data_8H4L # _model_server_result.job_id LF6q6FTtPT2ib4STCdLYXw _model_server_result.datetime_utc '2025-03-05 23:49:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8h4l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 8H4L # _exptl.entry_id 8H4L _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 328.488 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DOCOSA-4,7,10,13,16,19-HEXAENOIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id E _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 111 _struct_conn.ptnr1_auth_asym_id R _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 111 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id E _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 194 _struct_conn.ptnr2_auth_asym_id R _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 194 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.037 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C22 H32 O2' _chem_comp.formula_weight 328.488 _chem_comp.id HXA _chem_comp.mon_nstd_flag . _chem_comp.name 'DOCOSA-4,7,10,13,16,19-HEXAENOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HXA doub 150 n n C1 O2 HXA sing 151 n n C1 C2 HXA sing 152 n n O2 HO2 HXA sing 153 n n C2 C3 HXA sing 154 n n C2 H21 HXA sing 155 n n C2 H22 HXA sing 156 n n C3 C4 HXA sing 157 n n C3 H31 HXA sing 158 n n C3 H32 HXA sing 159 n n C4 C5 HXA doub 160 z n C4 H4 HXA sing 161 n n C5 C6 HXA sing 162 n n C5 H5 HXA sing 163 n n C6 C7 HXA sing 164 n n C6 H61 HXA sing 165 n n C6 H62 HXA sing 166 n n C7 C8 HXA doub 167 z n C7 H7 HXA sing 168 n n C8 C9 HXA sing 169 n n C8 H8 HXA sing 170 n n C9 C10 HXA sing 171 n n C9 H91 HXA sing 172 n n C9 H92 HXA sing 173 n n C10 C11 HXA doub 174 z n C10 H10 HXA sing 175 n n C11 C12 HXA sing 176 n n C11 H11 HXA sing 177 n n C12 C13 HXA sing 178 n n C12 H121 HXA sing 179 n n C12 H122 HXA sing 180 n n C13 C14 HXA doub 181 z n C13 H13 HXA sing 182 n n C14 C15 HXA sing 183 n n C14 H14 HXA sing 184 n n C15 C16 HXA sing 185 n n C15 H151 HXA sing 186 n n C15 H152 HXA sing 187 n n C16 C17 HXA doub 188 z n C16 H16 HXA sing 189 n n C17 C18 HXA sing 190 n n C17 H17 HXA sing 191 n n C18 C19 HXA sing 192 n n C18 H181 HXA sing 193 n n C18 H182 HXA sing 194 n n C19 C20 HXA doub 195 z n C19 H19 HXA sing 196 n n C20 C21 HXA sing 197 n n C20 H20 HXA sing 198 n n C21 C22 HXA sing 199 n n C21 H211 HXA sing 200 n n C21 H212 HXA sing 201 n n C22 H221 HXA sing 202 n n C22 H222 HXA sing 203 n n C22 H223 HXA sing 204 n n # _atom_sites.entry_id 8H4L _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id F _pdbx_nonpoly_scheme.entity_id 6 _pdbx_nonpoly_scheme.mon_id HXA _pdbx_nonpoly_scheme.pdb_strand_id R _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 401 _pdbx_nonpoly_scheme.pdb_mon_id HXA _pdbx_nonpoly_scheme.auth_mon_id HXA _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HXA . . . F 6 138.649 147.101 97.724 1 69.38 ? C1 HXA 401 R 1 HETATM 2 O O1 HXA . . . F 6 139.323 146.648 96.759 1 69.38 ? O1 HXA 401 R 1 HETATM 3 O O2 HXA . . . F 6 138.074 148.2 97.744 1 69.38 ? O2 HXA 401 R 1 HETATM 4 C C2 HXA . . . F 6 138.521 146.224 98.988 1 69.38 ? C2 HXA 401 R 1 HETATM 5 C C3 HXA . . . F 6 139.49 145.074 98.956 1 69.38 ? C3 HXA 401 R 1 HETATM 6 C C4 HXA . . . F 6 140.893 145.53 99.087 1 69.38 ? C4 HXA 401 R 1 HETATM 7 C C5 HXA . . . F 6 141.691 145.058 100.023 1 69.38 ? C5 HXA 401 R 1 HETATM 8 C C6 HXA . . . F 6 141.212 144.053 100.972 1 69.38 ? C6 HXA 401 R 1 HETATM 9 C C7 HXA . . . F 6 142.093 142.89 100.922 1 69.38 ? C7 HXA 401 R 1 HETATM 10 C C8 HXA . . . F 6 142.349 142.189 102.004 1 69.38 ? C8 HXA 401 R 1 HETATM 11 C C9 HXA . . . F 6 141.749 142.567 103.288 1 69.38 ? C9 HXA 401 R 1 HETATM 12 C C10 HXA . . . F 6 142.754 142.458 104.357 1 69.38 ? C10 HXA 401 R 1 HETATM 13 C C11 HXA . . . F 6 143.967 141.985 104.119 1 69.38 ? C11 HXA 401 R 1 HETATM 14 C C12 HXA . . . F 6 144.936 141.9 105.226 1 69.38 ? C12 HXA 401 R 1 HETATM 15 C C13 HXA . . . F 6 144.204 141.742 106.497 1 69.38 ? C13 HXA 401 R 1 HETATM 16 C C14 HXA . . . F 6 144.036 142.747 107.338 1 69.38 ? C14 HXA 401 R 1 HETATM 17 C C15 HXA . . . F 6 143.29 142.535 108.589 1 69.38 ? C15 HXA 401 R 1 HETATM 18 C C16 HXA . . . F 6 143.282 143.763 109.384 1 69.38 ? C16 HXA 401 R 1 HETATM 19 C C17 HXA . . . F 6 142.188 144.488 109.504 1 69.38 ? C17 HXA 401 R 1 HETATM 20 C C18 HXA . . . F 6 140.928 144.1 108.848 1 69.38 ? C18 HXA 401 R 1 HETATM 21 C C19 HXA . . . F 6 140.424 145.2 108.012 1 69.38 ? C19 HXA 401 R 1 HETATM 22 C C20 HXA . . . F 6 139.732 146.21 108.519 1 69.38 ? C20 HXA 401 R 1 HETATM 23 C C21 HXA . . . F 6 139.415 146.324 109.966 1 69.38 ? C21 HXA 401 R 1 HETATM 24 C C22 HXA . . . F 6 137.998 145.862 110.229 1 69.38 ? C22 HXA 401 R 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 210 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 24 #