data_8GXF
#
_model_server_result.job_id            Cq5Ay_Xk4jnndMvTa1SyHA 
_model_server_result.datetime_utc      '2024-11-28 01:19:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8gxf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":201}' 
#
_entry.id    8GXF 
#
_exptl.entry_id    8GXF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              767.534 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'COENZYME A' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          101.866 
_cell.angle_gamma         90 
_cell.entry_id            8GXF 
_cell.length_a            43.889 
_cell.length_b            99.013 
_cell.length_c            98.822 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8GXF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,I,J 1 1 
C,D,G,H,K,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C21 H36 N7 O16 P3 S' 
_chem_comp.formula_weight    767.534 
_chem_comp.id                COA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'COENZYME A' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1A C2A COA sing 70 n y 
N1A C6A COA doub 71 n y 
C2A N3A COA doub 72 n y 
C2A H2A COA sing 73 n n 
N3A C4A COA sing 74 n y 
C4A C5A COA doub 75 n y 
C4A N9A COA sing 76 n y 
C5A C6A COA sing 77 n y 
C5A N7A COA sing 78 n y 
C6A N6A COA sing 79 n n 
N6A H61A COA sing 80 n n 
N6A H62A COA sing 81 n n 
N7A C8A COA doub 82 n y 
C8A N9A COA sing 83 n y 
C8A H8A COA sing 84 n n 
N9A C1B COA sing 85 n n 
C1B C2B COA sing 86 n n 
C1B O4B COA sing 87 n n 
C1B H1B COA sing 88 n n 
C2B O2B COA sing 89 n n 
C2B C3B COA sing 90 n n 
C2B H2B COA sing 91 n n 
O2B HO2A COA sing 92 n n 
C3B O3B COA sing 93 n n 
C3B C4B COA sing 94 n n 
C3B H3B COA sing 95 n n 
O3B P3B COA sing 96 n n 
P3B O7A COA doub 97 n n 
P3B O8A COA sing 98 n n 
P3B O9A COA sing 99 n n 
O8A HOA8 COA sing 100 n n 
O9A HOA9 COA sing 101 n n 
C4B O4B COA sing 102 n n 
C4B C5B COA sing 103 n n 
C4B H4B COA sing 104 n n 
C5B O5B COA sing 105 n n 
C5B H51A COA sing 106 n n 
C5B H52A COA sing 107 n n 
O5B P1A COA sing 108 n n 
P1A O1A COA doub 109 n n 
P1A O2A COA sing 110 n n 
P1A O3A COA sing 111 n n 
O2A HOA2 COA sing 112 n n 
O3A P2A COA sing 113 n n 
P2A O4A COA doub 114 n n 
P2A O5A COA sing 115 n n 
P2A O6A COA sing 116 n n 
O5A HOA5 COA sing 117 n n 
O6A CCP COA sing 118 n n 
CBP CCP COA sing 119 n n 
CBP CDP COA sing 120 n n 
CBP CEP COA sing 121 n n 
CBP CAP COA sing 122 n n 
CCP H121 COA sing 123 n n 
CCP H122 COA sing 124 n n 
CDP H131 COA sing 125 n n 
CDP H132 COA sing 126 n n 
CDP H133 COA sing 127 n n 
CEP H141 COA sing 128 n n 
CEP H142 COA sing 129 n n 
CEP H143 COA sing 130 n n 
CAP OAP COA sing 131 n n 
CAP C9P COA sing 132 n n 
CAP H10 COA sing 133 n n 
OAP HO1 COA sing 134 n n 
C9P O9P COA doub 135 n n 
C9P N8P COA sing 136 n n 
N8P C7P COA sing 137 n n 
N8P HN8 COA sing 138 n n 
C7P C6P COA sing 139 n n 
C7P H71 COA sing 140 n n 
C7P H72 COA sing 141 n n 
C6P C5P COA sing 142 n n 
C6P H61 COA sing 143 n n 
C6P H62 COA sing 144 n n 
C5P O5P COA doub 145 n n 
C5P N4P COA sing 146 n n 
N4P C3P COA sing 147 n n 
N4P HN4 COA sing 148 n n 
C3P C2P COA sing 149 n n 
C3P H31 COA sing 150 n n 
C3P H32 COA sing 151 n n 
C2P S1P COA sing 152 n n 
C2P H21 COA sing 153 n n 
C2P H22 COA sing 154 n n 
S1P HS1 COA sing 155 n n 
#
_atom_sites.entry_id                     8GXF 
_atom_sites.fract_transf_matrix[1][1]    0.022785 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004787 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.0101 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01034 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 COA B 1 201 2 COA COA . 
F 2 COA A 1 201 1 COA COA . 
G 2 COA C 1 201 3 COA COA . 
H 2 COA D 1 201 4 COA COA . 
I 3 HOH B 1 301 7 HOH HOH . 
I 3 HOH B 2 302 19 HOH HOH . 
I 3 HOH B 3 303 36 HOH HOH . 
I 3 HOH B 4 304 3 HOH HOH . 
I 3 HOH B 5 305 37 HOH HOH . 
I 3 HOH B 6 306 9 HOH HOH . 
J 3 HOH A 1 301 24 HOH HOH . 
J 3 HOH A 2 302 22 HOH HOH . 
J 3 HOH A 3 303 39 HOH HOH . 
J 3 HOH A 4 304 32 HOH HOH . 
J 3 HOH A 5 305 38 HOH HOH . 
J 3 HOH A 6 306 20 HOH HOH . 
J 3 HOH A 7 307 21 HOH HOH . 
J 3 HOH A 8 308 40 HOH HOH . 
J 3 HOH A 9 309 41 HOH HOH . 
J 3 HOH A 10 310 28 HOH HOH . 
J 3 HOH A 11 311 42 HOH HOH . 
J 3 HOH A 12 312 10 HOH HOH . 
J 3 HOH A 13 313 12 HOH HOH . 
K 3 HOH C 1 301 8 HOH HOH . 
K 3 HOH C 2 302 30 HOH HOH . 
K 3 HOH C 3 303 33 HOH HOH . 
K 3 HOH C 4 304 2 HOH HOH . 
K 3 HOH C 5 305 6 HOH HOH . 
K 3 HOH C 6 306 5 HOH HOH . 
K 3 HOH C 7 307 15 HOH HOH . 
K 3 HOH C 8 308 1 HOH HOH . 
K 3 HOH C 9 309 4 HOH HOH . 
K 3 HOH C 10 310 11 HOH HOH . 
K 3 HOH C 11 311 23 HOH HOH . 
L 3 HOH D 1 301 26 HOH HOH . 
L 3 HOH D 2 302 13 HOH HOH . 
L 3 HOH D 3 303 18 HOH HOH . 
L 3 HOH D 4 304 27 HOH HOH . 
L 3 HOH D 5 305 34 HOH HOH . 
L 3 HOH D 6 306 16 HOH HOH . 
L 3 HOH D 7 307 29 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1A COA . . . F 2 5.361 24.214 2.609 1 68.14 ? N1A COA 201 A 1 
HETATM 2 C C2A COA . . . F 2 4.682 24.216 1.451 1 48.93 ? C2A COA 201 A 1 
HETATM 3 N N3A COA . . . F 2 3.45 23.781 1.301 1 42.38 ? N3A COA 201 A 1 
HETATM 4 C C4A COA . . . F 2 2.816 23.304 2.319 1 48.14 ? C4A COA 201 A 1 
HETATM 5 C C5A COA . . . F 2 3.452 23.269 3.641 1 46.44 ? C5A COA 201 A 1 
HETATM 6 C C6A COA . . . F 2 4.806 23.761 3.743 1 52.33 ? C6A COA 201 A 1 
HETATM 7 N N6A COA . . . F 2 5.43 23.757 4.902 1 26.11 ? N6A COA 201 A 1 
HETATM 8 N N7A COA . . . F 2 2.613 22.782 4.529 1 42.6 ? N7A COA 201 A 1 
HETATM 9 C C8A COA . . . F 2 1.521 22.532 3.771 1 55.24 ? C8A COA 201 A 1 
HETATM 10 N N9A COA . . . F 2 1.624 22.809 2.448 1 55.64 ? N9A COA 201 A 1 
HETATM 11 C C1B COA . . . F 2 0.527 22.642 1.409 1 53.64 ? C1B COA 201 A 1 
HETATM 12 C C2B COA . . . F 2 0.754 23.262 0.048 1 53.43 ? C2B COA 201 A 1 
HETATM 13 O O2B COA . . . F 2 0.324 24.594 -0.03 1 50.07 ? O2B COA 201 A 1 
HETATM 14 C C3B COA . . . F 2 -0.121 22.471 -0.883 1 59.24 ? C3B COA 201 A 1 
HETATM 15 O O3B COA . . . F 2 -1.416 23.046 -1.142 1 59.64 ? O3B COA 201 A 1 
HETATM 16 P P3B COA . . . F 2 -2.693 22.929 -0.194 1 57.45 ? P3B COA 201 A 1 
HETATM 17 O O7A COA . . . F 2 -2.295 22.2 0.99 1 58.13 ? O7A COA 201 A 1 
HETATM 18 O O8A COA . . . F 2 -3.111 24.236 0.263 1 78.98 ? O8A COA 201 A 1 
HETATM 19 O O9A COA . . . F 2 -3.74 22.449 -1.061 1 46.11 ? O9A COA 201 A 1 
HETATM 20 C C4B COA . . . F 2 -0.168 21.111 -0.222 1 53.19 ? C4B COA 201 A 1 
HETATM 21 O O4B COA . . . F 2 0.2 21.293 1.132 1 45.35 ? O4B COA 201 A 1 
HETATM 22 C C5B COA . . . F 2 0.759 20.152 -0.93 1 48.39 ? C5B COA 201 A 1 
HETATM 23 O O5B COA . . . F 2 0.026 19.324 -1.79 1 47.19 ? O5B COA 201 A 1 
HETATM 24 P P1A COA . . . F 2 0.691 19.04 -3.159 1 50.71 ? P1A COA 201 A 1 
HETATM 25 O O1A COA . . . F 2 0.297 17.713 -3.579 1 49.37 ? O1A COA 201 A 1 
HETATM 26 O O2A COA . . . F 2 0.422 20.214 -3.978 1 40.31 ? O2A COA 201 A 1 
HETATM 27 O O3A COA . . . F 2 2.212 18.93 -2.915 1 61.06 ? O3A COA 201 A 1 
HETATM 28 P P2A COA . . . F 2 3.005 18.165 -3.993 1 58.26 ? P2A COA 201 A 1 
HETATM 29 O O4A COA . . . F 2 2.634 16.766 -3.925 1 55.16 ? O4A COA 201 A 1 
HETATM 30 O O5A COA . . . F 2 2.625 18.904 -5.149 1 41.93 ? O5A COA 201 A 1 
HETATM 31 O O6A COA . . . F 2 4.591 18.094 -3.787 1 54.74 ? O6A COA 201 A 1 
HETATM 32 C CBP COA . . . F 2 6.573 16.806 -2.884 1 45.34 ? CBP COA 201 A 1 
HETATM 33 C CCP COA . . . F 2 5.427 17.791 -2.649 1 45.06 ? CCP COA 201 A 1 
HETATM 34 C CDP COA . . . F 2 5.867 15.487 -3.062 1 41.78 ? CDP COA 201 A 1 
HETATM 35 C CEP COA . . . F 2 7.233 16.974 -4.177 1 30.43 ? CEP COA 201 A 1 
HETATM 36 C CAP COA . . . F 2 7.869 17.035 -2 1 68.18 ? CAP COA 201 A 1 
HETATM 37 O OAP COA . . . F 2 7.621 18.013 -0.982 1 57.12 ? OAP COA 201 A 1 
HETATM 38 C C9P COA . . . F 2 8.808 16.012 -1.282 1 72.61 ? C9P COA 201 A 1 
HETATM 39 O O9P COA . . . F 2 9.911 16.401 -0.945 1 55.26 ? O9P COA 201 A 1 
HETATM 40 N N8P COA . . . F 2 8.459 14.74 -1.03 1 68.11 ? N8P COA 201 A 1 
HETATM 41 C C7P COA . . . F 2 8.925 13.854 0.016 1 42.7 ? C7P COA 201 A 1 
HETATM 42 C C6P COA . . . F 2 8.481 12.44 -0.356 1 43.8 ? C6P COA 201 A 1 
HETATM 43 C C5P COA . . . F 2 8.273 11.465 0.753 1 39.72 ? C5P COA 201 A 1 
HETATM 44 O O5P COA . . . F 2 9.138 11.121 1.508 1 38.11 ? O5P COA 201 A 1 
HETATM 45 N N4P COA . . . F 2 7.101 10.959 0.806 1 36.85 ? N4P COA 201 A 1 
HETATM 46 C C3P COA . . . F 2 6.94 9.75 0.086 1 39.16 ? C3P COA 201 A 1 
HETATM 47 C C2P COA . . . F 2 5.54 9.22 0.251 1 35.86 ? C2P COA 201 A 1 
HETATM 48 S S1P COA . . . F 2 4.692 9.595 -1.267 1 55.8 ? S1P COA 201 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           48 
#