data_8GRJ
#
_model_server_result.job_id            x7iC5oTom7dcbkeLtRrL5w 
_model_server_result.datetime_utc      '2024-10-20 01:33:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8grj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":702}' 
#
_entry.id    8GRJ 
#
_exptl.entry_id    8GRJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              295.795 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FE3-S4 CLUSTER' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8GRJ 
_cell.length_a            111.235 
_cell.length_b            111.235 
_cell.length_c            527.106 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8GRJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,K,L 1 1 
C,D,H,I,J,M,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 152 A CYS 152 1_555 B SG CYS 213 B CYS 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
disulf ? disulf2 C SG CYS 152 C CYS 152 1_555 D SG CYS 213 D CYS 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
covale ? covale1 B NE2 HIS 105 B HIS 105 1_555 E C8M FAD . B FAD 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.545 ? 
covale ? covale2 D NE2 HIS 105 D HIS 105 1_555 H C8M FAD . D FAD 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.583 ? 
metalc ? metalc1 B SG CYS 212 B CYS 212 1_555 F FE1 F3S . B F3S 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? 
metalc ? metalc2 B SG CYS 218 B CYS 218 1_555 F FE4 F3S . B F3S 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? 
metalc ? metalc3 B SG CYS 222 B CYS 222 1_555 F FE3 F3S . B F3S 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? 
metalc ? metalc4 D SG CYS 212 D CYS 212 1_555 I FE1 F3S . D F3S 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? 
metalc ? metalc5 D SG CYS 218 D CYS 218 1_555 I FE4 F3S . D F3S 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? 
metalc ? metalc6 D SG CYS 222 D CYS 222 1_555 I FE3 F3S . D F3S 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? 
#
_chem_comp.formula           'Fe3 S4' 
_chem_comp.formula_weight    295.795 
_chem_comp.id                F3S 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FE3-S4 CLUSTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
FE1 S1 F3S sing 83 n n 
FE1 S2 F3S sing 84 n n 
FE1 S3 F3S sing 85 n n 
FE3 S1 F3S sing 86 n n 
FE3 S3 F3S sing 87 n n 
FE3 S4 F3S sing 88 n n 
FE4 S2 F3S sing 89 n n 
FE4 S3 F3S sing 90 n n 
FE4 S4 F3S sing 91 n n 
#
_atom_sites.entry_id                     8GRJ 
_atom_sites.fract_transf_matrix[1][1]    0.00899 
_atom_sites.fract_transf_matrix[1][2]    0.00519 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010381 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.001897 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 FAD B 1 701 701 FAD FAD . 
F 4 F3S B 1 702 1 F3S F3S . 
G 5 LGC B 1 703 1 LGC LGC . 
H 3 FAD D 1 701 701 FAD FAD . 
I 4 F3S D 1 702 2 F3S F3S . 
J 5 LGC D 1 703 2 LGC LGC . 
K 6 HOH A 1 201 64 HOH HOH . 
K 6 HOH A 2 202 21 HOH HOH . 
K 6 HOH A 3 203 12 HOH HOH . 
K 6 HOH A 4 204 137 HOH HOH . 
K 6 HOH A 5 205 144 HOH HOH . 
K 6 HOH A 6 206 46 HOH HOH . 
K 6 HOH A 7 207 127 HOH HOH . 
K 6 HOH A 8 208 58 HOH HOH . 
K 6 HOH A 9 209 45 HOH HOH . 
K 6 HOH A 10 210 116 HOH HOH . 
K 6 HOH A 11 211 33 HOH HOH . 
K 6 HOH A 12 212 134 HOH HOH . 
K 6 HOH A 13 213 128 HOH HOH . 
K 6 HOH A 14 214 31 HOH HOH . 
L 6 HOH B 1 801 36 HOH HOH . 
L 6 HOH B 2 802 108 HOH HOH . 
L 6 HOH B 3 803 62 HOH HOH . 
L 6 HOH B 4 804 104 HOH HOH . 
L 6 HOH B 5 805 25 HOH HOH . 
L 6 HOH B 6 806 67 HOH HOH . 
L 6 HOH B 7 807 81 HOH HOH . 
L 6 HOH B 8 808 11 HOH HOH . 
L 6 HOH B 9 809 52 HOH HOH . 
L 6 HOH B 10 810 105 HOH HOH . 
L 6 HOH B 11 811 20 HOH HOH . 
L 6 HOH B 12 812 90 HOH HOH . 
L 6 HOH B 13 813 23 HOH HOH . 
L 6 HOH B 14 814 28 HOH HOH . 
L 6 HOH B 15 815 99 HOH HOH . 
L 6 HOH B 16 816 110 HOH HOH . 
L 6 HOH B 17 817 101 HOH HOH . 
L 6 HOH B 18 818 133 HOH HOH . 
L 6 HOH B 19 819 132 HOH HOH . 
L 6 HOH B 20 820 102 HOH HOH . 
L 6 HOH B 21 821 35 HOH HOH . 
L 6 HOH B 22 822 135 HOH HOH . 
L 6 HOH B 23 823 53 HOH HOH . 
L 6 HOH B 24 824 16 HOH HOH . 
L 6 HOH B 25 825 41 HOH HOH . 
L 6 HOH B 26 826 82 HOH HOH . 
L 6 HOH B 27 827 129 HOH HOH . 
L 6 HOH B 28 828 29 HOH HOH . 
L 6 HOH B 29 829 76 HOH HOH . 
L 6 HOH B 30 830 97 HOH HOH . 
L 6 HOH B 31 831 8 HOH HOH . 
L 6 HOH B 32 832 22 HOH HOH . 
L 6 HOH B 33 833 24 HOH HOH . 
L 6 HOH B 34 834 100 HOH HOH . 
L 6 HOH B 35 835 74 HOH HOH . 
L 6 HOH B 36 836 95 HOH HOH . 
L 6 HOH B 37 837 83 HOH HOH . 
L 6 HOH B 38 838 65 HOH HOH . 
L 6 HOH B 39 839 70 HOH HOH . 
L 6 HOH B 40 840 88 HOH HOH . 
L 6 HOH B 41 841 75 HOH HOH . 
L 6 HOH B 42 842 142 HOH HOH . 
L 6 HOH B 43 843 59 HOH HOH . 
L 6 HOH B 44 844 87 HOH HOH . 
L 6 HOH B 45 845 111 HOH HOH . 
L 6 HOH B 46 846 19 HOH HOH . 
L 6 HOH B 47 847 85 HOH HOH . 
L 6 HOH B 48 848 79 HOH HOH . 
L 6 HOH B 49 849 54 HOH HOH . 
L 6 HOH B 50 850 44 HOH HOH . 
L 6 HOH B 51 851 18 HOH HOH . 
L 6 HOH B 52 852 119 HOH HOH . 
L 6 HOH B 53 853 124 HOH HOH . 
L 6 HOH B 54 854 91 HOH HOH . 
L 6 HOH B 55 855 68 HOH HOH . 
L 6 HOH B 56 856 86 HOH HOH . 
L 6 HOH B 57 857 72 HOH HOH . 
L 6 HOH B 58 858 7 HOH HOH . 
L 6 HOH B 59 859 80 HOH HOH . 
L 6 HOH B 60 860 112 HOH HOH . 
L 6 HOH B 61 861 103 HOH HOH . 
L 6 HOH B 62 862 10 HOH HOH . 
L 6 HOH B 63 863 113 HOH HOH . 
L 6 HOH B 64 864 121 HOH HOH . 
L 6 HOH B 65 865 130 HOH HOH . 
M 6 HOH C 1 201 148 HOH HOH . 
M 6 HOH C 2 202 5 HOH HOH . 
M 6 HOH C 3 203 15 HOH HOH . 
M 6 HOH C 4 204 57 HOH HOH . 
M 6 HOH C 5 205 131 HOH HOH . 
M 6 HOH C 6 206 30 HOH HOH . 
M 6 HOH C 7 207 6 HOH HOH . 
M 6 HOH C 8 208 123 HOH HOH . 
M 6 HOH C 9 209 63 HOH HOH . 
M 6 HOH C 10 210 38 HOH HOH . 
M 6 HOH C 11 211 139 HOH HOH . 
M 6 HOH C 12 212 149 HOH HOH . 
N 6 HOH D 1 801 125 HOH HOH . 
N 6 HOH D 2 802 42 HOH HOH . 
N 6 HOH D 3 803 17 HOH HOH . 
N 6 HOH D 4 804 107 HOH HOH . 
N 6 HOH D 5 805 26 HOH HOH . 
N 6 HOH D 6 806 9 HOH HOH . 
N 6 HOH D 7 807 126 HOH HOH . 
N 6 HOH D 8 808 1 HOH HOH . 
N 6 HOH D 9 809 27 HOH HOH . 
N 6 HOH D 10 810 34 HOH HOH . 
N 6 HOH D 11 811 43 HOH HOH . 
N 6 HOH D 12 812 73 HOH HOH . 
N 6 HOH D 13 813 93 HOH HOH . 
N 6 HOH D 14 814 106 HOH HOH . 
N 6 HOH D 15 815 14 HOH HOH . 
N 6 HOH D 16 816 13 HOH HOH . 
N 6 HOH D 17 817 98 HOH HOH . 
N 6 HOH D 18 818 55 HOH HOH . 
N 6 HOH D 19 819 122 HOH HOH . 
N 6 HOH D 20 820 37 HOH HOH . 
N 6 HOH D 21 821 114 HOH HOH . 
N 6 HOH D 22 822 120 HOH HOH . 
N 6 HOH D 23 823 49 HOH HOH . 
N 6 HOH D 24 824 77 HOH HOH . 
N 6 HOH D 25 825 40 HOH HOH . 
N 6 HOH D 26 826 61 HOH HOH . 
N 6 HOH D 27 827 115 HOH HOH . 
N 6 HOH D 28 828 94 HOH HOH . 
N 6 HOH D 29 829 51 HOH HOH . 
N 6 HOH D 30 830 143 HOH HOH . 
N 6 HOH D 31 831 92 HOH HOH . 
N 6 HOH D 32 832 66 HOH HOH . 
N 6 HOH D 33 833 147 HOH HOH . 
N 6 HOH D 34 834 60 HOH HOH . 
N 6 HOH D 35 835 3 HOH HOH . 
N 6 HOH D 36 836 118 HOH HOH . 
N 6 HOH D 37 837 84 HOH HOH . 
N 6 HOH D 38 838 47 HOH HOH . 
N 6 HOH D 39 839 78 HOH HOH . 
N 6 HOH D 40 840 4 HOH HOH . 
N 6 HOH D 41 841 32 HOH HOH . 
N 6 HOH D 42 842 2 HOH HOH . 
N 6 HOH D 43 843 50 HOH HOH . 
N 6 HOH D 44 844 138 HOH HOH . 
N 6 HOH D 45 845 146 HOH HOH . 
N 6 HOH D 46 846 48 HOH HOH . 
N 6 HOH D 47 847 117 HOH HOH . 
N 6 HOH D 48 848 56 HOH HOH . 
N 6 HOH D 49 849 140 HOH HOH . 
N 6 HOH D 50 850 69 HOH HOH . 
N 6 HOH D 51 851 89 HOH HOH . 
N 6 HOH D 52 852 39 HOH HOH . 
N 6 HOH D 53 853 136 HOH HOH . 
N 6 HOH D 54 854 109 HOH HOH . 
N 6 HOH D 55 855 71 HOH HOH . 
N 6 HOH D 56 856 96 HOH HOH . 
N 6 HOH D 57 857 145 HOH HOH . 
N 6 HOH D 58 858 141 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 FE FE1 F3S . . . I 4 56.347 76.12 259.532 1 26.72 ? FE1 F3S 702 D 1 
HETATM 2 FE FE3 F3S . . . I 4 57.923 76.252 257.009 1 29.47 ? FE3 F3S 702 D 1 
HETATM 3 FE FE4 F3S . . . I 4 56.119 74.134 257.567 1 26.46 ? FE4 F3S 702 D 1 
HETATM 4 S S1 F3S . . . I 4 56.909 77.815 258.219 1 27.67 ? S1 F3S 702 D 1 
HETATM 5 S S2 F3S . . . I 4 54.759 74.674 259.191 1 25.65 ? S2 F3S 702 D 1 
HETATM 6 S S3 F3S . . . I 4 57.896 74.812 258.67 1 23.42 ? S3 F3S 702 D 1 
HETATM 7 S S4 F3S . . . I 4 56.807 74.97 255.68 1 28.2 ? S4 F3S 702 D 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           7 
#