data_8GPZ # _model_server_result.job_id nHi3l09Yy4Z0eBOm9be0jg _model_server_result.datetime_utc '2025-01-10 16:40:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8gpz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 8GPZ # _exptl.entry_id 8GPZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 231.297 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-methyl-6-(4-methylpiperidin-1-yl)-[1,2,4]triazolo[4,3-b]pyridazine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8GPZ _cell.length_a 32.158 _cell.length_b 47.318 _cell.length_c 79.54 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8GPZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OH TYR 23 A TYR 65 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc2 A O LYS 118 A LYS 160 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc3 A O GLU 121 A GLU 163 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc4 D NA NA . A NA 203 1_555 F O HOH . A HOH 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc5 D NA NA . A NA 203 1_555 F O HOH . A HOH 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? # _chem_comp.formula 'C12 H17 N5' _chem_comp.formula_weight 231.297 _chem_comp.id KC3 _chem_comp.mon_nstd_flag . _chem_comp.name 3-methyl-6-(4-methylpiperidin-1-yl)-[1,2,4]triazolo[4,3-b]pyridazine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 C5 KC3 sing 177 n n C4 C5 KC3 sing 178 n n C4 C3 KC3 sing 179 n n C5 C1 KC3 sing 180 n n C3 N1 KC3 sing 181 n n C1 C2 KC3 sing 182 n n C8 C7 KC3 doub 183 n y C8 C9 KC3 sing 184 n y N1 C9 KC3 sing 185 n n N1 C2 KC3 sing 186 n n C7 C6 KC3 sing 187 n y C9 N2 KC3 doub 188 n y C6 N3 KC3 sing 189 n y C6 N4 KC3 doub 190 n y N2 N3 KC3 sing 191 n y N3 C10 KC3 sing 192 n y N4 N5 KC3 sing 193 n y C10 N5 KC3 doub 194 n y C10 C12 KC3 sing 195 n n C4 H1 KC3 sing 196 n n C4 H2 KC3 sing 197 n n C5 H3 KC3 sing 198 n n C11 H4 KC3 sing 199 n n C11 H5 KC3 sing 200 n n C11 H6 KC3 sing 201 n n C7 H7 KC3 sing 202 n n C8 H8 KC3 sing 203 n n C12 H9 KC3 sing 204 n n C12 H10 KC3 sing 205 n n C12 H11 KC3 sing 206 n n C3 H12 KC3 sing 207 n n C3 H13 KC3 sing 208 n n C1 H14 KC3 sing 209 n n C1 H15 KC3 sing 210 n n C2 H16 KC3 sing 211 n n C2 H17 KC3 sing 212 n n # _atom_sites.entry_id 8GPZ _atom_sites.fract_transf_matrix[1][1] 0.031096 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021134 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012572 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMT A 1 201 1 FMT FMT . C 2 FMT A 1 202 2 FMT FMT . D 3 NA A 1 203 1 NA NA . E 4 KC3 A 1 204 1 KC3 DRG . F 5 HOH A 1 301 72 HOH HOH . F 5 HOH A 2 302 88 HOH HOH . F 5 HOH A 3 303 84 HOH HOH . F 5 HOH A 4 304 9 HOH HOH . F 5 HOH A 5 305 2 HOH HOH . F 5 HOH A 6 306 69 HOH HOH . F 5 HOH A 7 307 48 HOH HOH . F 5 HOH A 8 308 44 HOH HOH . F 5 HOH A 9 309 43 HOH HOH . F 5 HOH A 10 310 36 HOH HOH . F 5 HOH A 11 311 80 HOH HOH . F 5 HOH A 12 312 4 HOH HOH . F 5 HOH A 13 313 10 HOH HOH . F 5 HOH A 14 314 40 HOH HOH . F 5 HOH A 15 315 18 HOH HOH . F 5 HOH A 16 316 92 HOH HOH . F 5 HOH A 17 317 58 HOH HOH . F 5 HOH A 18 318 33 HOH HOH . F 5 HOH A 19 319 39 HOH HOH . F 5 HOH A 20 320 17 HOH HOH . F 5 HOH A 21 321 74 HOH HOH . F 5 HOH A 22 322 25 HOH HOH . F 5 HOH A 23 323 5 HOH HOH . F 5 HOH A 24 324 96 HOH HOH . F 5 HOH A 25 325 26 HOH HOH . F 5 HOH A 26 326 7 HOH HOH . F 5 HOH A 27 327 12 HOH HOH . F 5 HOH A 28 328 56 HOH HOH . F 5 HOH A 29 329 53 HOH HOH . F 5 HOH A 30 330 20 HOH HOH . F 5 HOH A 31 331 14 HOH HOH . F 5 HOH A 32 332 28 HOH HOH . F 5 HOH A 33 333 75 HOH HOH . F 5 HOH A 34 334 51 HOH HOH . F 5 HOH A 35 335 65 HOH HOH . F 5 HOH A 36 336 60 HOH HOH . F 5 HOH A 37 337 8 HOH HOH . F 5 HOH A 38 338 23 HOH HOH . F 5 HOH A 39 339 94 HOH HOH . F 5 HOH A 40 340 79 HOH HOH . F 5 HOH A 41 341 47 HOH HOH . F 5 HOH A 42 342 31 HOH HOH . F 5 HOH A 43 343 37 HOH HOH . F 5 HOH A 44 344 67 HOH HOH . F 5 HOH A 45 345 15 HOH HOH . F 5 HOH A 46 346 42 HOH HOH . F 5 HOH A 47 347 87 HOH HOH . F 5 HOH A 48 348 63 HOH HOH . F 5 HOH A 49 349 32 HOH HOH . F 5 HOH A 50 350 49 HOH HOH . F 5 HOH A 51 351 59 HOH HOH . F 5 HOH A 52 352 21 HOH HOH . F 5 HOH A 53 353 46 HOH HOH . F 5 HOH A 54 354 16 HOH HOH . F 5 HOH A 55 355 76 HOH HOH . F 5 HOH A 56 356 19 HOH HOH . F 5 HOH A 57 357 62 HOH HOH . F 5 HOH A 58 358 35 HOH HOH . F 5 HOH A 59 359 64 HOH HOH . F 5 HOH A 60 360 11 HOH HOH . F 5 HOH A 61 361 57 HOH HOH . F 5 HOH A 62 362 29 HOH HOH . F 5 HOH A 63 363 50 HOH HOH . F 5 HOH A 64 364 70 HOH HOH . F 5 HOH A 65 365 89 HOH HOH . F 5 HOH A 66 366 22 HOH HOH . F 5 HOH A 67 367 24 HOH HOH . F 5 HOH A 68 368 45 HOH HOH . F 5 HOH A 69 369 95 HOH HOH . F 5 HOH A 70 370 97 HOH HOH . F 5 HOH A 71 371 66 HOH HOH . F 5 HOH A 72 372 73 HOH HOH . F 5 HOH A 73 373 41 HOH HOH . F 5 HOH A 74 374 54 HOH HOH . F 5 HOH A 75 375 13 HOH HOH . F 5 HOH A 76 376 81 HOH HOH . F 5 HOH A 77 377 91 HOH HOH . F 5 HOH A 78 378 52 HOH HOH . F 5 HOH A 79 379 86 HOH HOH . F 5 HOH A 80 380 68 HOH HOH . F 5 HOH A 81 381 77 HOH HOH . F 5 HOH A 82 382 85 HOH HOH . F 5 HOH A 83 383 78 HOH HOH . F 5 HOH A 84 384 93 HOH HOH . F 5 HOH A 85 385 90 HOH HOH . F 5 HOH A 86 386 38 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 KC3 . . . E 4 -23.877 -8.059 75.746 1 16.47 ? C4 KC3 204 A 1 HETATM 2 C C5 KC3 . . . E 4 -24.325 -6.705 76.322 1 20.52 ? C5 KC3 204 A 1 HETATM 3 C C6 KC3 . . . E 4 -19.794 -6.683 79.345 1 12.51 ? C6 KC3 204 A 1 HETATM 4 C C11 KC3 . . . E 4 -25.064 -5.907 75.247 1 19.92 ? C11 KC3 204 A 1 HETATM 5 C C7 KC3 . . . E 4 -19.744 -7.654 78.374 1 14.15 ? C7 KC3 204 A 1 HETATM 6 C C8 KC3 . . . E 4 -20.934 -8.205 77.926 1 15.78 ? C8 KC3 204 A 1 HETATM 7 C C9 KC3 . . . E 4 -22.126 -7.773 78.509 1 17.26 ? C9 KC3 204 A 1 HETATM 8 C C10 KC3 . . . E 4 -20.88 -5.413 80.714 1 11.63 ? C10 KC3 204 A 1 HETATM 9 C C12 KC3 . . . E 4 -22.043 -4.753 81.473 1 11.16 ? C12 KC3 204 A 1 HETATM 10 N N1 KC3 . . . E 4 -23.38 -8.295 78.025 1 17.26 ? N1 KC3 204 A 1 HETATM 11 N N2 KC3 . . . E 4 -22.111 -6.82 79.427 1 14.02 ? N2 KC3 204 A 1 HETATM 12 C C3 KC3 . . . E 4 -23.407 -9.051 76.806 1 13.78 ? C3 KC3 204 A 1 HETATM 13 N N3 KC3 . . . E 4 -20.913 -6.321 79.812 1 15.37 ? N3 KC3 204 A 1 HETATM 14 C C1 KC3 . . . E 4 -25.187 -6.839 77.588 1 17.66 ? C1 KC3 204 A 1 HETATM 15 C C2 KC3 . . . E 4 -24.648 -7.883 78.573 1 14.81 ? C2 KC3 204 A 1 HETATM 16 N N4 KC3 . . . E 4 -18.871 -5.951 79.978 1 11.53 ? N4 KC3 204 A 1 HETATM 17 N N5 KC3 . . . E 4 -19.598 -5.113 80.867 1 12.38 ? N5 KC3 204 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 350 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 17 #