data_8GW7
#
_model_server_result.job_id            MlfJu_N-uRzHTXKMZOCgyA 
_model_server_result.datetime_utc      '2024-12-22 06:19:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8gw7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":903}' 
#
_entry.id    8GW7 
#
_exptl.entry_id    8GW7 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              486.726 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLESTEROL HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8GW7 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8GW7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 I N N 
? 3 L N N 
#
_chem_comp.formula           'C31 H50 O4' 
_chem_comp.formula_weight    486.726 
_chem_comp.id                Y01 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLESTEROL HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CBA Y01 sing 374 n n 
CBA CAB Y01 sing 375 n n 
CBA CAN Y01 sing 376 n n 
CAN CAJ Y01 sing 377 n n 
CAJ CAO Y01 sing 378 n n 
CAO CBB Y01 sing 379 n n 
CBB CAC Y01 sing 380 n n 
CBB CBE Y01 sing 381 n n 
CBE CAP Y01 sing 382 n n 
CBE CBI Y01 sing 383 n n 
CAP CAQ Y01 sing 384 n n 
CAQ CBG Y01 sing 385 n n 
CBG CBI Y01 sing 386 n n 
CBG CBD Y01 sing 387 n n 
CBI CAE Y01 sing 388 n n 
CBI CAU Y01 sing 389 n n 
CAU CAS Y01 sing 390 n n 
CAS CBF Y01 sing 391 n n 
CBF CBD Y01 sing 392 n n 
CBF CBH Y01 sing 393 n n 
CBD CAK Y01 sing 394 n n 
CAK CAI Y01 sing 395 n n 
CAI CAZ Y01 doub 396 n n 
CAZ CAV Y01 sing 397 n n 
CAZ CBH Y01 sing 398 n n 
CAV CBC Y01 sing 399 n n 
CBH CAD Y01 sing 400 n n 
CBH CAT Y01 sing 401 n n 
CAT CAR Y01 sing 402 n n 
CAR CBC Y01 sing 403 n n 
CBC OAW Y01 sing 404 n n 
OAW CAY Y01 sing 405 n n 
CAY OAG Y01 doub 406 n n 
CAY CAM Y01 sing 407 n n 
CAM CAL Y01 sing 408 n n 
CAL CAX Y01 sing 409 n n 
CAX OAH Y01 sing 410 n n 
CAX OAF Y01 doub 411 n n 
CAA HAA1 Y01 sing 412 n n 
CAA HAA2 Y01 sing 413 n n 
CAA HAA3 Y01 sing 414 n n 
CBA HBA Y01 sing 415 n n 
CAB HAB1 Y01 sing 416 n n 
CAB HAB2 Y01 sing 417 n n 
CAB HAB3 Y01 sing 418 n n 
CAN HAN1 Y01 sing 419 n n 
CAN HAN2 Y01 sing 420 n n 
CAJ HAJ1 Y01 sing 421 n n 
CAJ HAJ2 Y01 sing 422 n n 
CAO HAO1 Y01 sing 423 n n 
CAO HAO2 Y01 sing 424 n n 
CBB HBB Y01 sing 425 n n 
CAC HAC1 Y01 sing 426 n n 
CAC HAC2 Y01 sing 427 n n 
CAC HAC3 Y01 sing 428 n n 
CBE HBE Y01 sing 429 n n 
CAP HAP1 Y01 sing 430 n n 
CAP HAP2 Y01 sing 431 n n 
CAQ HAQ1 Y01 sing 432 n n 
CAQ HAQ2 Y01 sing 433 n n 
CBG HBG Y01 sing 434 n n 
CBD HBD Y01 sing 435 n n 
CAE HAE1 Y01 sing 436 n n 
CAE HAE2 Y01 sing 437 n n 
CAE HAE3 Y01 sing 438 n n 
CAU HAU1 Y01 sing 439 n n 
CAU HAU2 Y01 sing 440 n n 
CAS HAS1 Y01 sing 441 n n 
CAS HAS2 Y01 sing 442 n n 
CBF HBF Y01 sing 443 n n 
CAK HAK1 Y01 sing 444 n n 
CAK HAK2 Y01 sing 445 n n 
CAI HAI Y01 sing 446 n n 
CAV HAV1 Y01 sing 447 n n 
CAV HAV2 Y01 sing 448 n n 
CBC HBC Y01 sing 449 n n 
CAD HAD1 Y01 sing 450 n n 
CAD HAD2 Y01 sing 451 n n 
CAD HAD3 Y01 sing 452 n n 
CAT HAT1 Y01 sing 453 n n 
CAT HAT2 Y01 sing 454 n n 
CAR HAR1 Y01 sing 455 n n 
CAR HAR2 Y01 sing 456 n n 
CAM HAM1 Y01 sing 457 n n 
CAM HAM2 Y01 sing 458 n n 
CAL HAL1 Y01 sing 459 n n 
CAL HAL2 Y01 sing 460 n n 
OAH HAH Y01 sing 461 n n 
#
_atom_sites.entry_id                     8GW7 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 CL A 1 901 836 CL CL . 
E 2 CL A 1 902 839 CL CL . 
F 3 Y01 A 1 903 840 Y01 Y01 . 
G 2 CL C 1 901 836 CL CL . 
H 2 CL C 1 902 839 CL CL . 
I 3 Y01 C 1 903 840 Y01 Y01 . 
J 2 CL B 1 901 836 CL CL . 
K 2 CL B 1 902 839 CL CL . 
L 3 Y01 B 1 903 840 Y01 Y01 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA Y01 . . . L 3 102.202 90.685 96.956 1 52.09 ? CAA Y01 903 B 1 
HETATM 2 C CBA Y01 . . . L 3 102.25 91.803 97.981 1 52.09 ? CBA Y01 903 B 1 
HETATM 3 C CAB Y01 . . . L 3 100.906 91.866 98.668 1 52.09 ? CAB Y01 903 B 1 
HETATM 4 C CAN Y01 . . . L 3 102.621 93.149 97.341 1 52.09 ? CAN Y01 903 B 1 
HETATM 5 C CAJ Y01 . . . L 3 103.189 94.17 98.313 1 52.09 ? CAJ Y01 903 B 1 
HETATM 6 C CAO Y01 . . . L 3 103.945 95.349 97.66 1 52.09 ? CAO Y01 903 B 1 
HETATM 7 C CBB Y01 . . . L 3 103.082 96.541 97.232 1 52.09 ? CBB Y01 903 B 1 
HETATM 8 C CAC Y01 . . . L 3 102.471 97.165 98.478 1 52.09 ? CAC Y01 903 B 1 
HETATM 9 C CBE Y01 . . . L 3 103.774 97.675 96.451 1 52.09 ? CBE Y01 903 B 1 
HETATM 10 C CAP Y01 . . . L 3 105.301 97.69 96.403 1 52.09 ? CAP Y01 903 B 1 
HETATM 11 C CAQ Y01 . . . L 3 105.661 98.684 95.282 1 52.09 ? CAQ Y01 903 B 1 
HETATM 12 C CBG Y01 . . . L 3 104.339 98.924 94.544 1 52.09 ? CBG Y01 903 B 1 
HETATM 13 C CBI Y01 . . . L 3 103.481 97.721 94.947 1 52.09 ? CBI Y01 903 B 1 
HETATM 14 C CAE Y01 . . . L 3 103.928 96.421 94.258 1 52.09 ? CAE Y01 903 B 1 
HETATM 15 C CAU Y01 . . . L 3 102.076 98.099 94.497 1 52.09 ? CAU Y01 903 B 1 
HETATM 16 C CAS Y01 . . . L 3 102 98.292 92.981 1 52.09 ? CAS Y01 903 B 1 
HETATM 17 C CBF Y01 . . . L 3 103.119 99.121 92.341 1 52.09 ? CBF Y01 903 B 1 
HETATM 18 C CBD Y01 . . . L 3 104.406 99.01 93.027 1 52.09 ? CBD Y01 903 B 1 
HETATM 19 C CAK Y01 . . . L 3 105.197 100.192 92.668 1 52.09 ? CAK Y01 903 B 1 
HETATM 20 C CAI Y01 . . . L 3 105.492 100.389 91.217 1 52.09 ? CAI Y01 903 B 1 
HETATM 21 C CAZ Y01 . . . L 3 104.567 99.785 90.385 1 52.09 ? CAZ Y01 903 B 1 
HETATM 22 C CAV Y01 . . . L 3 104.836 99.923 88.955 1 52.09 ? CAV Y01 903 B 1 
HETATM 23 C CBH Y01 . . . L 3 103.394 98.979 90.858 1 52.09 ? CBH Y01 903 B 1 
HETATM 24 C CAD Y01 . . . L 3 103.933 97.597 90.529 1 52.09 ? CAD Y01 903 B 1 
HETATM 25 C CAT Y01 . . . L 3 102.251 99.18 89.91 1 52.09 ? CAT Y01 903 B 1 
HETATM 26 C CAR Y01 . . . L 3 102.583 99.604 88.461 1 52.09 ? CAR Y01 903 B 1 
HETATM 27 C CBC Y01 . . . L 3 103.687 100.655 88.383 1 52.09 ? CBC Y01 903 B 1 
HETATM 28 O OAW Y01 . . . L 3 104.004 101.179 87.113 1 52.09 ? OAW Y01 903 B 1 
HETATM 29 C CAY Y01 . . . L 3 103.778 100.354 86.039 1 52.09 ? CAY Y01 903 B 1 
HETATM 30 O OAG Y01 . . . L 3 102.823 100.666 85.364 1 52.09 ? OAG Y01 903 B 1 
HETATM 31 C CAM Y01 . . . L 3 104.711 99.182 85.827 1 52.09 ? CAM Y01 903 B 1 
HETATM 32 C CAL Y01 . . . L 3 104.68 98.699 84.393 1 52.09 ? CAL Y01 903 B 1 
HETATM 33 C CAX Y01 . . . L 3 105.096 99.775 83.343 1 52.09 ? CAX Y01 903 B 1 
HETATM 34 O OAH Y01 . . . L 3 106.28 99.785 82.955 1 52.09 ? OAH Y01 903 B 1 
HETATM 35 O OAF Y01 . . . L 3 104.197 100.552 82.967 1 52.09 ? OAF Y01 903 B 1 
HETATM 36 H HAA1 Y01 . . . L 3 101.278 90.095 97.001 1 52.09 ? HAA1 Y01 903 B 1 
HETATM 37 H HAA2 Y01 . . . L 3 103.015 89.957 97.033 1 52.09 ? HAA2 Y01 903 B 1 
HETATM 38 H HAA3 Y01 . . . L 3 102.229 91.029 95.913 1 52.09 ? HAA3 Y01 903 B 1 
HETATM 39 H HBA Y01 . . . L 3 103.023 91.526 98.736 1 52.09 ? HBA Y01 903 B 1 
HETATM 40 H HAB1 Y01 . . . L 3 100.759 92.794 99.229 1 52.09 ? HAB1 Y01 903 B 1 
HETATM 41 H HAB2 Y01 . . . L 3 100.752 91.037 99.365 1 52.09 ? HAB2 Y01 903 B 1 
HETATM 42 H HAB3 Y01 . . . L 3 100.055 91.825 97.976 1 52.09 ? HAB3 Y01 903 B 1 
HETATM 43 H HAN1 Y01 . . . L 3 101.743 93.562 96.826 1 52.09 ? HAN1 Y01 903 B 1 
HETATM 44 H HAN2 Y01 . . . L 3 103.349 92.969 96.537 1 52.09 ? HAN2 Y01 903 B 1 
HETATM 45 H HAJ1 Y01 . . . L 3 102.373 94.511 98.967 1 52.09 ? HAJ1 Y01 903 B 1 
HETATM 46 H HAJ2 Y01 . . . L 3 103.853 93.657 99.032 1 52.09 ? HAJ2 Y01 903 B 1 
HETATM 47 H HAO1 Y01 . . . L 3 104.479 94.975 96.764 1 52.09 ? HAO1 Y01 903 B 1 
HETATM 48 H HAO2 Y01 . . . L 3 104.768 95.693 98.304 1 52.09 ? HAO2 Y01 903 B 1 
HETATM 49 H HBB Y01 . . . L 3 102.273 96.164 96.56 1 52.09 ? HBB Y01 903 B 1 
HETATM 50 H HAC1 Y01 . . . L 3 101.821 98.011 98.21 1 52.09 ? HAC1 Y01 903 B 1 
HETATM 51 H HAC2 Y01 . . . L 3 101.882 96.466 99.069 1 52.09 ? HAC2 Y01 903 B 1 
HETATM 52 H HAC3 Y01 . . . L 3 103.169 97.601 99.197 1 52.09 ? HAC3 Y01 903 B 1 
HETATM 53 H HBE Y01 . . . L 3 103.458 98.631 96.916 1 52.09 ? HBE Y01 903 B 1 
HETATM 54 H HAP1 Y01 . . . L 3 105.781 97.932 97.354 1 52.09 ? HAP1 Y01 903 B 1 
HETATM 55 H HAP2 Y01 . . . L 3 105.733 96.697 96.185 1 52.09 ? HAP2 Y01 903 B 1 
HETATM 56 H HAQ1 Y01 . . . L 3 106.462 98.303 94.63 1 52.09 ? HAQ1 Y01 903 B 1 
HETATM 57 H HAQ2 Y01 . . . L 3 106.127 99.619 95.646 1 52.09 ? HAQ2 Y01 903 B 1 
HETATM 58 H HBG Y01 . . . L 3 103.928 99.901 94.912 1 52.09 ? HBG Y01 903 B 1 
HETATM 59 H HBD Y01 . . . L 3 104.963 98.11 92.656 1 52.09 ? HBD Y01 903 B 1 
HETATM 60 H HAE1 Y01 . . . L 3 103.677 95.495 94.768 1 52.09 ? HAE1 Y01 903 B 1 
HETATM 61 H HAE2 Y01 . . . L 3 105.013 96.317 94.133 1 52.09 ? HAE2 Y01 903 B 1 
HETATM 62 H HAE3 Y01 . . . L 3 103.52 96.309 93.248 1 52.09 ? HAE3 Y01 903 B 1 
HETATM 63 H HAU1 Y01 . . . L 3 101.336 97.336 94.812 1 52.09 ? HAU1 Y01 903 B 1 
HETATM 64 H HAU2 Y01 . . . L 3 101.722 98.98 95.057 1 52.09 ? HAU2 Y01 903 B 1 
HETATM 65 H HAS1 Y01 . . . L 3 101.016 98.733 92.753 1 52.09 ? HAS1 Y01 903 B 1 
HETATM 66 H HAS2 Y01 . . . L 3 101.913 97.305 92.491 1 52.09 ? HAS2 Y01 903 B 1 
HETATM 67 H HBF Y01 . . . L 3 102.737 100.153 92.396 1 52.09 ? HBF Y01 903 B 1 
HETATM 68 H HAK1 Y01 . . . L 3 106.174 100.269 93.154 1 52.09 ? HAK1 Y01 903 B 1 
HETATM 69 H HAK2 Y01 . . . L 3 104.632 101.106 92.987 1 52.09 ? HAK2 Y01 903 B 1 
HETATM 70 H HAI Y01 . . . L 3 106.358 100.965 90.973 1 52.09 ? HAI Y01 903 B 1 
HETATM 71 H HAV1 Y01 . . . L 3 105.846 100.299 88.777 1 52.09 ? HAV1 Y01 903 B 1 
HETATM 72 H HAV2 Y01 . . . L 3 105.031 98.91 88.527 1 52.09 ? HAV2 Y01 903 B 1 
HETATM 73 H HBC Y01 . . . L 3 103.593 101.518 89.022 1 52.09 ? HBC Y01 903 B 1 
HETATM 74 H HAD1 Y01 . . . L 3 103.683 97.315 89.504 1 52.09 ? HAD1 Y01 903 B 1 
HETATM 75 H HAD2 Y01 . . . L 3 105.01 97.52 90.601 1 52.09 ? HAD2 Y01 903 B 1 
HETATM 76 H HAD3 Y01 . . . L 3 103.515 96.795 91.135 1 52.09 ? HAD3 Y01 903 B 1 
HETATM 77 H HAT1 Y01 . . . L 3 101.688 98.246 89.857 1 52.09 ? HAT1 Y01 903 B 1 
HETATM 78 H HAT2 Y01 . . . L 3 101.556 99.887 90.358 1 52.09 ? HAT2 Y01 903 B 1 
HETATM 79 H HAR1 Y01 . . . L 3 102.867 98.703 87.892 1 52.09 ? HAR1 Y01 903 B 1 
HETATM 80 H HAR2 Y01 . . . L 3 101.696 99.981 87.938 1 52.09 ? HAR2 Y01 903 B 1 
HETATM 81 H HAM1 Y01 . . . L 3 104.393 98.361 86.497 1 52.09 ? HAM1 Y01 903 B 1 
HETATM 82 H HAM2 Y01 . . . L 3 105.745 99.393 86.148 1 52.09 ? HAM2 Y01 903 B 1 
HETATM 83 H HAL1 Y01 . . . L 3 105.317 97.81 84.243 1 52.09 ? HAL1 Y01 903 B 1 
HETATM 84 H HAL2 Y01 . . . L 3 103.675 98.35 84.149 1 52.09 ? HAL2 Y01 903 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           84 
#