data_8H1N # _model_server_result.job_id 1J8V0MSKCIotSot5aVDgvw _model_server_result.datetime_utc '2024-11-06 03:44:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8h1n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 8H1N # _exptl.entry_id 8H1N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 182.172 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description sorbitol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8H1N _cell.length_a 111.839 _cell.length_b 111.839 _cell.length_c 113.384 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8H1N _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 113.384 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O6' _chem_comp.formula_weight 182.172 _chem_comp.id SOR _chem_comp.mon_nstd_flag . _chem_comp.name sorbitol _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms D-sorbitol;D-glucitol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 SOR sing 294 n n C1 O1 SOR sing 295 n n C1 H11 SOR sing 296 n n C1 H12 SOR sing 297 n n C2 C3 SOR sing 298 n n C2 O2 SOR sing 299 n n C2 H2 SOR sing 300 n n C3 C4 SOR sing 301 n n C3 O3 SOR sing 302 n n C3 H3 SOR sing 303 n n C4 C5 SOR sing 304 n n C4 O4 SOR sing 305 n n C4 H4 SOR sing 306 n n C5 C6 SOR sing 307 n n C5 O5 SOR sing 308 n n C5 H5 SOR sing 309 n n C6 O6 SOR sing 310 n n C6 H61 SOR sing 311 n n C6 H62 SOR sing 312 n n O1 HO1 SOR sing 313 n n O2 HO2 SOR sing 314 n n O3 HO3 SOR sing 315 n n O4 HO4 SOR sing 316 n n O5 HO5 SOR sing 317 n n O6 HO6 SOR sing 318 n n # _atom_sites.entry_id 8H1N _atom_sites.fract_transf_matrix[1][1] 0.008941 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008941 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00882 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SOR A 1 501 501 SOR SOR . C 3 FMT A 1 502 501 FMT FMT . D 3 FMT A 1 503 502 FMT FMT . E 3 FMT A 1 504 503 FMT FMT . F 4 HOH A 1 601 3 HOH HOH . F 4 HOH A 2 602 93 HOH HOH . F 4 HOH A 3 603 33 HOH HOH . F 4 HOH A 4 604 97 HOH HOH . F 4 HOH A 5 605 6 HOH HOH . F 4 HOH A 6 606 13 HOH HOH . F 4 HOH A 7 607 37 HOH HOH . F 4 HOH A 8 608 26 HOH HOH . F 4 HOH A 9 609 113 HOH HOH . F 4 HOH A 10 610 2 HOH HOH . F 4 HOH A 11 611 61 HOH HOH . F 4 HOH A 12 612 4 HOH HOH . F 4 HOH A 13 613 27 HOH HOH . F 4 HOH A 14 614 7 HOH HOH . F 4 HOH A 15 615 5 HOH HOH . F 4 HOH A 16 616 69 HOH HOH . F 4 HOH A 17 617 105 HOH HOH . F 4 HOH A 18 618 106 HOH HOH . F 4 HOH A 19 619 101 HOH HOH . F 4 HOH A 20 620 114 HOH HOH . F 4 HOH A 21 621 80 HOH HOH . F 4 HOH A 22 622 64 HOH HOH . F 4 HOH A 23 623 48 HOH HOH . F 4 HOH A 24 624 94 HOH HOH . F 4 HOH A 25 625 12 HOH HOH . F 4 HOH A 26 626 112 HOH HOH . F 4 HOH A 27 627 74 HOH HOH . F 4 HOH A 28 628 16 HOH HOH . F 4 HOH A 29 629 8 HOH HOH . F 4 HOH A 30 630 79 HOH HOH . F 4 HOH A 31 631 23 HOH HOH . F 4 HOH A 32 632 9 HOH HOH . F 4 HOH A 33 633 44 HOH HOH . F 4 HOH A 34 634 54 HOH HOH . F 4 HOH A 35 635 17 HOH HOH . F 4 HOH A 36 636 102 HOH HOH . F 4 HOH A 37 637 71 HOH HOH . F 4 HOH A 38 638 49 HOH HOH . F 4 HOH A 39 639 10 HOH HOH . F 4 HOH A 40 640 36 HOH HOH . F 4 HOH A 41 641 35 HOH HOH . F 4 HOH A 42 642 14 HOH HOH . F 4 HOH A 43 643 76 HOH HOH . F 4 HOH A 44 644 47 HOH HOH . F 4 HOH A 45 645 56 HOH HOH . F 4 HOH A 46 646 57 HOH HOH . F 4 HOH A 47 647 120 HOH HOH . F 4 HOH A 48 648 77 HOH HOH . F 4 HOH A 49 649 68 HOH HOH . F 4 HOH A 50 650 108 HOH HOH . F 4 HOH A 51 651 52 HOH HOH . F 4 HOH A 52 652 28 HOH HOH . F 4 HOH A 53 653 72 HOH HOH . F 4 HOH A 54 654 32 HOH HOH . F 4 HOH A 55 655 38 HOH HOH . F 4 HOH A 56 656 78 HOH HOH . F 4 HOH A 57 657 89 HOH HOH . F 4 HOH A 58 658 66 HOH HOH . F 4 HOH A 59 659 100 HOH HOH . F 4 HOH A 60 660 29 HOH HOH . F 4 HOH A 61 661 25 HOH HOH . F 4 HOH A 62 662 42 HOH HOH . F 4 HOH A 63 663 41 HOH HOH . F 4 HOH A 64 664 43 HOH HOH . F 4 HOH A 65 665 18 HOH HOH . F 4 HOH A 66 666 15 HOH HOH . F 4 HOH A 67 667 60 HOH HOH . F 4 HOH A 68 668 39 HOH HOH . F 4 HOH A 69 669 99 HOH HOH . F 4 HOH A 70 670 51 HOH HOH . F 4 HOH A 71 671 73 HOH HOH . F 4 HOH A 72 672 19 HOH HOH . F 4 HOH A 73 673 62 HOH HOH . F 4 HOH A 74 674 45 HOH HOH . F 4 HOH A 75 675 11 HOH HOH . F 4 HOH A 76 676 22 HOH HOH . F 4 HOH A 77 677 88 HOH HOH . F 4 HOH A 78 678 116 HOH HOH . F 4 HOH A 79 679 70 HOH HOH . F 4 HOH A 80 680 121 HOH HOH . F 4 HOH A 81 681 34 HOH HOH . F 4 HOH A 82 682 58 HOH HOH . F 4 HOH A 83 683 109 HOH HOH . F 4 HOH A 84 684 107 HOH HOH . F 4 HOH A 85 685 87 HOH HOH . F 4 HOH A 86 686 30 HOH HOH . F 4 HOH A 87 687 103 HOH HOH . F 4 HOH A 88 688 104 HOH HOH . F 4 HOH A 89 689 31 HOH HOH . F 4 HOH A 90 690 24 HOH HOH . F 4 HOH A 91 691 21 HOH HOH . F 4 HOH A 92 692 1 HOH HOH . F 4 HOH A 93 693 46 HOH HOH . F 4 HOH A 94 694 84 HOH HOH . F 4 HOH A 95 695 98 HOH HOH . F 4 HOH A 96 696 86 HOH HOH . F 4 HOH A 97 697 96 HOH HOH . F 4 HOH A 98 698 20 HOH HOH . F 4 HOH A 99 699 81 HOH HOH . F 4 HOH A 100 700 55 HOH HOH . F 4 HOH A 101 701 53 HOH HOH . F 4 HOH A 102 702 63 HOH HOH . F 4 HOH A 103 703 91 HOH HOH . F 4 HOH A 104 704 40 HOH HOH . F 4 HOH A 105 705 85 HOH HOH . F 4 HOH A 106 706 67 HOH HOH . F 4 HOH A 107 707 110 HOH HOH . F 4 HOH A 108 708 92 HOH HOH . F 4 HOH A 109 709 90 HOH HOH . F 4 HOH A 110 710 82 HOH HOH . F 4 HOH A 111 711 83 HOH HOH . F 4 HOH A 112 712 59 HOH HOH . F 4 HOH A 113 713 95 HOH HOH . F 4 HOH A 114 714 118 HOH HOH . F 4 HOH A 115 715 50 HOH HOH . F 4 HOH A 116 716 65 HOH HOH . F 4 HOH A 117 717 75 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 SOR . B . B 2 55.414 23.264 53.11 0.83 50.03 ? C1 SOR 501 A 1 HETATM 2 C C2 SOR . B . B 2 56.485 22.185 53.099 0.83 55.78 ? C2 SOR 501 A 1 HETATM 3 C C3 SOR . B . B 2 56.143 21.07 54.085 0.83 61.1 ? C3 SOR 501 A 1 HETATM 4 C C4 SOR . B . B 2 56.787 19.739 53.705 0.83 51.79 ? C4 SOR 501 A 1 HETATM 5 C C5 SOR . B . B 2 56.946 18.832 54.922 0.83 52.52 ? C5 SOR 501 A 1 HETATM 6 C C6 SOR . B . B 2 57.369 17.426 54.508 0.83 50.55 ? C6 SOR 501 A 1 HETATM 7 O O1 SOR . B . B 2 55.329 23.815 51.813 0.83 45.16 ? O1 SOR 501 A 1 HETATM 8 O O2 SOR . B . B 2 56.581 21.68 51.788 0.83 58.68 ? O2 SOR 501 A 1 HETATM 9 O O3 SOR . B . B 2 54.742 20.914 54.135 0.83 69.05 ? O3 SOR 501 A 1 HETATM 10 O O4 SOR . B . B 2 55.99 19.084 52.745 0.83 44.73 ? O4 SOR 501 A 1 HETATM 11 O O5 SOR . B . B 2 57.925 19.372 55.78 0.83 53.76 ? O5 SOR 501 A 1 HETATM 12 O O6 SOR . B . B 2 57.94 16.748 55.607 0.83 40.96 ? O6 SOR 501 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 12 #