data_8GY6
#
_model_server_result.job_id            DwjgCEMHAkwWt7rSse2TTA 
_model_server_result.datetime_utc      '2024-11-21 08:37:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8gy6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1001}' 
#
_entry.id    8GY6 
#
_exptl.entry_id    8GY6 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              518.554 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            Gossypol 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
#
_chem_comp.formula           'C30 H30 O8' 
_chem_comp.formula_weight    518.554 
_chem_comp.id                GO3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              Gossypol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C34 C19 GO3 sing 129 n n 
C19 C33 GO3 sing 130 n n 
C19 C15 GO3 sing 131 n n 
O3 C27 GO3 sing 132 n n 
C15 C27 GO3 doub 133 n y 
C15 C11 GO3 sing 134 n y 
C23 C11 GO3 doub 135 n y 
C23 C17 GO3 sing 136 n y 
C31 C17 GO3 sing 137 n n 
O8 C38 GO3 doub 138 n n 
C27 C29 GO3 sing 139 n y 
C11 C13 GO3 sing 140 n y 
C17 C9 GO3 doub 141 n y 
O2 C22 GO3 sing 142 n n 
C38 C26 GO3 sing 143 n n 
C29 O5 GO3 sing 144 n n 
C29 C25 GO3 doub 145 n y 
C13 C25 GO3 sing 146 n y 
C13 C21 GO3 doub 147 n y 
C9 C21 GO3 sing 148 n y 
C9 C10 GO3 sing 149 n n 
C25 C37 GO3 sing 150 n n 
C22 C10 GO3 doub 151 n y 
C22 C14 GO3 sing 152 n y 
C21 O1 GO3 sing 153 n n 
C10 C18 GO3 sing 154 n y 
C26 C14 GO3 sing 155 n y 
C26 C30 GO3 doub 156 n y 
C14 C12 GO3 doub 157 n y 
O6 C30 GO3 sing 158 n n 
C37 O7 GO3 doub 159 n n 
C30 C28 GO3 sing 160 n y 
C18 C32 GO3 sing 161 n n 
C18 C24 GO3 doub 162 n y 
C12 C24 GO3 sing 163 n y 
C12 C16 GO3 sing 164 n y 
C28 C16 GO3 doub 165 n y 
C28 O4 GO3 sing 166 n n 
C16 C20 GO3 sing 167 n n 
C20 C35 GO3 sing 168 n n 
C20 C36 GO3 sing 169 n n 
C19 H191 GO3 sing 170 n n 
C20 H201 GO3 sing 171 n n 
C23 H231 GO3 sing 172 n n 
C24 H241 GO3 sing 173 n n 
C31 H311 GO3 sing 174 n n 
C31 H312 GO3 sing 175 n n 
C31 H313 GO3 sing 176 n n 
C32 H323 GO3 sing 177 n n 
C32 H322 GO3 sing 178 n n 
C32 H321 GO3 sing 179 n n 
C33 H331 GO3 sing 180 n n 
C33 H332 GO3 sing 181 n n 
C33 H333 GO3 sing 182 n n 
C34 H341 GO3 sing 183 n n 
C34 H342 GO3 sing 184 n n 
C34 H343 GO3 sing 185 n n 
C35 H353 GO3 sing 186 n n 
C35 H352 GO3 sing 187 n n 
C35 H351 GO3 sing 188 n n 
C36 H362 GO3 sing 189 n n 
C36 H361 GO3 sing 190 n n 
C36 H363 GO3 sing 191 n n 
C37 H371 GO3 sing 192 n n 
C38 H381 GO3 sing 193 n n 
O1 H011 GO3 sing 194 n n 
O2 H021 GO3 sing 195 n n 
O3 H031 GO3 sing 196 n n 
O4 H041 GO3 sing 197 n n 
O5 H051 GO3 sing 198 n n 
O6 H061 GO3 sing 199 n n 
#
_atom_sites.entry_id                     8GY6 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 4 GO3 A 1 1001 1001 GO3 Z9 . 
F 4 GO3 A 1 1002 1002 GO3 Z9 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C9 GO3 . . . E 4 52.084 64.247 88.713 1 236.08 ? C9 GO3 1001 A 1 
HETATM 2 C C10 GO3 . . . E 4 52.91 65.258 89.604 1 236.08 ? C10 GO3 1001 A 1 
HETATM 3 C C11 GO3 . . . E 4 50.504 62.424 87.138 1 236.08 ? C11 GO3 1001 A 1 
HETATM 4 C C12 GO3 . . . E 4 54.565 67.117 90.88 1 236.08 ? C12 GO3 1001 A 1 
HETATM 5 C C13 GO3 . . . E 4 50.874 63.61 86.583 1 236.08 ? C13 GO3 1001 A 1 
HETATM 6 C C14 GO3 . . . E 4 53.717 66.365 91.648 1 236.08 ? C14 GO3 1001 A 1 
HETATM 7 C C15 GO3 . . . E 4 49.735 61.423 86.487 1 236.08 ? C15 GO3 1001 A 1 
HETATM 8 C C16 GO3 . . . E 4 55.436 68.085 91.463 1 236.08 ? C16 GO3 1001 A 1 
HETATM 9 C C17 GO3 . . . E 4 51.631 63.007 89.186 1 236.08 ? C17 GO3 1001 A 1 
HETATM 10 C C18 GO3 . . . E 4 53.751 66.179 88.878 1 236.08 ? C18 GO3 1001 A 1 
HETATM 11 C C19 GO3 . . . E 4 49.408 60.144 87.262 1 236.08 ? C19 GO3 1001 A 1 
HETATM 12 C C20 GO3 . . . E 4 56.257 68.961 90.501 1 236.08 ? C20 GO3 1001 A 1 
HETATM 13 C C21 GO3 . . . E 4 51.678 64.53 87.372 1 236.08 ? C21 GO3 1001 A 1 
HETATM 14 C C22 GO3 . . . E 4 52.866 65.413 90.988 1 236.08 ? C22 GO3 1001 A 1 
HETATM 15 C C23 GO3 . . . E 4 50.891 62.129 88.449 1 236.08 ? C23 GO3 1001 A 1 
HETATM 16 C C24 GO3 . . . E 4 54.552 67.07 89.5 1 236.08 ? C24 GO3 1001 A 1 
HETATM 17 C C25 GO3 . . . E 4 50.429 63.83 85.225 1 236.08 ? C25 GO3 1001 A 1 
HETATM 18 C C26 GO3 . . . E 4 53.814 66.514 93.091 1 236.08 ? C26 GO3 1001 A 1 
HETATM 19 C C27 GO3 . . . E 4 49.321 61.656 85.187 1 236.08 ? C27 GO3 1001 A 1 
HETATM 20 C C28 GO3 . . . E 4 55.44 68.281 92.843 1 236.08 ? C28 GO3 1001 A 1 
HETATM 21 C C29 GO3 . . . E 4 49.668 62.861 84.6 1 236.08 ? C29 GO3 1001 A 1 
HETATM 22 C C30 GO3 . . . E 4 54.663 67.458 93.642 1 236.08 ? C30 GO3 1001 A 1 
HETATM 23 C C31 GO3 . . . E 4 51.903 62.431 90.536 1 236.08 ? C31 GO3 1001 A 1 
HETATM 24 C C32 GO3 . . . E 4 54.005 66.389 87.373 1 236.08 ? C32 GO3 1001 A 1 
HETATM 25 C C33 GO3 . . . E 4 50.079 58.879 86.724 1 236.08 ? C33 GO3 1001 A 1 
HETATM 26 C C34 GO3 . . . E 4 47.929 59.953 87.6 1 236.08 ? C34 GO3 1001 A 1 
HETATM 27 C C35 GO3 . . . E 4 55.86 70.439 90.467 1 236.08 ? C35 GO3 1001 A 1 
HETATM 28 C C36 GO3 . . . E 4 57.77 68.732 90.554 1 236.08 ? C36 GO3 1001 A 1 
HETATM 29 C C37 GO3 . . . E 4 50.682 65.056 84.34 1 236.08 ? C37 GO3 1001 A 1 
HETATM 30 C C38 GO3 . . . E 4 53.029 65.738 94.155 1 236.08 ? C38 GO3 1001 A 1 
HETATM 31 O O1 GO3 . . . E 4 52.07 65.741 86.788 1 236.08 ? O1 GO3 1001 A 1 
HETATM 32 O O2 GO3 . . . E 4 52.051 64.515 91.692 1 236.08 ? O2 GO3 1001 A 1 
HETATM 33 O O3 GO3 . . . E 4 48.565 60.738 84.453 1 236.08 ? O3 GO3 1001 A 1 
HETATM 34 O O4 GO3 . . . E 4 56.289 69.19 93.493 1 236.08 ? O4 GO3 1001 A 1 
HETATM 35 O O5 GO3 . . . E 4 49.276 63.124 83.288 1 236.08 ? O5 GO3 1001 A 1 
HETATM 36 O O6 GO3 . . . E 4 54.715 67.604 95.031 1 236.08 ? O6 GO3 1001 A 1 
HETATM 37 O O7 GO3 . . . E 4 51.748 65.224 83.85 1 236.08 ? O7 GO3 1001 A 1 
HETATM 38 O O8 GO3 . . . E 4 52.027 66.053 94.704 1 236.08 ? O8 GO3 1001 A 1 
#
_model_server_stats.io_time_ms              71 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           328 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           38 
#