data_8GRN # _model_server_result.job_id v5kDvEwMRPPauTRFzNabBg _model_server_result.datetime_utc '2024-11-21 14:11:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8grn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 8GRN # _exptl.entry_id 8GRN _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 468.585 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[1-MYRISTOYL-GLYCEROL-3-YL]PHOSPHONYLCHOLINE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C22 H47 N O7 P 1' _chem_comp.formula_weight 468.585 _chem_comp.id LPC _chem_comp.mon_nstd_flag . _chem_comp.name '[1-MYRISTOYL-GLYCEROL-3-YL]PHOSPHONYLCHOLINE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C0A N1 LPC sing 192 n n C0A H0A1 LPC sing 193 n n C0A H0A2 LPC sing 194 n n C0A H0A3 LPC sing 195 n n C0B N1 LPC sing 196 n n C0B H0B1 LPC sing 197 n n C0B H0B2 LPC sing 198 n n C0B H0B3 LPC sing 199 n n C0C N1 LPC sing 200 n n C0C H0C1 LPC sing 201 n n C0C H0C2 LPC sing 202 n n C0C H0C3 LPC sing 203 n n N1 C2 LPC sing 204 n n C2 C3 LPC sing 205 n n C2 H21 LPC sing 206 n n C2 H22 LPC sing 207 n n C3 O4 LPC sing 208 n n C3 H31 LPC sing 209 n n C3 H32 LPC sing 210 n n O4 P5 LPC sing 211 n n P5 O5A LPC sing 212 n n P5 O5B LPC doub 213 n n P5 O6 LPC sing 214 n n O5A HO5A LPC sing 215 n n O6 C7 LPC sing 216 n n C7 C8 LPC sing 217 n n C7 H71 LPC sing 218 n n C7 H72 LPC sing 219 n n C8 O8 LPC sing 220 n n C8 C9 LPC sing 221 n n C8 H8 LPC sing 222 n n O8 HO8 LPC sing 223 n n C9 OQ2 LPC sing 224 n n C9 H91 LPC sing 225 n n C9 H92 LPC sing 226 n n OQ1 CA LPC doub 227 n n OQ2 CA LPC sing 228 n n CA CB LPC sing 229 n n CB CC LPC sing 230 n n CB HB1 LPC sing 231 n n CB HB2 LPC sing 232 n n CC CD LPC sing 233 n n CC HC1 LPC sing 234 n n CC HC2 LPC sing 235 n n CD CE LPC sing 236 n n CD HD1 LPC sing 237 n n CD HD2 LPC sing 238 n n CE CF LPC sing 239 n n CE HE1 LPC sing 240 n n CE HE2 LPC sing 241 n n CF CG LPC sing 242 n n CF HF1 LPC sing 243 n n CF HF2 LPC sing 244 n n CG CH LPC sing 245 n n CG HG1 LPC sing 246 n n CG HG2 LPC sing 247 n n CH CI LPC sing 248 n n CH HH1 LPC sing 249 n n CH HH2 LPC sing 250 n n CI CJ LPC sing 251 n n CI HI1 LPC sing 252 n n CI HI2 LPC sing 253 n n CJ CK LPC sing 254 n n CJ HJ1 LPC sing 255 n n CJ HJ2 LPC sing 256 n n CK CL LPC sing 257 n n CK HK1 LPC sing 258 n n CK HK2 LPC sing 259 n n CL CM LPC sing 260 n n CL HL1 LPC sing 261 n n CL HL2 LPC sing 262 n n CM CN LPC sing 263 n n CM HM1 LPC sing 264 n n CM HM2 LPC sing 265 n n CN HN1 LPC sing 266 n n CN HN2 LPC sing 267 n n CN HN3 LPC sing 268 n n # _atom_sites.entry_id 8GRN _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 LPC A 1 801 801 LPC LPC . D 2 LPC B 1 801 801 LPC LPC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C0A LPC . . . C 2 165.56 178.923 133.874 1 93.7 ? C0A LPC 801 A 1 HETATM 2 C C0B LPC . . . C 2 168.08 179.28 133.671 1 97.59 ? C0B LPC 801 A 1 HETATM 3 C C0C LPC . . . C 2 166.453 181.096 132.913 1 100.14 ? C0C LPC 801 A 1 HETATM 4 N N1 LPC . . . C 2 166.699 179.71 133.357 1 98.85 ? N1 LPC 801 A 1 HETATM 5 C C2 LPC . . . C 2 166.736 180.289 134.703 1 97.4 ? C2 LPC 801 A 1 HETATM 6 C C3 LPC . . . C 2 167.357 179.295 135.678 1 95.76 ? C3 LPC 801 A 1 HETATM 7 O O4 LPC . . . C 2 167.47 179.89 136.972 1 103.3 ? O4 LPC 801 A 1 HETATM 8 P P5 LPC . . . C 2 166.264 179.783 138.023 1 121.03 ? P5 LPC 801 A 1 HETATM 9 O O5A LPC . . . C 2 165.716 178.386 137.92 1 106.69 -1 O5A LPC 801 A 1 HETATM 10 O O5B LPC . . . C 2 165.391 180.995 137.835 1 103.55 ? O5B LPC 801 A 1 HETATM 11 O O6 LPC . . . C 2 166.963 179.918 139.46 1 103.66 ? O6 LPC 801 A 1 HETATM 12 C C7 LPC . . . C 2 166.631 178.994 140.491 1 95.96 ? C7 LPC 801 A 1 HETATM 13 C C8 LPC . . . C 2 167.348 179.392 141.771 1 98.41 ? C8 LPC 801 A 1 HETATM 14 O O8 LPC . . . C 2 168.758 179.355 141.569 1 99.79 ? O8 LPC 801 A 1 HETATM 15 C C9 LPC . . . C 2 167.015 178.418 142.886 1 100.35 ? C9 LPC 801 A 1 HETATM 16 O OQ1 LPC . . . C 2 169.071 179.334 144.556 1 98.98 ? OQ1 LPC 801 A 1 HETATM 17 O OQ2 LPC . . . C 2 166.838 179.166 144.082 1 98.69 ? OQ2 LPC 801 A 1 HETATM 18 C CA LPC . . . C 2 167.943 179.329 145.001 1 100.16 ? CA LPC 801 A 1 HETATM 19 C CB LPC . . . C 2 167.752 178.992 146.442 1 97.48 ? CB LPC 801 A 1 HETATM 20 C CC LPC . . . C 2 166.502 179.629 147.017 1 94.76 ? CC LPC 801 A 1 HETATM 21 C CD LPC . . . C 2 166.599 179.484 148.528 1 93.38 ? CD LPC 801 A 1 HETATM 22 C CE LPC . . . C 2 168.013 179.039 148.876 1 98.02 ? CE LPC 801 A 1 HETATM 23 C CF LPC . . . C 2 168.232 179.082 150.374 1 97.14 ? CF LPC 801 A 1 HETATM 24 C CG LPC . . . C 2 166.909 178.855 151.08 1 97.22 ? CG LPC 801 A 1 HETATM 25 C CH LPC . . . C 2 167.129 177.971 152.293 1 95.65 ? CH LPC 801 A 1 HETATM 26 C CI LPC . . . C 2 168.123 178.608 153.247 1 91.39 ? CI LPC 801 A 1 HETATM 27 C CJ LPC . . . C 2 167.385 179.213 154.433 1 94.53 ? CJ LPC 801 A 1 HETATM 28 C CK LPC . . . C 2 167.269 178.222 155.584 1 94.92 ? CK LPC 801 A 1 HETATM 29 C CL LPC . . . C 2 165.844 178.167 156.118 1 95.7 ? CL LPC 801 A 1 HETATM 30 C CM LPC . . . C 2 164.921 179.083 155.324 1 95.62 ? CM LPC 801 A 1 HETATM 31 C CN LPC . . . C 2 163.579 179.214 156.003 1 100.3 ? CN LPC 801 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 378 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 31 #