data_8GQ0 # _model_server_result.job_id ceQ5qKKdHfA7QOSxaV0biw _model_server_result.datetime_utc '2024-10-19 03:57:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8gq0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 8GQ0 # _exptl.entry_id 8GQ0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8GQ0 _cell.length_a 32.281 _cell.length_b 47.576 _cell.length_c 79.344 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8GQ0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OH TYR 23 A TYR 65 1_555 F NA NA . A NA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc2 A O VAL 48 A VAL 90 1_555 G NA NA . A NA 206 4_447 ? ? ? ? ? ? ? ? ? ? ? ? 2.678 ? metalc ? metalc3 A O LYS 49 A LYS 91 1_555 G NA NA . A NA 206 4_447 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc4 A OD1 ASN 51 A ASN 93 1_555 G NA NA . A NA 206 4_447 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc5 A O ILE 96 A ILE 138 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc6 A O ASN 98 A ASN 140 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc7 A O LYS 118 A LYS 160 1_555 F NA NA . A NA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc8 A O GLU 121 A GLU 163 1_555 F NA NA . A NA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc9 F NA NA . A NA 205 1_555 I O2 GOL . A GOL 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc10 F NA NA . A NA 205 1_555 K O HOH . A HOH 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc11 G NA NA . A NA 206 1_555 K O HOH . A HOH 309 4_557 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 83 n n C O2 FMT sing 84 n n C H FMT sing 85 n n O2 HO2 FMT sing 86 n n # _atom_sites.entry_id 8GQ0 _atom_sites.fract_transf_matrix[1][1] 0.030978 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021019 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012603 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMT A 1 201 1 FMT FMT . C 2 FMT A 1 202 2 FMT FMT . D 2 FMT A 1 203 3 FMT FMT . E 2 FMT A 1 204 4 FMT FMT . F 3 NA A 1 205 1 NA NA . G 3 NA A 1 206 2 NA NA . H 4 GOL A 1 207 1 GOL GOL . I 4 GOL A 1 208 2 GOL GOL . J 5 KCL A 1 209 1 KCL DRG . K 6 HOH A 1 301 94 HOH HOH . K 6 HOH A 2 302 97 HOH HOH . K 6 HOH A 3 303 19 HOH HOH . K 6 HOH A 4 304 62 HOH HOH . K 6 HOH A 5 305 37 HOH HOH . K 6 HOH A 6 306 90 HOH HOH . K 6 HOH A 7 307 39 HOH HOH . K 6 HOH A 8 308 61 HOH HOH . K 6 HOH A 9 309 13 HOH HOH . K 6 HOH A 10 310 43 HOH HOH . K 6 HOH A 11 311 41 HOH HOH . K 6 HOH A 12 312 53 HOH HOH . K 6 HOH A 13 313 83 HOH HOH . K 6 HOH A 14 314 27 HOH HOH . K 6 HOH A 15 315 76 HOH HOH . K 6 HOH A 16 316 7 HOH HOH . K 6 HOH A 17 317 89 HOH HOH . K 6 HOH A 18 318 16 HOH HOH . K 6 HOH A 19 319 46 HOH HOH . K 6 HOH A 20 320 86 HOH HOH . K 6 HOH A 21 321 22 HOH HOH . K 6 HOH A 22 322 59 HOH HOH . K 6 HOH A 23 323 74 HOH HOH . K 6 HOH A 24 324 30 HOH HOH . K 6 HOH A 25 325 35 HOH HOH . K 6 HOH A 26 326 2 HOH HOH . K 6 HOH A 27 327 84 HOH HOH . K 6 HOH A 28 328 44 HOH HOH . K 6 HOH A 29 329 32 HOH HOH . K 6 HOH A 30 330 25 HOH HOH . K 6 HOH A 31 331 15 HOH HOH . K 6 HOH A 32 332 4 HOH HOH . K 6 HOH A 33 333 9 HOH HOH . K 6 HOH A 34 334 8 HOH HOH . K 6 HOH A 35 335 38 HOH HOH . K 6 HOH A 36 336 24 HOH HOH . K 6 HOH A 37 337 23 HOH HOH . K 6 HOH A 38 338 29 HOH HOH . K 6 HOH A 39 339 6 HOH HOH . K 6 HOH A 40 340 55 HOH HOH . K 6 HOH A 41 341 20 HOH HOH . K 6 HOH A 42 342 75 HOH HOH . K 6 HOH A 43 343 31 HOH HOH . K 6 HOH A 44 344 92 HOH HOH . K 6 HOH A 45 345 12 HOH HOH . K 6 HOH A 46 346 52 HOH HOH . K 6 HOH A 47 347 81 HOH HOH . K 6 HOH A 48 348 71 HOH HOH . K 6 HOH A 49 349 91 HOH HOH . K 6 HOH A 50 350 98 HOH HOH . K 6 HOH A 51 351 5 HOH HOH . K 6 HOH A 52 352 10 HOH HOH . K 6 HOH A 53 353 64 HOH HOH . K 6 HOH A 54 354 82 HOH HOH . K 6 HOH A 55 355 49 HOH HOH . K 6 HOH A 56 356 63 HOH HOH . K 6 HOH A 57 357 78 HOH HOH . K 6 HOH A 58 358 56 HOH HOH . K 6 HOH A 59 359 36 HOH HOH . K 6 HOH A 60 360 69 HOH HOH . K 6 HOH A 61 361 54 HOH HOH . K 6 HOH A 62 362 34 HOH HOH . K 6 HOH A 63 363 26 HOH HOH . K 6 HOH A 64 364 47 HOH HOH . K 6 HOH A 65 365 101 HOH HOH . K 6 HOH A 66 366 21 HOH HOH . K 6 HOH A 67 367 14 HOH HOH . K 6 HOH A 68 368 60 HOH HOH . K 6 HOH A 69 369 17 HOH HOH . K 6 HOH A 70 370 11 HOH HOH . K 6 HOH A 71 371 28 HOH HOH . K 6 HOH A 72 372 42 HOH HOH . K 6 HOH A 73 373 67 HOH HOH . K 6 HOH A 74 374 40 HOH HOH . K 6 HOH A 75 375 33 HOH HOH . K 6 HOH A 76 376 51 HOH HOH . K 6 HOH A 77 377 87 HOH HOH . K 6 HOH A 78 378 58 HOH HOH . K 6 HOH A 79 379 80 HOH HOH . K 6 HOH A 80 380 65 HOH HOH . K 6 HOH A 81 381 93 HOH HOH . K 6 HOH A 82 382 95 HOH HOH . K 6 HOH A 83 383 68 HOH HOH . K 6 HOH A 84 384 85 HOH HOH . K 6 HOH A 85 385 96 HOH HOH . K 6 HOH A 86 386 100 HOH HOH . K 6 HOH A 87 387 88 HOH HOH . K 6 HOH A 88 388 99 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . D 2 -20.354 -7.101 73.447 1 18.6 ? C FMT 203 A 1 HETATM 2 O O1 FMT . . . D 2 -20.475 -6.04 72.817 1 14.46 ? O1 FMT 203 A 1 HETATM 3 O O2 FMT . . . D 2 -19.285 -7.505 73.936 1 30.33 ? O2 FMT 203 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 3 #