data_8GXN # _model_server_result.job_id 3P1VvctQI5stkhkjv6LTEQ _model_server_result.datetime_utc '2025-08-01 00:42:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8gxn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 8GXN # _exptl.entry_id 8GXN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8GXN _cell.length_a 74.688 _cell.length_b 74.688 _cell.length_c 81.523 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8GXN _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1 A,B,C,D 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_557 -x,-x+y,-z+7/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 190.220333 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 153 B ASP 153 1_555 C MG MG . B MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? metalc ? metalc2 A O ALA 154 B ALA 154 1_555 C MG MG . B MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.889 ? metalc ? metalc3 A OD1 ASN 180 B ASN 180 1_555 C MG MG . B MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.889 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8GXN _atom_sites.fract_transf_matrix[1][1] 0.013389 _atom_sites.fract_transf_matrix[1][2] 0.00773 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01546 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012266 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SAH B 1 301 1 SAH SAH . C 3 MG B 1 302 1 MG MG . D 4 HOH B 1 401 17 HOH HOH . D 4 HOH B 2 402 231 HOH HOH . D 4 HOH B 3 403 173 HOH HOH . D 4 HOH B 4 404 256 HOH HOH . D 4 HOH B 5 405 221 HOH HOH . D 4 HOH B 6 406 171 HOH HOH . D 4 HOH B 7 407 263 HOH HOH . D 4 HOH B 8 408 232 HOH HOH . D 4 HOH B 9 409 219 HOH HOH . D 4 HOH B 10 410 166 HOH HOH . D 4 HOH B 11 411 138 HOH HOH . D 4 HOH B 12 412 114 HOH HOH . D 4 HOH B 13 413 197 HOH HOH . D 4 HOH B 14 414 6 HOH HOH . D 4 HOH B 15 415 76 HOH HOH . D 4 HOH B 16 416 149 HOH HOH . D 4 HOH B 17 417 235 HOH HOH . D 4 HOH B 18 418 91 HOH HOH . D 4 HOH B 19 419 4 HOH HOH . D 4 HOH B 20 420 83 HOH HOH . D 4 HOH B 21 421 12 HOH HOH . D 4 HOH B 22 422 84 HOH HOH . D 4 HOH B 23 423 36 HOH HOH . D 4 HOH B 24 424 142 HOH HOH . D 4 HOH B 25 425 31 HOH HOH . D 4 HOH B 26 426 48 HOH HOH . D 4 HOH B 27 427 130 HOH HOH . D 4 HOH B 28 428 208 HOH HOH . D 4 HOH B 29 429 74 HOH HOH . D 4 HOH B 30 430 47 HOH HOH . D 4 HOH B 31 431 85 HOH HOH . D 4 HOH B 32 432 169 HOH HOH . D 4 HOH B 33 433 117 HOH HOH . D 4 HOH B 34 434 42 HOH HOH . D 4 HOH B 35 435 127 HOH HOH . D 4 HOH B 36 436 52 HOH HOH . D 4 HOH B 37 437 133 HOH HOH . D 4 HOH B 38 438 104 HOH HOH . D 4 HOH B 39 439 33 HOH HOH . D 4 HOH B 40 440 236 HOH HOH . D 4 HOH B 41 441 44 HOH HOH . D 4 HOH B 42 442 21 HOH HOH . D 4 HOH B 43 443 116 HOH HOH . D 4 HOH B 44 444 183 HOH HOH . D 4 HOH B 45 445 54 HOH HOH . D 4 HOH B 46 446 118 HOH HOH . D 4 HOH B 47 447 39 HOH HOH . D 4 HOH B 48 448 20 HOH HOH . D 4 HOH B 49 449 237 HOH HOH . D 4 HOH B 50 450 148 HOH HOH . D 4 HOH B 51 451 70 HOH HOH . D 4 HOH B 52 452 209 HOH HOH . D 4 HOH B 53 453 186 HOH HOH . D 4 HOH B 54 454 233 HOH HOH . D 4 HOH B 55 455 40 HOH HOH . D 4 HOH B 56 456 49 HOH HOH . D 4 HOH B 57 457 137 HOH HOH . D 4 HOH B 58 458 144 HOH HOH . D 4 HOH B 59 459 13 HOH HOH . D 4 HOH B 60 460 106 HOH HOH . D 4 HOH B 61 461 45 HOH HOH . D 4 HOH B 62 462 88 HOH HOH . D 4 HOH B 63 463 82 HOH HOH . D 4 HOH B 64 464 120 HOH HOH . D 4 HOH B 65 465 27 HOH HOH . D 4 HOH B 66 466 16 HOH HOH . D 4 HOH B 67 467 164 HOH HOH . D 4 HOH B 68 468 103 HOH HOH . D 4 HOH B 69 469 51 HOH HOH . D 4 HOH B 70 470 15 HOH HOH . D 4 HOH B 71 471 100 HOH HOH . D 4 HOH B 72 472 165 HOH HOH . D 4 HOH B 73 473 176 HOH HOH . D 4 HOH B 74 474 68 HOH HOH . D 4 HOH B 75 475 181 HOH HOH . D 4 HOH B 76 476 119 HOH HOH . D 4 HOH B 77 477 29 HOH HOH . D 4 HOH B 78 478 8 HOH HOH . D 4 HOH B 79 479 195 HOH HOH . D 4 HOH B 80 480 14 HOH HOH . D 4 HOH B 81 481 212 HOH HOH . D 4 HOH B 82 482 258 HOH HOH . D 4 HOH B 83 483 72 HOH HOH . D 4 HOH B 84 484 78 HOH HOH . D 4 HOH B 85 485 109 HOH HOH . D 4 HOH B 86 486 128 HOH HOH . D 4 HOH B 87 487 177 HOH HOH . D 4 HOH B 88 488 134 HOH HOH . D 4 HOH B 89 489 167 HOH HOH . D 4 HOH B 90 490 98 HOH HOH . D 4 HOH B 91 491 67 HOH HOH . D 4 HOH B 92 492 107 HOH HOH . D 4 HOH B 93 493 57 HOH HOH . D 4 HOH B 94 494 2 HOH HOH . D 4 HOH B 95 495 32 HOH HOH . D 4 HOH B 96 496 247 HOH HOH . D 4 HOH B 97 497 220 HOH HOH . D 4 HOH B 98 498 73 HOH HOH . D 4 HOH B 99 499 172 HOH HOH . D 4 HOH B 100 500 5 HOH HOH . D 4 HOH B 101 501 226 HOH HOH . D 4 HOH B 102 502 204 HOH HOH . D 4 HOH B 103 503 143 HOH HOH . D 4 HOH B 104 504 112 HOH HOH . D 4 HOH B 105 505 23 HOH HOH . D 4 HOH B 106 506 147 HOH HOH . D 4 HOH B 107 507 65 HOH HOH . D 4 HOH B 108 508 64 HOH HOH . D 4 HOH B 109 509 69 HOH HOH . D 4 HOH B 110 510 113 HOH HOH . D 4 HOH B 111 511 10 HOH HOH . D 4 HOH B 112 512 50 HOH HOH . D 4 HOH B 113 513 80 HOH HOH . D 4 HOH B 114 514 11 HOH HOH . D 4 HOH B 115 515 19 HOH HOH . D 4 HOH B 116 516 22 HOH HOH . D 4 HOH B 117 517 60 HOH HOH . D 4 HOH B 118 518 1 HOH HOH . D 4 HOH B 119 519 244 HOH HOH . D 4 HOH B 120 520 269 HOH HOH . D 4 HOH B 121 521 7 HOH HOH . D 4 HOH B 122 522 61 HOH HOH . D 4 HOH B 123 523 200 HOH HOH . D 4 HOH B 124 524 71 HOH HOH . D 4 HOH B 125 525 223 HOH HOH . D 4 HOH B 126 526 139 HOH HOH . D 4 HOH B 127 527 3 HOH HOH . D 4 HOH B 128 528 55 HOH HOH . D 4 HOH B 129 529 255 HOH HOH . D 4 HOH B 130 530 96 HOH HOH . D 4 HOH B 131 531 79 HOH HOH . D 4 HOH B 132 532 9 HOH HOH . D 4 HOH B 133 533 252 HOH HOH . D 4 HOH B 134 534 224 HOH HOH . D 4 HOH B 135 535 267 HOH HOH . D 4 HOH B 136 536 46 HOH HOH . D 4 HOH B 137 537 28 HOH HOH . D 4 HOH B 138 538 201 HOH HOH . D 4 HOH B 139 539 124 HOH HOH . D 4 HOH B 140 540 62 HOH HOH . D 4 HOH B 141 541 257 HOH HOH . D 4 HOH B 142 542 161 HOH HOH . D 4 HOH B 143 543 131 HOH HOH . D 4 HOH B 144 544 94 HOH HOH . D 4 HOH B 145 545 150 HOH HOH . D 4 HOH B 146 546 245 HOH HOH . D 4 HOH B 147 547 38 HOH HOH . D 4 HOH B 148 548 111 HOH HOH . D 4 HOH B 149 549 18 HOH HOH . D 4 HOH B 150 550 86 HOH HOH . D 4 HOH B 151 551 99 HOH HOH . D 4 HOH B 152 552 211 HOH HOH . D 4 HOH B 153 553 270 HOH HOH . D 4 HOH B 154 554 178 HOH HOH . D 4 HOH B 155 555 210 HOH HOH . D 4 HOH B 156 556 108 HOH HOH . D 4 HOH B 157 557 234 HOH HOH . D 4 HOH B 158 558 152 HOH HOH . D 4 HOH B 159 559 26 HOH HOH . D 4 HOH B 160 560 59 HOH HOH . D 4 HOH B 161 561 122 HOH HOH . D 4 HOH B 162 562 56 HOH HOH . D 4 HOH B 163 563 156 HOH HOH . D 4 HOH B 164 564 66 HOH HOH . D 4 HOH B 165 565 254 HOH HOH . D 4 HOH B 166 566 30 HOH HOH . D 4 HOH B 167 567 24 HOH HOH . D 4 HOH B 168 568 229 HOH HOH . D 4 HOH B 169 569 158 HOH HOH . D 4 HOH B 170 570 250 HOH HOH . D 4 HOH B 171 571 174 HOH HOH . D 4 HOH B 172 572 81 HOH HOH . D 4 HOH B 173 573 146 HOH HOH . D 4 HOH B 174 574 259 HOH HOH . D 4 HOH B 175 575 227 HOH HOH . D 4 HOH B 176 576 262 HOH HOH . D 4 HOH B 177 577 271 HOH HOH . D 4 HOH B 178 578 199 HOH HOH . D 4 HOH B 179 579 155 HOH HOH . D 4 HOH B 180 580 63 HOH HOH . D 4 HOH B 181 581 34 HOH HOH . D 4 HOH B 182 582 188 HOH HOH . D 4 HOH B 183 583 228 HOH HOH . D 4 HOH B 184 584 246 HOH HOH . D 4 HOH B 185 585 37 HOH HOH . D 4 HOH B 186 586 101 HOH HOH . D 4 HOH B 187 587 191 HOH HOH . D 4 HOH B 188 588 121 HOH HOH . D 4 HOH B 189 589 265 HOH HOH . D 4 HOH B 190 590 110 HOH HOH . D 4 HOH B 191 591 105 HOH HOH . D 4 HOH B 192 592 189 HOH HOH . D 4 HOH B 193 593 162 HOH HOH . D 4 HOH B 194 594 213 HOH HOH . D 4 HOH B 195 595 193 HOH HOH . D 4 HOH B 196 596 249 HOH HOH . D 4 HOH B 197 597 129 HOH HOH . D 4 HOH B 198 598 261 HOH HOH . D 4 HOH B 199 599 196 HOH HOH . D 4 HOH B 200 600 53 HOH HOH . D 4 HOH B 201 601 192 HOH HOH . D 4 HOH B 202 602 159 HOH HOH . D 4 HOH B 203 603 145 HOH HOH . D 4 HOH B 204 604 132 HOH HOH . D 4 HOH B 205 605 58 HOH HOH . D 4 HOH B 206 606 215 HOH HOH . D 4 HOH B 207 607 123 HOH HOH . D 4 HOH B 208 608 264 HOH HOH . D 4 HOH B 209 609 102 HOH HOH . D 4 HOH B 210 610 214 HOH HOH . D 4 HOH B 211 611 251 HOH HOH . D 4 HOH B 212 612 180 HOH HOH . D 4 HOH B 213 613 135 HOH HOH . D 4 HOH B 214 614 248 HOH HOH . D 4 HOH B 215 615 184 HOH HOH . D 4 HOH B 216 616 35 HOH HOH . D 4 HOH B 217 617 179 HOH HOH . D 4 HOH B 218 618 77 HOH HOH . D 4 HOH B 219 619 194 HOH HOH . D 4 HOH B 220 620 140 HOH HOH . D 4 HOH B 221 621 41 HOH HOH . D 4 HOH B 222 622 239 HOH HOH . D 4 HOH B 223 623 206 HOH HOH . D 4 HOH B 224 624 90 HOH HOH . D 4 HOH B 225 625 160 HOH HOH . D 4 HOH B 226 626 154 HOH HOH . D 4 HOH B 227 627 217 HOH HOH . D 4 HOH B 228 628 243 HOH HOH . D 4 HOH B 229 629 240 HOH HOH . D 4 HOH B 230 630 151 HOH HOH . D 4 HOH B 231 631 216 HOH HOH . D 4 HOH B 232 632 157 HOH HOH . D 4 HOH B 233 633 266 HOH HOH . D 4 HOH B 234 634 93 HOH HOH . D 4 HOH B 235 635 125 HOH HOH . D 4 HOH B 236 636 241 HOH HOH . D 4 HOH B 237 637 115 HOH HOH . D 4 HOH B 238 638 175 HOH HOH . D 4 HOH B 239 639 95 HOH HOH . D 4 HOH B 240 640 182 HOH HOH . D 4 HOH B 241 641 25 HOH HOH . D 4 HOH B 242 642 222 HOH HOH . D 4 HOH B 243 643 92 HOH HOH . D 4 HOH B 244 644 141 HOH HOH . D 4 HOH B 245 645 205 HOH HOH . D 4 HOH B 246 646 75 HOH HOH . D 4 HOH B 247 647 126 HOH HOH . D 4 HOH B 248 648 230 HOH HOH . D 4 HOH B 249 649 168 HOH HOH . D 4 HOH B 250 650 218 HOH HOH . D 4 HOH B 251 651 207 HOH HOH . D 4 HOH B 252 652 136 HOH HOH . D 4 HOH B 253 653 190 HOH HOH . D 4 HOH B 254 654 89 HOH HOH . D 4 HOH B 255 655 170 HOH HOH . D 4 HOH B 256 656 43 HOH HOH . D 4 HOH B 257 657 253 HOH HOH . D 4 HOH B 258 658 242 HOH HOH . D 4 HOH B 259 659 260 HOH HOH . D 4 HOH B 260 660 268 HOH HOH . D 4 HOH B 261 661 238 HOH HOH . D 4 HOH B 262 662 225 HOH HOH . D 4 HOH B 263 663 97 HOH HOH . D 4 HOH B 264 664 153 HOH HOH . D 4 HOH B 265 665 198 HOH HOH . D 4 HOH B 266 666 185 HOH HOH . D 4 HOH B 267 667 163 HOH HOH . D 4 HOH B 268 668 187 HOH HOH . D 4 HOH B 269 669 87 HOH HOH . D 4 HOH B 270 670 202 HOH HOH . D 4 HOH B 271 671 203 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 1.037 _atom_site.Cartn_y 25.077 _atom_site.Cartn_z 83.935 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 31.57 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 302 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 76 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #