data_8H3Z # _model_server_result.job_id K3DJ-DbfNL39-cpdTX4USA _model_server_result.datetime_utc '2025-09-30 04:00:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8h3z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":308}' # _entry.id 8H3Z # _exptl.entry_id 8H3Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 25 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8H3Z _cell.length_a 59.697 _cell.length_b 69.41 _cell.length_c 114.31 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8H3Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 W N N ? 2 X N N ? 2 Y N N ? 2 Z N N ? 2 AA N N # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8H3Z _atom_sites.fract_transf_matrix[1][1] 0.016751 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014407 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008748 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 IOD A 1 301 27 IOD IOD . D 2 IOD A 1 302 28 IOD IOD . E 2 IOD A 1 303 34 IOD IOD . F 2 IOD A 1 304 39 IOD IOD . G 2 IOD A 1 305 40 IOD IOD . H 2 IOD A 1 306 43 IOD IOD . I 2 IOD A 1 307 44 IOD IOD . J 2 IOD A 1 308 47 IOD IOD . K 2 IOD A 1 309 50 IOD IOD . L 2 IOD A 1 310 51 IOD IOD . M 2 IOD A 1 311 52 IOD IOD . N 2 IOD A 1 312 54 IOD IOD . O 2 IOD B 1 301 29 IOD IOD . P 2 IOD B 1 302 30 IOD IOD . Q 2 IOD B 1 303 31 IOD IOD . R 2 IOD B 1 304 32 IOD IOD . S 2 IOD B 1 305 33 IOD IOD . T 2 IOD B 1 306 35 IOD IOD . U 2 IOD B 1 307 37 IOD IOD . V 2 IOD B 1 308 38 IOD IOD . W 2 IOD B 1 309 41 IOD IOD . X 2 IOD B 1 310 42 IOD IOD . Y 2 IOD B 1 311 45 IOD IOD . Z 2 IOD B 1 312 48 IOD IOD . AA 2 IOD B 1 313 53 IOD IOD . BA 3 HOH A 1 401 21 HOH HOH . BA 3 HOH A 2 402 41 HOH HOH . BA 3 HOH A 3 403 104 HOH HOH . BA 3 HOH A 4 404 100 HOH HOH . BA 3 HOH A 5 405 46 HOH HOH . BA 3 HOH A 6 406 101 HOH HOH . BA 3 HOH A 7 407 64 HOH HOH . BA 3 HOH A 8 408 103 HOH HOH . BA 3 HOH A 9 409 56 HOH HOH . BA 3 HOH A 10 410 7 HOH HOH . BA 3 HOH A 11 411 13 HOH HOH . BA 3 HOH A 12 412 38 HOH HOH . BA 3 HOH A 13 413 62 HOH HOH . BA 3 HOH A 14 414 39 HOH HOH . BA 3 HOH A 15 415 76 HOH HOH . BA 3 HOH A 16 416 81 HOH HOH . BA 3 HOH A 17 417 8 HOH HOH . BA 3 HOH A 18 418 40 HOH HOH . BA 3 HOH A 19 419 10 HOH HOH . BA 3 HOH A 20 420 85 HOH HOH . BA 3 HOH A 21 421 6 HOH HOH . BA 3 HOH A 22 422 59 HOH HOH . BA 3 HOH A 23 423 83 HOH HOH . BA 3 HOH A 24 424 73 HOH HOH . BA 3 HOH A 25 425 102 HOH HOH . BA 3 HOH A 26 426 63 HOH HOH . BA 3 HOH A 27 427 49 HOH HOH . BA 3 HOH A 28 428 34 HOH HOH . BA 3 HOH A 29 429 61 HOH HOH . BA 3 HOH A 30 430 45 HOH HOH . BA 3 HOH A 31 431 22 HOH HOH . BA 3 HOH A 32 432 71 HOH HOH . BA 3 HOH A 33 433 19 HOH HOH . BA 3 HOH A 34 434 15 HOH HOH . BA 3 HOH A 35 435 32 HOH HOH . BA 3 HOH A 36 436 91 HOH HOH . BA 3 HOH A 37 437 42 HOH HOH . BA 3 HOH A 38 438 105 HOH HOH . BA 3 HOH A 39 439 51 HOH HOH . BA 3 HOH A 40 440 92 HOH HOH . BA 3 HOH A 41 441 107 HOH HOH . BA 3 HOH A 42 442 11 HOH HOH . BA 3 HOH A 43 443 55 HOH HOH . BA 3 HOH A 44 444 93 HOH HOH . BA 3 HOH A 45 445 2 HOH HOH . BA 3 HOH A 46 446 80 HOH HOH . BA 3 HOH A 47 447 82 HOH HOH . BA 3 HOH A 48 448 14 HOH HOH . BA 3 HOH A 49 449 108 HOH HOH . BA 3 HOH A 50 450 115 HOH HOH . BA 3 HOH A 51 451 116 HOH HOH . BA 3 HOH A 52 452 114 HOH HOH . BA 3 HOH A 53 453 65 HOH HOH . BA 3 HOH A 54 454 94 HOH HOH . BA 3 HOH A 55 455 117 HOH HOH . CA 3 HOH B 1 401 53 HOH HOH . CA 3 HOH B 2 402 98 HOH HOH . CA 3 HOH B 3 403 50 HOH HOH . CA 3 HOH B 4 404 84 HOH HOH . CA 3 HOH B 5 405 112 HOH HOH . CA 3 HOH B 6 406 1 HOH HOH . CA 3 HOH B 7 407 95 HOH HOH . CA 3 HOH B 8 408 47 HOH HOH . CA 3 HOH B 9 409 57 HOH HOH . CA 3 HOH B 10 410 43 HOH HOH . CA 3 HOH B 11 411 97 HOH HOH . CA 3 HOH B 12 412 79 HOH HOH . CA 3 HOH B 13 413 12 HOH HOH . CA 3 HOH B 14 414 75 HOH HOH . CA 3 HOH B 15 415 33 HOH HOH . CA 3 HOH B 16 416 25 HOH HOH . CA 3 HOH B 17 417 48 HOH HOH . CA 3 HOH B 18 418 37 HOH HOH . CA 3 HOH B 19 419 36 HOH HOH . CA 3 HOH B 20 420 23 HOH HOH . CA 3 HOH B 21 421 69 HOH HOH . CA 3 HOH B 22 422 29 HOH HOH . CA 3 HOH B 23 423 96 HOH HOH . CA 3 HOH B 24 424 28 HOH HOH . CA 3 HOH B 25 425 86 HOH HOH . CA 3 HOH B 26 426 77 HOH HOH . CA 3 HOH B 27 427 68 HOH HOH . CA 3 HOH B 28 428 70 HOH HOH . CA 3 HOH B 29 429 35 HOH HOH . CA 3 HOH B 30 430 30 HOH HOH . CA 3 HOH B 31 431 72 HOH HOH . CA 3 HOH B 32 432 66 HOH HOH . CA 3 HOH B 33 433 78 HOH HOH . CA 3 HOH B 34 434 106 HOH HOH . CA 3 HOH B 35 435 58 HOH HOH . CA 3 HOH B 36 436 88 HOH HOH . CA 3 HOH B 37 437 89 HOH HOH . CA 3 HOH B 38 438 113 HOH HOH . CA 3 HOH B 39 439 99 HOH HOH . CA 3 HOH B 40 440 60 HOH HOH . CA 3 HOH B 41 441 67 HOH HOH . CA 3 HOH B 42 442 87 HOH HOH . CA 3 HOH B 43 443 24 HOH HOH . CA 3 HOH B 44 444 109 HOH HOH . CA 3 HOH B 45 445 17 HOH HOH . CA 3 HOH B 46 446 111 HOH HOH . CA 3 HOH B 47 447 110 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id V _atom_site.label_entity_id 2 _atom_site.Cartn_x 42.826 _atom_site.Cartn_y 15.017 _atom_site.Cartn_z 75.102 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 94.56 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 308 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #