data_8H1G # _model_server_result.job_id mERiYaHL1WJ4Gc3eyofnYw _model_server_result.datetime_utc '2025-10-01 07:51:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8h1g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":504}' # _entry.id 8H1G # _exptl.entry_id 8H1G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8H1G _cell.length_a 35.582 _cell.length_b 35.582 _cell.length_c 167.825 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8H1G _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 167.825 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 30 A HIS 353 1_555 F CD CD . A CD 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc2 A OE1 GLU 34 A GLU 357 1_555 E CD CD . A CD 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc3 A OE2 GLU 34 A GLU 357 1_555 F CD CD . A CD 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc4 A OD1 ASP 43 A ASP 366 1_555 C NA NA . A NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.723 ? metalc ? metalc5 A OD2 ASP 43 A ASP 366 1_555 C NA NA . A NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc6 A SG CYS 48 A CYS 371 1_555 F CD CD . A CD 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? metalc ? metalc7 A SG CYS 48 A CYS 371 1_555 G CD CD . A CD 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? metalc ? metalc8 A OE1 GLU 61 A GLU 384 1_555 D CD CD . A CD 503 7_566 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc9 A OE2 GLU 61 A GLU 384 1_555 D CD CD . A CD 503 7_566 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc10 A SG CYS 79 A CYS 402 1_555 E CD CD . A CD 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? metalc ? metalc11 A ND1 HIS 81 A HIS 404 1_555 E CD CD . A CD 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc12 A O TYR 102 A TYR 425 1_555 D CD CD . A CD 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc13 A OXT TYR 102 A TYR 425 1_555 D CD CD . A CD 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc14 C NA NA . A NA 502 1_555 H O HOH . A HOH 658 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.779 ? metalc ? metalc15 D CD CD . A CD 503 1_555 H O HOH . A HOH 659 7_456 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? metalc ? metalc16 D CD CD . A CD 503 1_555 H O HOH . A HOH 660 7_456 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? metalc ? metalc17 E CD CD . A CD 504 1_555 H O HOH . A HOH 647 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc18 E CD CD . A CD 504 1_555 H O HOH . A HOH 661 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? metalc ? metalc19 F CD CD . A CD 505 1_555 H O HOH . A HOH 647 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc20 F CD CD . A CD 505 1_555 H O HOH . A HOH 655 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc21 G CD CD . A CD 506 1_555 H O HOH . A HOH 662 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc22 G CD CD . A CD 506 1_555 H O HOH . A HOH 666 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag ? _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8H1G _atom_sites.fract_transf_matrix[1][1] 0.028104 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.028104 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005959 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PEG A 1 501 1 PEG PEG ? C 3 NA A 1 502 2 NA NA ? D 4 CD A 1 503 1 CD CD ? E 4 CD A 1 504 2 CD CD ? F 4 CD A 1 505 3 CD CD ? G 4 CD A 1 506 4 CD CD ? H 5 HOH A 1 601 44 HOH HOH ? H 5 HOH A 2 602 38 HOH HOH ? H 5 HOH A 3 603 43 HOH HOH ? H 5 HOH A 4 604 47 HOH HOH ? H 5 HOH A 5 605 34 HOH HOH ? H 5 HOH A 6 606 62 HOH HOH ? H 5 HOH A 7 607 23 HOH HOH ? H 5 HOH A 8 608 39 HOH HOH ? H 5 HOH A 9 609 63 HOH HOH ? H 5 HOH A 10 610 64 HOH HOH ? H 5 HOH A 11 611 53 HOH HOH ? H 5 HOH A 12 612 69 HOH HOH ? H 5 HOH A 13 613 66 HOH HOH ? H 5 HOH A 14 614 1 HOH HOH ? H 5 HOH A 15 615 15 HOH HOH ? H 5 HOH A 16 616 45 HOH HOH ? H 5 HOH A 17 617 28 HOH HOH ? H 5 HOH A 18 618 10 HOH HOH ? H 5 HOH A 19 619 5 HOH HOH ? H 5 HOH A 20 620 31 HOH HOH ? H 5 HOH A 21 621 30 HOH HOH ? H 5 HOH A 22 622 2 HOH HOH ? H 5 HOH A 23 623 3 HOH HOH ? H 5 HOH A 24 624 67 HOH HOH ? H 5 HOH A 25 625 27 HOH HOH ? H 5 HOH A 26 626 25 HOH HOH ? H 5 HOH A 27 627 42 HOH HOH ? H 5 HOH A 28 628 35 HOH HOH ? H 5 HOH A 29 629 9 HOH HOH ? H 5 HOH A 30 630 21 HOH HOH ? H 5 HOH A 31 631 29 HOH HOH ? H 5 HOH A 32 632 24 HOH HOH ? H 5 HOH A 33 633 17 HOH HOH ? H 5 HOH A 34 634 51 HOH HOH ? H 5 HOH A 35 635 37 HOH HOH ? H 5 HOH A 36 636 14 HOH HOH ? H 5 HOH A 37 637 52 HOH HOH ? H 5 HOH A 38 638 19 HOH HOH ? H 5 HOH A 39 639 4 HOH HOH ? H 5 HOH A 40 640 46 HOH HOH ? H 5 HOH A 41 641 13 HOH HOH ? H 5 HOH A 42 642 18 HOH HOH ? H 5 HOH A 43 643 12 HOH HOH ? H 5 HOH A 44 644 32 HOH HOH ? H 5 HOH A 45 645 36 HOH HOH ? H 5 HOH A 46 646 7 HOH HOH ? H 5 HOH A 47 647 58 HOH HOH ? H 5 HOH A 48 648 8 HOH HOH ? H 5 HOH A 49 649 48 HOH HOH ? H 5 HOH A 50 650 33 HOH HOH ? H 5 HOH A 51 651 65 HOH HOH ? H 5 HOH A 52 652 16 HOH HOH ? H 5 HOH A 53 653 68 HOH HOH ? H 5 HOH A 54 654 26 HOH HOH ? H 5 HOH A 55 655 11 HOH HOH ? H 5 HOH A 56 656 55 HOH HOH ? H 5 HOH A 57 657 49 HOH HOH ? H 5 HOH A 58 658 74 HOH HOH ? H 5 HOH A 59 659 60 HOH HOH ? H 5 HOH A 60 660 76 HOH HOH ? H 5 HOH A 61 661 71 HOH HOH ? H 5 HOH A 62 662 54 HOH HOH ? H 5 HOH A 63 663 40 HOH HOH ? H 5 HOH A 64 664 41 HOH HOH ? H 5 HOH A 65 665 20 HOH HOH ? H 5 HOH A 66 666 70 HOH HOH ? H 5 HOH A 67 667 75 HOH HOH ? H 5 HOH A 68 668 56 HOH HOH ? H 5 HOH A 69 669 50 HOH HOH ? H 5 HOH A 70 670 57 HOH HOH ? H 5 HOH A 71 671 73 HOH HOH ? H 5 HOH A 72 672 72 HOH HOH ? # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x -1.109 _atom_site.Cartn_y 5.719 _atom_site.Cartn_z 61.958 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.22 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 504 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 210 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #