data_8GTU # _model_server_result.job_id ja7rGzQveXpTpMmGIe5Ilg _model_server_result.datetime_utc '2025-01-08 20:19:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8gtu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 8GTU # _exptl.entry_id 8GTU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 352.447 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(3~{S})-1-methyl-1-azoniabicyclo[2.2.2]octan-3-yl] 2-oxidanyl-2,2-diphenyl-ethanoate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8GTU _cell.length_a 45.6 _cell.length_b 87.44 _cell.length_c 123.31 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8GTU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 212 A CYS 212 1_555 A SG CYS 239 A CYS 239 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.07 ? disulf ? disulf2 A SG CYS 212 A CYS 212 1_555 A SG CYS 239 A CYS 239 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.928 ? disulf ? disulf3 B SG CYS 212 B CYS 212 1_555 B SG CYS 239 B CYS 239 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.055 ? disulf ? disulf4 B SG CYS 212 B CYS 212 1_555 B SG CYS 239 B CYS 239 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.242 ? # _chem_comp.formula 'C22 H26 N O3 1' _chem_comp.formula_weight 352.447 _chem_comp.id KG2 _chem_comp.mon_nstd_flag . _chem_comp.name '[(3~{S})-1-methyl-1-azoniabicyclo[2.2.2]octan-3-yl] 2-oxidanyl-2,2-diphenyl-ethanoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N1 KG2 sing 173 n n C2 N1 KG2 sing 174 n n C2 C3 KG2 sing 175 n n N1 C6 KG2 sing 176 n n N1 C22 KG2 sing 177 n n C3 C4 KG2 sing 178 n n C6 C5 KG2 sing 179 n n O3 C9 KG2 sing 180 n n C22 C7 KG2 sing 181 n n C21 C20 KG2 doub 182 n y C21 C16 KG2 sing 183 n y C5 C4 KG2 sing 184 n n C20 C19 KG2 sing 185 n y C4 C7 KG2 sing 186 n n O1 C7 KG2 sing 187 n n O1 C8 KG2 sing 188 n n C9 C10 KG2 sing 189 n n C9 C16 KG2 sing 190 n n C9 C8 KG2 sing 191 n n C10 C15 KG2 doub 192 n y C10 C11 KG2 sing 193 n y C16 C17 KG2 doub 194 n y C15 C14 KG2 sing 195 n y C11 C12 KG2 doub 196 n y C14 C13 KG2 doub 197 n y C12 C13 KG2 sing 198 n y C19 C18 KG2 doub 199 n y C8 O2 KG2 doub 200 n n C17 C18 KG2 sing 201 n y C4 H1 KG2 sing 202 n n C14 H2 KG2 sing 203 n n C5 H3 KG2 sing 204 n n C5 H4 KG2 sing 205 n n C6 H5 KG2 sing 206 n n C6 H6 KG2 sing 207 n n C11 H7 KG2 sing 208 n n C7 H8 KG2 sing 209 n n C12 H9 KG2 sing 210 n n C13 H10 KG2 sing 211 n n C3 H11 KG2 sing 212 n n C3 H12 KG2 sing 213 n n C1 H13 KG2 sing 214 n n C1 H14 KG2 sing 215 n n C1 H15 KG2 sing 216 n n C2 H16 KG2 sing 217 n n C2 H17 KG2 sing 218 n n O3 H18 KG2 sing 219 n n C15 H19 KG2 sing 220 n n C17 H20 KG2 sing 221 n n C18 H21 KG2 sing 222 n n C19 H22 KG2 sing 223 n n C20 H23 KG2 sing 224 n n C21 H24 KG2 sing 225 n n C22 H25 KG2 sing 226 n n C22 H26 KG2 sing 227 n n # _atom_sites.entry_id 8GTU _atom_sites.fract_transf_matrix[1][1] 0.02193 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011436 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00811 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 KG2 A 1 301 301 KG2 DRG . D 2 KG2 B 1 301 301 KG2 DRG . E 3 HOH A 1 401 95 HOH HOH . E 3 HOH A 2 402 85 HOH HOH . E 3 HOH A 3 403 21 HOH HOH . E 3 HOH A 4 404 71 HOH HOH . E 3 HOH A 5 405 68 HOH HOH . E 3 HOH A 6 406 37 HOH HOH . E 3 HOH A 7 407 88 HOH HOH . E 3 HOH A 8 408 90 HOH HOH . E 3 HOH A 9 409 11 HOH HOH . E 3 HOH A 10 410 51 HOH HOH . E 3 HOH A 11 411 9 HOH HOH . E 3 HOH A 12 412 20 HOH HOH . E 3 HOH A 13 413 52 HOH HOH . E 3 HOH A 14 414 64 HOH HOH . E 3 HOH A 15 415 66 HOH HOH . E 3 HOH A 16 416 14 HOH HOH . E 3 HOH A 17 417 10 HOH HOH . E 3 HOH A 18 418 18 HOH HOH . E 3 HOH A 19 419 69 HOH HOH . E 3 HOH A 20 420 2 HOH HOH . E 3 HOH A 21 421 57 HOH HOH . E 3 HOH A 22 422 24 HOH HOH . E 3 HOH A 23 423 23 HOH HOH . E 3 HOH A 24 424 81 HOH HOH . E 3 HOH A 25 425 96 HOH HOH . E 3 HOH A 26 426 6 HOH HOH . E 3 HOH A 27 427 33 HOH HOH . E 3 HOH A 28 428 93 HOH HOH . E 3 HOH A 29 429 59 HOH HOH . E 3 HOH A 30 430 31 HOH HOH . E 3 HOH A 31 431 15 HOH HOH . E 3 HOH A 32 432 63 HOH HOH . E 3 HOH A 33 433 30 HOH HOH . E 3 HOH A 34 434 7 HOH HOH . E 3 HOH A 35 435 87 HOH HOH . E 3 HOH A 36 436 5 HOH HOH . E 3 HOH A 37 437 8 HOH HOH . E 3 HOH A 38 438 47 HOH HOH . E 3 HOH A 39 439 72 HOH HOH . E 3 HOH A 40 440 77 HOH HOH . E 3 HOH A 41 441 49 HOH HOH . E 3 HOH A 42 442 55 HOH HOH . E 3 HOH A 43 443 97 HOH HOH . E 3 HOH A 44 444 39 HOH HOH . E 3 HOH A 45 445 58 HOH HOH . E 3 HOH A 46 446 73 HOH HOH . E 3 HOH A 47 447 36 HOH HOH . E 3 HOH A 48 448 54 HOH HOH . E 3 HOH A 49 449 12 HOH HOH . E 3 HOH A 50 450 67 HOH HOH . E 3 HOH A 51 451 48 HOH HOH . E 3 HOH A 52 452 98 HOH HOH . E 3 HOH A 53 453 53 HOH HOH . E 3 HOH A 54 454 56 HOH HOH . E 3 HOH A 55 455 70 HOH HOH . E 3 HOH A 56 456 13 HOH HOH . E 3 HOH A 57 457 78 HOH HOH . E 3 HOH A 58 458 41 HOH HOH . E 3 HOH A 59 459 22 HOH HOH . F 3 HOH B 1 401 91 HOH HOH . F 3 HOH B 2 402 82 HOH HOH . F 3 HOH B 3 403 76 HOH HOH . F 3 HOH B 4 404 3 HOH HOH . F 3 HOH B 5 405 84 HOH HOH . F 3 HOH B 6 406 62 HOH HOH . F 3 HOH B 7 407 80 HOH HOH . F 3 HOH B 8 408 86 HOH HOH . F 3 HOH B 9 409 35 HOH HOH . F 3 HOH B 10 410 79 HOH HOH . F 3 HOH B 11 411 44 HOH HOH . F 3 HOH B 12 412 16 HOH HOH . F 3 HOH B 13 413 75 HOH HOH . F 3 HOH B 14 414 32 HOH HOH . F 3 HOH B 15 415 83 HOH HOH . F 3 HOH B 16 416 89 HOH HOH . F 3 HOH B 17 417 46 HOH HOH . F 3 HOH B 18 418 61 HOH HOH . F 3 HOH B 19 419 17 HOH HOH . F 3 HOH B 20 420 94 HOH HOH . F 3 HOH B 21 421 45 HOH HOH . F 3 HOH B 22 422 28 HOH HOH . F 3 HOH B 23 423 40 HOH HOH . F 3 HOH B 24 424 92 HOH HOH . F 3 HOH B 25 425 38 HOH HOH . F 3 HOH B 26 426 25 HOH HOH . F 3 HOH B 27 427 26 HOH HOH . F 3 HOH B 28 428 42 HOH HOH . F 3 HOH B 29 429 1 HOH HOH . F 3 HOH B 30 430 27 HOH HOH . F 3 HOH B 31 431 19 HOH HOH . F 3 HOH B 32 432 43 HOH HOH . F 3 HOH B 33 433 34 HOH HOH . F 3 HOH B 34 434 29 HOH HOH . F 3 HOH B 35 435 50 HOH HOH . F 3 HOH B 36 436 65 HOH HOH . F 3 HOH B 37 437 60 HOH HOH . F 3 HOH B 38 438 74 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 KG2 . . . C 2 22.819 -21.293 -11.195 1 82.47 ? C4 KG2 301 A 1 HETATM 2 C C14 KG2 . . . C 2 15.357 -21.884 -10.217 1 59.6 ? C14 KG2 301 A 1 HETATM 3 C C5 KG2 . . . C 2 24.351 -21.28 -11.237 1 71.41 ? C5 KG2 301 A 1 HETATM 4 C C6 KG2 . . . C 2 24.768 -20.421 -12.425 1 75.28 ? C6 KG2 301 A 1 HETATM 5 C C11 KG2 . . . C 2 17.112 -19.763 -10.399 1 60.09 ? C11 KG2 301 A 1 HETATM 6 C C7 KG2 . . . C 2 22.335 -19.916 -10.709 1 88.08 ? C7 KG2 301 A 1 HETATM 7 C C8 KG2 . . . C 2 19.964 -20.153 -10.082 1 85.02 ? C8 KG2 301 A 1 HETATM 8 C C9 KG2 . . . C 2 19.131 -21.27 -10.774 1 79.28 ? C9 KG2 301 A 1 HETATM 9 C C10 KG2 . . . C 2 17.625 -21.055 -10.499 1 68.78 ? C10 KG2 301 A 1 HETATM 10 C C12 KG2 . . . C 2 15.756 -19.539 -10.204 1 53.54 ? C12 KG2 301 A 1 HETATM 11 C C13 KG2 . . . C 2 14.882 -20.599 -10.118 1 55.17 ? C13 KG2 301 A 1 HETATM 12 N N1 KG2 . . . C 2 23.632 -19.494 -12.793 1 80.98 ? N1 KG2 301 A 1 HETATM 13 C C3 KG2 . . . C 2 22.316 -21.563 -12.62 1 80.89 ? C3 KG2 301 A 1 HETATM 14 C C1 KG2 . . . C 2 24.102 -18.406 -13.723 1 80.72 ? C1 KG2 301 A 1 HETATM 15 C C2 KG2 . . . C 2 22.554 -20.313 -13.458 1 74.71 ? C2 KG2 301 A 1 HETATM 16 O O1 KG2 . . . C 2 20.907 -19.667 -10.907 1 90.53 ? O1 KG2 301 A 1 HETATM 17 O O2 KG2 . . . C 2 19.802 -19.783 -8.951 1 91.37 ? O2 KG2 301 A 1 HETATM 18 O O3 KG2 . . . C 2 19.291 -21.121 -12.187 1 79.03 ? O3 KG2 301 A 1 HETATM 19 C C15 KG2 . . . C 2 16.716 -22.107 -10.415 1 65.75 ? C15 KG2 301 A 1 HETATM 20 C C16 KG2 . . . C 2 19.77 -22.644 -10.492 1 77.49 ? C16 KG2 301 A 1 HETATM 21 C C17 KG2 . . . C 2 20.581 -22.866 -9.384 1 74.61 ? C17 KG2 301 A 1 HETATM 22 C C18 KG2 . . . C 2 21.194 -24.093 -9.173 1 75.93 ? C18 KG2 301 A 1 HETATM 23 C C19 KG2 . . . C 2 21.03 -25.112 -10.088 1 77.99 ? C19 KG2 301 A 1 HETATM 24 C C20 KG2 . . . C 2 20.262 -24.904 -11.211 1 74.91 ? C20 KG2 301 A 1 HETATM 25 C C21 KG2 . . . C 2 19.649 -23.677 -11.418 1 76.43 ? C21 KG2 301 A 1 HETATM 26 C C22 KG2 . . . C 2 23.081 -18.865 -11.528 1 87.38 ? C22 KG2 301 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 26 #