data_8GR6
#
_model_server_result.job_id            BqUp16uX7wBWeGfOcel-Fw 
_model_server_result.datetime_utc      '2025-01-16 08:51:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8gr6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":2101}' 
#
_entry.id    8GR6 
#
_exptl.entry_id    8GR6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8GR6 
_cell.length_a            140.019 
_cell.length_b            140.019 
_cell.length_c            103.625 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8GR6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C SER 203 A SER 216 1_555 A N MHS 204 A MHS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale2 A C MHS 204 A MHS 217 1_555 A N ARG 205 A ARG 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
metalc ? metalc1 A O ASN 52 A ASN 65 1_555 E NA NA . A NA 2104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.752 ? 
metalc ? metalc2 A O GLU 56 A GLU 69 1_555 D NA NA . A NA 2103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.718 ? 
metalc ? metalc3 A OG SER 119 A SER 132 1_555 E NA NA . A NA 2104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.855 ? 
metalc ? metalc4 A O GLY 126 A GLY 139 1_555 E NA NA . A NA 2104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.736 ? 
metalc ? metalc5 A OE2 GLU 175 A GLU 188 1_555 C ZN ZN . A ZN 2102 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2 ? 
metalc ? metalc6 A NE2 MHS 204 A MHS 217 1_555 C ZN ZN . A ZN 2102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? 
metalc ? metalc7 D NA NA . A NA 2103 1_555 F O HOH . A HOH 2206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.858 ? 
metalc ? metalc8 D NA NA . A NA 2103 1_555 F O HOH . A HOH 2233 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.776 ? 
metalc ? metalc9 D NA NA . A NA 2103 1_555 F O HOH . A HOH 2236 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.631 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     8GR6 
_atom_sites.fract_transf_matrix[1][1]    0.007142 
_atom_sites.fract_transf_matrix[1][2]    0.004123 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008247 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00965 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 2101 2101 EDO EDO . 
C 3 ZN A 1 2102 2201 ZN ZN . 
D 4 NA A 1 2103 1 NA NA . 
E 4 NA A 1 2104 2 NA NA . 
F 5 HOH A 1 2201 147 HOH HOH . 
F 5 HOH A 2 2202 169 HOH HOH . 
F 5 HOH A 3 2203 146 HOH HOH . 
F 5 HOH A 4 2204 128 HOH HOH . 
F 5 HOH A 5 2205 137 HOH HOH . 
F 5 HOH A 6 2206 3 HOH HOH . 
F 5 HOH A 7 2207 131 HOH HOH . 
F 5 HOH A 8 2208 45 HOH HOH . 
F 5 HOH A 9 2209 19 HOH HOH . 
F 5 HOH A 10 2210 2 HOH HOH . 
F 5 HOH A 11 2211 40 HOH HOH . 
F 5 HOH A 12 2212 49 HOH HOH . 
F 5 HOH A 13 2213 80 HOH HOH . 
F 5 HOH A 14 2214 16 HOH HOH . 
F 5 HOH A 15 2215 50 HOH HOH . 
F 5 HOH A 16 2216 127 HOH HOH . 
F 5 HOH A 17 2217 4 HOH HOH . 
F 5 HOH A 18 2218 1 HOH HOH . 
F 5 HOH A 19 2219 139 HOH HOH . 
F 5 HOH A 20 2220 164 HOH HOH . 
F 5 HOH A 21 2221 11 HOH HOH . 
F 5 HOH A 22 2222 22 HOH HOH . 
F 5 HOH A 23 2223 50 HOH HOH . 
F 5 HOH A 24 2224 41 HOH HOH . 
F 5 HOH A 25 2225 5 HOH HOH . 
F 5 HOH A 26 2226 1 HOH HOH . 
F 5 HOH A 27 2227 8 HOH HOH . 
F 5 HOH A 28 2228 20 HOH HOH . 
F 5 HOH A 29 2229 14 HOH HOH . 
F 5 HOH A 30 2230 6 HOH HOH . 
F 5 HOH A 31 2231 153 HOH HOH . 
F 5 HOH A 32 2232 9 HOH HOH . 
F 5 HOH A 33 2233 140 HOH HOH . 
F 5 HOH A 34 2234 17 HOH HOH . 
F 5 HOH A 35 2235 11 HOH HOH . 
F 5 HOH A 36 2236 29 HOH HOH . 
F 5 HOH A 37 2237 15 HOH HOH . 
F 5 HOH A 38 2238 33 HOH HOH . 
F 5 HOH A 39 2239 54 HOH HOH . 
F 5 HOH A 40 2240 130 HOH HOH . 
F 5 HOH A 41 2241 31 HOH HOH . 
F 5 HOH A 42 2242 34 HOH HOH . 
F 5 HOH A 43 2243 27 HOH HOH . 
F 5 HOH A 44 2244 141 HOH HOH . 
F 5 HOH A 45 2245 136 HOH HOH . 
F 5 HOH A 46 2246 27 HOH HOH . 
F 5 HOH A 47 2247 71 HOH HOH . 
F 5 HOH A 48 2248 54 HOH HOH . 
F 5 HOH A 49 2249 138 HOH HOH . 
F 5 HOH A 50 2250 162 HOH HOH . 
F 5 HOH A 51 2251 6 HOH HOH . 
F 5 HOH A 52 2252 12 HOH HOH . 
F 5 HOH A 53 2253 55 HOH HOH . 
F 5 HOH A 54 2254 53 HOH HOH . 
F 5 HOH A 55 2255 52 HOH HOH . 
F 5 HOH A 56 2256 51 HOH HOH . 
F 5 HOH A 57 2257 154 HOH HOH . 
F 5 HOH A 58 2258 122 HOH HOH . 
F 5 HOH A 59 2259 2 HOH HOH . 
F 5 HOH A 60 2260 163 HOH HOH . 
F 5 HOH A 61 2261 13 HOH HOH . 
F 5 HOH A 62 2262 29 HOH HOH . 
F 5 HOH A 63 2263 9 HOH HOH . 
F 5 HOH A 64 2264 10 HOH HOH . 
F 5 HOH A 65 2265 155 HOH HOH . 
F 5 HOH A 66 2266 18 HOH HOH . 
F 5 HOH A 67 2267 160 HOH HOH . 
F 5 HOH A 68 2268 149 HOH HOH . 
F 5 HOH A 69 2269 161 HOH HOH . 
F 5 HOH A 70 2270 24 HOH HOH . 
F 5 HOH A 71 2271 172 HOH HOH . 
F 5 HOH A 72 2272 143 HOH HOH . 
F 5 HOH A 73 2273 157 HOH HOH . 
F 5 HOH A 74 2274 171 HOH HOH . 
F 5 HOH A 75 2275 38 HOH HOH . 
F 5 HOH A 76 2276 150 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . B 2 0.213 -10.928 -0.915 1 54.75 ? C1 EDO 2101 A 1 
HETATM 2 O O1 EDO . . . B 2 1.21 -10.419 -1.8 1 56.93 ? O1 EDO 2101 A 1 
HETATM 3 C C2 EDO . . . B 2 0.784 -11.453 0.353 1 54.31 ? C2 EDO 2101 A 1 
HETATM 4 O O2 EDO . . . B 2 2.201 -11.634 0.284 1 51.75 ? O2 EDO 2101 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           4 
#