data_8GVV # _model_server_result.job_id GGF0YYvDZCcKjBOsrJ5m8w _model_server_result.datetime_utc '2024-11-25 21:20:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8gvv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1204}' # _entry.id 8GVV # _exptl.entry_id 8GVV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.9 _cell.angle_gamma 90 _cell.entry_id 8GVV _cell.length_a 80.382 _cell.length_b 56.433 _cell.length_c 72.099 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8GVV _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8GVV _atom_sites.fract_transf_matrix[1][1] 0.012441 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005001 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01772 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014949 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 1201 1 PO4 PO4 . C 3 IOD A 1 1202 2 IOD IOD . D 3 IOD A 1 1203 3 IOD IOD . E 3 IOD A 1 1204 4 IOD IOD . F 4 HOH A 1 1301 37 HOH HOH . F 4 HOH A 2 1302 178 HOH HOH . F 4 HOH A 3 1303 153 HOH HOH . F 4 HOH A 4 1304 122 HOH HOH . F 4 HOH A 5 1305 144 HOH HOH . F 4 HOH A 6 1306 233 HOH HOH . F 4 HOH A 7 1307 218 HOH HOH . F 4 HOH A 8 1308 217 HOH HOH . F 4 HOH A 9 1309 115 HOH HOH . F 4 HOH A 10 1310 108 HOH HOH . F 4 HOH A 11 1311 44 HOH HOH . F 4 HOH A 12 1312 169 HOH HOH . F 4 HOH A 13 1313 3 HOH HOH . F 4 HOH A 14 1314 138 HOH HOH . F 4 HOH A 15 1315 123 HOH HOH . F 4 HOH A 16 1316 137 HOH HOH . F 4 HOH A 17 1317 250 HOH HOH . F 4 HOH A 18 1318 32 HOH HOH . F 4 HOH A 19 1319 59 HOH HOH . F 4 HOH A 20 1320 205 HOH HOH . F 4 HOH A 21 1321 243 HOH HOH . F 4 HOH A 22 1322 7 HOH HOH . F 4 HOH A 23 1323 154 HOH HOH . F 4 HOH A 24 1324 69 HOH HOH . F 4 HOH A 25 1325 106 HOH HOH . F 4 HOH A 26 1326 99 HOH HOH . F 4 HOH A 27 1327 12 HOH HOH . F 4 HOH A 28 1328 189 HOH HOH . F 4 HOH A 29 1329 157 HOH HOH . F 4 HOH A 30 1330 92 HOH HOH . F 4 HOH A 31 1331 31 HOH HOH . F 4 HOH A 32 1332 165 HOH HOH . F 4 HOH A 33 1333 55 HOH HOH . F 4 HOH A 34 1334 104 HOH HOH . F 4 HOH A 35 1335 145 HOH HOH . F 4 HOH A 36 1336 132 HOH HOH . F 4 HOH A 37 1337 220 HOH HOH . F 4 HOH A 38 1338 40 HOH HOH . F 4 HOH A 39 1339 190 HOH HOH . F 4 HOH A 40 1340 125 HOH HOH . F 4 HOH A 41 1341 16 HOH HOH . F 4 HOH A 42 1342 87 HOH HOH . F 4 HOH A 43 1343 58 HOH HOH . F 4 HOH A 44 1344 1 HOH HOH . F 4 HOH A 45 1345 22 HOH HOH . F 4 HOH A 46 1346 129 HOH HOH . F 4 HOH A 47 1347 53 HOH HOH . F 4 HOH A 48 1348 110 HOH HOH . F 4 HOH A 49 1349 51 HOH HOH . F 4 HOH A 50 1350 180 HOH HOH . F 4 HOH A 51 1351 27 HOH HOH . F 4 HOH A 52 1352 2 HOH HOH . F 4 HOH A 53 1353 5 HOH HOH . F 4 HOH A 54 1354 204 HOH HOH . F 4 HOH A 55 1355 158 HOH HOH . F 4 HOH A 56 1356 6 HOH HOH . F 4 HOH A 57 1357 73 HOH HOH . F 4 HOH A 58 1358 11 HOH HOH . F 4 HOH A 59 1359 135 HOH HOH . F 4 HOH A 60 1360 194 HOH HOH . F 4 HOH A 61 1361 150 HOH HOH . F 4 HOH A 62 1362 48 HOH HOH . F 4 HOH A 63 1363 56 HOH HOH . F 4 HOH A 64 1364 102 HOH HOH . F 4 HOH A 65 1365 13 HOH HOH . F 4 HOH A 66 1366 38 HOH HOH . F 4 HOH A 67 1367 84 HOH HOH . F 4 HOH A 68 1368 85 HOH HOH . F 4 HOH A 69 1369 201 HOH HOH . F 4 HOH A 70 1370 118 HOH HOH . F 4 HOH A 71 1371 98 HOH HOH . F 4 HOH A 72 1372 111 HOH HOH . F 4 HOH A 73 1373 10 HOH HOH . F 4 HOH A 74 1374 134 HOH HOH . F 4 HOH A 75 1375 78 HOH HOH . F 4 HOH A 76 1376 61 HOH HOH . F 4 HOH A 77 1377 65 HOH HOH . F 4 HOH A 78 1378 133 HOH HOH . F 4 HOH A 79 1379 107 HOH HOH . F 4 HOH A 80 1380 8 HOH HOH . F 4 HOH A 81 1381 72 HOH HOH . F 4 HOH A 82 1382 113 HOH HOH . F 4 HOH A 83 1383 17 HOH HOH . F 4 HOH A 84 1384 43 HOH HOH . F 4 HOH A 85 1385 211 HOH HOH . F 4 HOH A 86 1386 105 HOH HOH . F 4 HOH A 87 1387 75 HOH HOH . F 4 HOH A 88 1388 46 HOH HOH . F 4 HOH A 89 1389 19 HOH HOH . F 4 HOH A 90 1390 224 HOH HOH . F 4 HOH A 91 1391 242 HOH HOH . F 4 HOH A 92 1392 130 HOH HOH . F 4 HOH A 93 1393 203 HOH HOH . F 4 HOH A 94 1394 24 HOH HOH . F 4 HOH A 95 1395 4 HOH HOH . F 4 HOH A 96 1396 196 HOH HOH . F 4 HOH A 97 1397 9 HOH HOH . F 4 HOH A 98 1398 26 HOH HOH . F 4 HOH A 99 1399 167 HOH HOH . F 4 HOH A 100 1400 116 HOH HOH . F 4 HOH A 101 1401 176 HOH HOH . F 4 HOH A 102 1402 128 HOH HOH . F 4 HOH A 103 1403 112 HOH HOH . F 4 HOH A 104 1404 241 HOH HOH . F 4 HOH A 105 1405 117 HOH HOH . F 4 HOH A 106 1406 152 HOH HOH . F 4 HOH A 107 1407 68 HOH HOH . F 4 HOH A 108 1408 131 HOH HOH . F 4 HOH A 109 1409 149 HOH HOH . F 4 HOH A 110 1410 164 HOH HOH . F 4 HOH A 111 1411 54 HOH HOH . F 4 HOH A 112 1412 23 HOH HOH . F 4 HOH A 113 1413 103 HOH HOH . F 4 HOH A 114 1414 249 HOH HOH . F 4 HOH A 115 1415 240 HOH HOH . F 4 HOH A 116 1416 52 HOH HOH . F 4 HOH A 117 1417 88 HOH HOH . F 4 HOH A 118 1418 39 HOH HOH . F 4 HOH A 119 1419 71 HOH HOH . F 4 HOH A 120 1420 15 HOH HOH . F 4 HOH A 121 1421 20 HOH HOH . F 4 HOH A 122 1422 91 HOH HOH . F 4 HOH A 123 1423 114 HOH HOH . F 4 HOH A 124 1424 50 HOH HOH . F 4 HOH A 125 1425 109 HOH HOH . F 4 HOH A 126 1426 140 HOH HOH . F 4 HOH A 127 1427 101 HOH HOH . F 4 HOH A 128 1428 76 HOH HOH . F 4 HOH A 129 1429 226 HOH HOH . F 4 HOH A 130 1430 36 HOH HOH . F 4 HOH A 131 1431 64 HOH HOH . F 4 HOH A 132 1432 161 HOH HOH . F 4 HOH A 133 1433 14 HOH HOH . F 4 HOH A 134 1434 126 HOH HOH . F 4 HOH A 135 1435 181 HOH HOH . F 4 HOH A 136 1436 219 HOH HOH . F 4 HOH A 137 1437 34 HOH HOH . F 4 HOH A 138 1438 89 HOH HOH . F 4 HOH A 139 1439 29 HOH HOH . F 4 HOH A 140 1440 239 HOH HOH . F 4 HOH A 141 1441 232 HOH HOH . F 4 HOH A 142 1442 166 HOH HOH . F 4 HOH A 143 1443 148 HOH HOH . F 4 HOH A 144 1444 119 HOH HOH . F 4 HOH A 145 1445 41 HOH HOH . F 4 HOH A 146 1446 70 HOH HOH . F 4 HOH A 147 1447 63 HOH HOH . F 4 HOH A 148 1448 35 HOH HOH . F 4 HOH A 149 1449 244 HOH HOH . F 4 HOH A 150 1450 191 HOH HOH . F 4 HOH A 151 1451 197 HOH HOH . F 4 HOH A 152 1452 28 HOH HOH . F 4 HOH A 153 1453 177 HOH HOH . F 4 HOH A 154 1454 57 HOH HOH . F 4 HOH A 155 1455 81 HOH HOH . F 4 HOH A 156 1456 155 HOH HOH . F 4 HOH A 157 1457 49 HOH HOH . F 4 HOH A 158 1458 66 HOH HOH . F 4 HOH A 159 1459 227 HOH HOH . F 4 HOH A 160 1460 136 HOH HOH . F 4 HOH A 161 1461 215 HOH HOH . F 4 HOH A 162 1462 228 HOH HOH . F 4 HOH A 163 1463 42 HOH HOH . F 4 HOH A 164 1464 175 HOH HOH . F 4 HOH A 165 1465 120 HOH HOH . F 4 HOH A 166 1466 246 HOH HOH . F 4 HOH A 167 1467 62 HOH HOH . F 4 HOH A 168 1468 185 HOH HOH . F 4 HOH A 169 1469 82 HOH HOH . F 4 HOH A 170 1470 143 HOH HOH . F 4 HOH A 171 1471 230 HOH HOH . F 4 HOH A 172 1472 139 HOH HOH . F 4 HOH A 173 1473 208 HOH HOH . F 4 HOH A 174 1474 229 HOH HOH . F 4 HOH A 175 1475 95 HOH HOH . F 4 HOH A 176 1476 221 HOH HOH . F 4 HOH A 177 1477 234 HOH HOH . F 4 HOH A 178 1478 86 HOH HOH . F 4 HOH A 179 1479 173 HOH HOH . F 4 HOH A 180 1480 141 HOH HOH . F 4 HOH A 181 1481 236 HOH HOH . F 4 HOH A 182 1482 195 HOH HOH . F 4 HOH A 183 1483 247 HOH HOH . F 4 HOH A 184 1484 45 HOH HOH . F 4 HOH A 185 1485 100 HOH HOH . F 4 HOH A 186 1486 25 HOH HOH . F 4 HOH A 187 1487 184 HOH HOH . F 4 HOH A 188 1488 209 HOH HOH . F 4 HOH A 189 1489 77 HOH HOH . F 4 HOH A 190 1490 96 HOH HOH . F 4 HOH A 191 1491 248 HOH HOH . F 4 HOH A 192 1492 83 HOH HOH . F 4 HOH A 193 1493 127 HOH HOH . F 4 HOH A 194 1494 94 HOH HOH . F 4 HOH A 195 1495 187 HOH HOH . F 4 HOH A 196 1496 47 HOH HOH . F 4 HOH A 197 1497 188 HOH HOH . F 4 HOH A 198 1498 193 HOH HOH . F 4 HOH A 199 1499 198 HOH HOH . F 4 HOH A 200 1500 199 HOH HOH . F 4 HOH A 201 1501 93 HOH HOH . F 4 HOH A 202 1502 182 HOH HOH . F 4 HOH A 203 1503 252 HOH HOH . F 4 HOH A 204 1504 168 HOH HOH . F 4 HOH A 205 1505 210 HOH HOH . F 4 HOH A 206 1506 142 HOH HOH . F 4 HOH A 207 1507 60 HOH HOH . F 4 HOH A 208 1508 213 HOH HOH . F 4 HOH A 209 1509 237 HOH HOH . F 4 HOH A 210 1510 238 HOH HOH . F 4 HOH A 211 1511 30 HOH HOH . F 4 HOH A 212 1512 231 HOH HOH . F 4 HOH A 213 1513 156 HOH HOH . F 4 HOH A 214 1514 192 HOH HOH . F 4 HOH A 215 1515 160 HOH HOH . F 4 HOH A 216 1516 222 HOH HOH . F 4 HOH A 217 1517 124 HOH HOH . F 4 HOH A 218 1518 121 HOH HOH . F 4 HOH A 219 1519 74 HOH HOH . F 4 HOH A 220 1520 183 HOH HOH . F 4 HOH A 221 1521 67 HOH HOH . F 4 HOH A 222 1522 172 HOH HOH . F 4 HOH A 223 1523 21 HOH HOH . F 4 HOH A 224 1524 202 HOH HOH . F 4 HOH A 225 1525 147 HOH HOH . F 4 HOH A 226 1526 214 HOH HOH . F 4 HOH A 227 1527 159 HOH HOH . F 4 HOH A 228 1528 80 HOH HOH . F 4 HOH A 229 1529 207 HOH HOH . F 4 HOH A 230 1530 171 HOH HOH . F 4 HOH A 231 1531 97 HOH HOH . F 4 HOH A 232 1532 33 HOH HOH . F 4 HOH A 233 1533 151 HOH HOH . F 4 HOH A 234 1534 90 HOH HOH . F 4 HOH A 235 1535 186 HOH HOH . F 4 HOH A 236 1536 170 HOH HOH . F 4 HOH A 237 1537 79 HOH HOH . F 4 HOH A 238 1538 223 HOH HOH . F 4 HOH A 239 1539 206 HOH HOH . F 4 HOH A 240 1540 245 HOH HOH . F 4 HOH A 241 1541 200 HOH HOH . F 4 HOH A 242 1542 225 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -10.334 _atom_site.Cartn_y 5.598 _atom_site.Cartn_z 3.009 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 50 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 1204 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #