -1.024 -5.705 18.909 1 31.91 ? N3 JQR 1201 A 1 HETATM 15 O O11 JQR . . . B 2 2.457 -3.241 17.915 1 31.01 ? O11 JQR 1201 A 1 HETATM 16 O O15 JQR . . . B 2 6.431 -5.518 16.805 1 32.19 ? O15 JQR 1201 A 1 HETATM 17 O O7 JQR . . . B 2 -1.799 -3.233 19.622 1 34.68 ? O7 JQR 1201 A 1 HETATM 18 S S1 JQR . . . B 2 1.098 -6.937 17.9 1 29.01 ? S1 JQR 1201 A 1 HETATM 19 N N7' JQR . . . B 2 -1.369 -7.973 18.378 1 33.44 ? N7' JQR 1201 A 1 HETATM 20 C C7' JQR . . . B 2 -0.919 -9.186 17.925 1 34.67 ? C7' JQR 1201 A 1 HETATM 21 O O7' JQR . . . B 2 0.178 -9.367 17.511 1 36.21 ? O7' JQR 1201 A 1 HETATM 22 C C3' JQR . . . B 2 -1.773 -10.362 17.833 1 37.37 ? C3' JQR 1201 A 1 HETATM 23 C C2' JQR . . . B 2 -3.111 -10.334 18.233 1 38.49 ? C2' JQR 1201 A 1 HETATM 24 N N1' JQR . . . B 2 -3.923 -11.415 18.095 1 42.33 ? N1' JQR 1201 A 1 HETATM 25 C C6' JQR . . . B 2 -3.442 -12.554 17.531 1 45.36 ? C6' JQR 1201 A 1 HETATM 26 C C8' JQR . . . B 2 -4.339 -13.764 17.414 1 51.37 ? C8' JQR 1201 A 1 HETATM 27 C C5' JQR . . . B 2 -2.138 -12.636 17.074 1 44.51 ? C5' JQR 1201 A 1 HETATM 28 C C4' JQR . . . B 2 -1.32 -11.543 17.198 1 40.13 ? C4' JQR 1201 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #