data_8GQ0
#
_model_server_result.job_id            b2jM3XA6ZgWM9ghosjkFCQ 
_model_server_result.datetime_utc      '2024-10-19 03:49:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8gq0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":208}' 
#
_entry.id    8GQ0 
#
_exptl.entry_id    8GQ0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8GQ0 
_cell.length_a            32.281 
_cell.length_b            47.576 
_cell.length_c            79.344 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8GQ0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 H N N 
? 4 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OH TYR 23 A TYR 65 1_555 F NA NA . A NA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? 
metalc ? metalc2 A O VAL 48 A VAL 90 1_555 G NA NA . A NA 206 4_447 ? ? ? ? ? ? ? ? ? ? ? ? 2.678 ? 
metalc ? metalc3 A O LYS 49 A LYS 91 1_555 G NA NA . A NA 206 4_447 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? 
metalc ? metalc4 A OD1 ASN 51 A ASN 93 1_555 G NA NA . A NA 206 4_447 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? 
metalc ? metalc5 A O ILE 96 A ILE 138 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc6 A O ASN 98 A ASN 140 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? 
metalc ? metalc7 A O LYS 118 A LYS 160 1_555 F NA NA . A NA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? 
metalc ? metalc8 A O GLU 121 A GLU 163 1_555 F NA NA . A NA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? 
metalc ? metalc9 F NA NA . A NA 205 1_555 I O2 GOL . A GOL 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? 
metalc ? metalc10 F NA NA . A NA 205 1_555 K O HOH . A HOH 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? 
metalc ? metalc11 G NA NA . A NA 206 1_555 K O HOH . A HOH 309 4_557 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 133 n n 
C1 C2 GOL sing 134 n n 
C1 H11 GOL sing 135 n n 
C1 H12 GOL sing 136 n n 
O1 HO1 GOL sing 137 n n 
C2 O2 GOL sing 138 n n 
C2 C3 GOL sing 139 n n 
C2 H2 GOL sing 140 n n 
O2 HO2 GOL sing 141 n n 
C3 O3 GOL sing 142 n n 
C3 H31 GOL sing 143 n n 
C3 H32 GOL sing 144 n n 
O3 HO3 GOL sing 145 n n 
#
_atom_sites.entry_id                     8GQ0 
_atom_sites.fract_transf_matrix[1][1]    0.030978 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021019 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012603 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FMT A 1 201 1 FMT FMT . 
C 2 FMT A 1 202 2 FMT FMT . 
D 2 FMT A 1 203 3 FMT FMT . 
E 2 FMT A 1 204 4 FMT FMT . 
F 3 NA A 1 205 1 NA NA . 
G 3 NA A 1 206 2 NA NA . 
H 4 GOL A 1 207 1 GOL GOL . 
I 4 GOL A 1 208 2 GOL GOL . 
J 5 KCL A 1 209 1 KCL DRG . 
K 6 HOH A 1 301 94 HOH HOH . 
K 6 HOH A 2 302 97 HOH HOH . 
K 6 HOH A 3 303 19 HOH HOH . 
K 6 HOH A 4 304 62 HOH HOH . 
K 6 HOH A 5 305 37 HOH HOH . 
K 6 HOH A 6 306 90 HOH HOH . 
K 6 HOH A 7 307 39 HOH HOH . 
K 6 HOH A 8 308 61 HOH HOH . 
K 6 HOH A 9 309 13 HOH HOH . 
K 6 HOH A 10 310 43 HOH HOH . 
K 6 HOH A 11 311 41 HOH HOH . 
K 6 HOH A 12 312 53 HOH HOH . 
K 6 HOH A 13 313 83 HOH HOH . 
K 6 HOH A 14 314 27 HOH HOH . 
K 6 HOH A 15 315 76 HOH HOH . 
K 6 HOH A 16 316 7 HOH HOH . 
K 6 HOH A 17 317 89 HOH HOH . 
K 6 HOH A 18 318 16 HOH HOH . 
K 6 HOH A 19 319 46 HOH HOH . 
K 6 HOH A 20 320 86 HOH HOH . 
K 6 HOH A 21 321 22 HOH HOH . 
K 6 HOH A 22 322 59 HOH HOH . 
K 6 HOH A 23 323 74 HOH HOH . 
K 6 HOH A 24 324 30 HOH HOH . 
K 6 HOH A 25 325 35 HOH HOH . 
K 6 HOH A 26 326 2 HOH HOH . 
K 6 HOH A 27 327 84 HOH HOH . 
K 6 HOH A 28 328 44 HOH HOH . 
K 6 HOH A 29 329 32 HOH HOH . 
K 6 HOH A 30 330 25 HOH HOH . 
K 6 HOH A 31 331 15 HOH HOH . 
K 6 HOH A 32 332 4 HOH HOH . 
K 6 HOH A 33 333 9 HOH HOH . 
K 6 HOH A 34 334 8 HOH HOH . 
K 6 HOH A 35 335 38 HOH HOH . 
K 6 HOH A 36 336 24 HOH HOH . 
K 6 HOH A 37 337 23 HOH HOH . 
K 6 HOH A 38 338 29 HOH HOH . 
K 6 HOH A 39 339 6 HOH HOH . 
K 6 HOH A 40 340 55 HOH HOH . 
K 6 HOH A 41 341 20 HOH HOH . 
K 6 HOH A 42 342 75 HOH HOH . 
K 6 HOH A 43 343 31 HOH HOH . 
K 6 HOH A 44 344 92 HOH HOH . 
K 6 HOH A 45 345 12 HOH HOH . 
K 6 HOH A 46 346 52 HOH HOH . 
K 6 HOH A 47 347 81 HOH HOH . 
K 6 HOH A 48 348 71 HOH HOH . 
K 6 HOH A 49 349 91 HOH HOH . 
K 6 HOH A 50 350 98 HOH HOH . 
K 6 HOH A 51 351 5 HOH HOH . 
K 6 HOH A 52 352 10 HOH HOH . 
K 6 HOH A 53 353 64 HOH HOH . 
K 6 HOH A 54 354 82 HOH HOH . 
K 6 HOH A 55 355 49 HOH HOH . 
K 6 HOH A 56 356 63 HOH HOH . 
K 6 HOH A 57 357 78 HOH HOH . 
K 6 HOH A 58 358 56 HOH HOH . 
K 6 HOH A 59 359 36 HOH HOH . 
K 6 HOH A 60 360 69 HOH HOH . 
K 6 HOH A 61 361 54 HOH HOH . 
K 6 HOH A 62 362 34 HOH HOH . 
K 6 HOH A 63 363 26 HOH HOH . 
K 6 HOH A 64 364 47 HOH HOH . 
K 6 HOH A 65 365 101 HOH HOH . 
K 6 HOH A 66 366 21 HOH HOH . 
K 6 HOH A 67 367 14 HOH HOH . 
K 6 HOH A 68 368 60 HOH HOH . 
K 6 HOH A 69 369 17 HOH HOH . 
K 6 HOH A 70 370 11 HOH HOH . 
K 6 HOH A 71 371 28 HOH HOH . 
K 6 HOH A 72 372 42 HOH HOH . 
K 6 HOH A 73 373 67 HOH HOH . 
K 6 HOH A 74 374 40 HOH HOH . 
K 6 HOH A 75 375 33 HOH HOH . 
K 6 HOH A 76 376 51 HOH HOH . 
K 6 HOH A 77 377 87 HOH HOH . 
K 6 HOH A 78 378 58 HOH HOH . 
K 6 HOH A 79 379 80 HOH HOH . 
K 6 HOH A 80 380 65 HOH HOH . 
K 6 HOH A 81 381 93 HOH HOH . 
K 6 HOH A 82 382 95 HOH HOH . 
K 6 HOH A 83 383 68 HOH HOH . 
K 6 HOH A 84 384 85 HOH HOH . 
K 6 HOH A 85 385 96 HOH HOH . 
K 6 HOH A 86 386 100 HOH HOH . 
K 6 HOH A 87 387 88 HOH HOH . 
K 6 HOH A 88 388 99 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . I 4 -29.795 20.598 83.888 1 16.82 ? C1 GOL 208 A 1 
HETATM 2 O O1 GOL . . . I 4 -29.976 19.521 84.782 1 18.11 ? O1 GOL 208 A 1 
HETATM 3 C C2 GOL . . . I 4 -28.274 20.703 83.477 1 21.65 ? C2 GOL 208 A 1 
HETATM 4 O O2 GOL . . . I 4 -27.488 21.29 84.465 1 29.43 ? O2 GOL 208 A 1 
HETATM 5 C C3 GOL . . . I 4 -27.826 19.257 83.091 1 21.4 ? C3 GOL 208 A 1 
HETATM 6 O O3 GOL . . . I 4 -27.59 19.223 81.704 1 29.89 ? O3 GOL 208 A 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#