data_8H75
#
_model_server_result.job_id            VA-ubuUmPFprNwGiEYUIcQ 
_model_server_result.datetime_utc      '2025-07-05 14:52:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8h75 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":1001}' 
#
_entry.id    8H75 
#
_exptl.entry_id    8H75 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              394.857 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            Tinengotinib 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.94 
_cell.angle_gamma         90 
_cell.entry_id            8H75 
_cell.length_a            43.022 
_cell.length_b            198.595 
_cell.length_c            67.203 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8H75 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ASP 199 A ASP 655 1_555 A N PTR 200 A PTR 656 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale2 A C PTR 200 A PTR 656 1_555 A N TYR 201 A TYR 657 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale3 B C ASP 199 B ASP 655 1_555 B N PTR 200 B PTR 656 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale4 B C PTR 200 B PTR 656 1_555 B N TYR 201 B TYR 657 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? 
#
_chem_comp.formula           'C20 H19 Cl N6 O' 
_chem_comp.formula_weight    394.857 
_chem_comp.id                KX0 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              Tinengotinib 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     4-[9-(2-chlorophenyl)-6-methyl-2,4,5,8,12-pentazatricyclo[8.4.0.0^{3,7}]tetradeca-1(10),3,6,8,11,13-hexaen-13-yl]morpholine 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C09 C10 KX0 sing 173 n y 
C09 C08 KX0 doub 174 n y 
C10 C11 KX0 doub 175 n y 
C08 C07 KX0 sing 176 n y 
C11 CL1 KX0 sing 177 n n 
C11 C06 KX0 sing 178 n y 
C07 C06 KX0 doub 179 n y 
C06 C05 KX0 sing 180 n n 
C22 N21 KX0 doub 181 n y 
C22 C13 KX0 sing 182 n y 
N21 C20 KX0 sing 183 n y 
O26 C27 KX0 sing 184 n n 
O26 C25 KX0 sing 185 n n 
C28 C27 KX0 sing 186 n n 
C28 N23 KX0 sing 187 n n 
C05 C13 KX0 sing 188 n n 
C05 N04 KX0 doub 189 n n 
C24 C25 KX0 sing 190 n n 
C24 N23 KX0 sing 191 n n 
C13 C14 KX0 doub 192 n y 
C20 N23 KX0 sing 193 n n 
C20 C19 KX0 doub 194 n y 
N04 C03 KX0 sing 195 n n 
C14 C19 KX0 sing 196 n y 
C14 N15 KX0 sing 197 n n 
C03 C02 KX0 doub 198 n y 
C03 C16 KX0 sing 199 n y 
C01 C02 KX0 sing 200 n n 
N15 C16 KX0 sing 201 n n 
C02 N18 KX0 sing 202 n y 
C16 N17 KX0 doub 203 n y 
N18 N17 KX0 sing 204 n y 
C10 H1 KX0 sing 205 n n 
C22 H2 KX0 sing 206 n n 
C24 H3 KX0 sing 207 n n 
C24 H4 KX0 sing 208 n n 
C28 H5 KX0 sing 209 n n 
C28 H6 KX0 sing 210 n n 
C01 H7 KX0 sing 211 n n 
C01 H8 KX0 sing 212 n n 
C01 H9 KX0 sing 213 n n 
C07 H11 KX0 sing 214 n n 
C08 H12 KX0 sing 215 n n 
C09 H13 KX0 sing 216 n n 
C19 H14 KX0 sing 217 n n 
C25 H15 KX0 sing 218 n n 
C25 H16 KX0 sing 219 n n 
C27 H17 KX0 sing 220 n n 
C27 H18 KX0 sing 221 n n 
N15 H20 KX0 sing 222 n n 
N18 H10 KX0 sing 223 n n 
#
_atom_sites.entry_id                     8H75 
_atom_sites.fract_transf_matrix[1][1]    0.023244 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001194 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005035 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.0149 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 KX0 A 1 1001 1001 KX0 LIG . 
F 3 CL A 1 1002 1 CL CL . 
G 2 KX0 B 1 1001 1001 KX0 LIG . 
H 2 KX0 C 1 1001 1001 KX0 LIG . 
I 2 KX0 D 1 1001 1001 KX0 LIG . 
J 4 HOH A 1 1101 7 HOH HOH . 
J 4 HOH A 2 1102 38 HOH HOH . 
J 4 HOH A 3 1103 36 HOH HOH . 
J 4 HOH A 4 1104 5 HOH HOH . 
K 4 HOH B 1 1101 34 HOH HOH . 
K 4 HOH B 2 1102 8 HOH HOH . 
K 4 HOH B 3 1103 42 HOH HOH . 
K 4 HOH B 4 1104 35 HOH HOH . 
K 4 HOH B 5 1105 14 HOH HOH . 
K 4 HOH B 6 1106 17 HOH HOH . 
L 4 HOH C 1 1101 23 HOH HOH . 
L 4 HOH C 2 1102 4 HOH HOH . 
L 4 HOH C 3 1103 46 HOH HOH . 
L 4 HOH C 4 1104 48 HOH HOH . 
L 4 HOH C 5 1105 43 HOH HOH . 
L 4 HOH C 6 1106 22 HOH HOH . 
M 4 HOH D 1 1101 40 HOH HOH . 
M 4 HOH D 2 1102 49 HOH HOH . 
M 4 HOH D 3 1103 27 HOH HOH . 
M 4 HOH D 4 1104 2 HOH HOH . 
M 4 HOH D 5 1105 1 HOH HOH . 
M 4 HOH D 6 1106 21 HOH HOH . 
M 4 HOH D 7 1107 25 HOH HOH . 
M 4 HOH D 8 1108 31 HOH HOH . 
M 4 HOH D 9 1109 15 HOH HOH . 
M 4 HOH D 10 1110 29 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 KX0 . . . H 2 -0.02 -5.816 6.135 1 83.04 ? C10 KX0 1001 C 1 
HETATM 2 C C13 KX0 . . . H 2 -3.63 -6.644 2.868 1 62.71 ? C13 KX0 1001 C 1 
HETATM 3 C C20 KX0 . . . H 2 -5.951 -8.118 2.713 1 76.69 ? C20 KX0 1001 C 1 
HETATM 4 C C22 KX0 . . . H 2 -4.101 -7.458 3.913 1 67.79 ? C22 KX0 1001 C 1 
HETATM 5 C C24 KX0 . . . H 2 -8.402 -8.236 2.335 1 70.03 ? C24 KX0 1001 C 1 
HETATM 6 C C28 KX0 . . . H 2 -7.425 -9.717 3.842 1 58.84 ? C28 KX0 1001 C 1 
HETATM 7 C C01 KX0 . . . H 2 0.177 -3.036 0.611 1 61.52 ? C01 KX0 1001 C 1 
HETATM 8 C C02 KX0 . . . H 2 -1.055 -3.786 0.142 1 58.45 ? C02 KX0 1001 C 1 
HETATM 9 C C03 KX0 . . . H 2 -1.968 -4.476 0.939 1 62.41 ? C03 KX0 1001 C 1 
HETATM 10 C C05 KX0 . . . H 2 -2.32 -5.882 3.106 1 68.42 ? C05 KX0 1001 C 1 
HETATM 11 C C06 KX0 . . . H 2 -1.455 -6.302 4.284 1 74.32 ? C06 KX0 1001 C 1 
HETATM 12 C C07 KX0 . . . H 2 -1.336 -7.637 4.569 1 70.48 ? C07 KX0 1001 C 1 
HETATM 13 C C08 KX0 . . . H 2 -0.572 -8.066 5.632 1 75.1 ? C08 KX0 1001 C 1 
HETATM 14 C C09 KX0 . . . H 2 0.095 -7.156 6.421 1 75.8 ? C09 KX0 1001 C 1 
HETATM 15 C C11 KX0 . . . H 2 -0.789 -5.392 5.074 1 82.54 ? C11 KX0 1001 C 1 
HETATM 16 C C14 KX0 . . . H 2 -4.378 -6.576 1.719 1 63.37 ? C14 KX0 1001 C 1 
HETATM 17 C C16 KX0 . . . H 2 -2.902 -5.001 0.104 1 61.19 ? C16 KX0 1001 C 1 
HETATM 18 C C19 KX0 . . . H 2 -5.568 -7.337 1.641 1 73.23 ? C19 KX0 1001 C 1 
HETATM 19 C C25 KX0 . . . H 2 -9.561 -9.203 2.191 1 65.68 ? C25 KX0 1001 C 1 
HETATM 20 C C27 KX0 . . . H 2 -8.583 -10.671 3.63 1 62.18 ? C27 KX0 1001 C 1 
HETATM 21 N N04 KX0 . . . H 2 -2.017 -4.685 2.376 1 71.68 ? N04 KX0 1001 C 1 
HETATM 22 N N15 KX0 . . . H 2 -4.065 -5.792 0.514 1 62.07 ? N15 KX0 1001 C 1 
HETATM 23 N N17 KX0 . . . H 2 -2.598 -4.65 -1.168 1 60.6 ? N17 KX0 1001 C 1 
HETATM 24 N N18 KX0 . . . H 2 -1.453 -3.904 -1.101 1 57.47 ? N18 KX0 1001 C 1 
HETATM 25 N N21 KX0 . . . H 2 -5.215 -8.16 3.811 1 77.11 ? N21 KX0 1001 C 1 
HETATM 26 N N23 KX0 . . . H 2 -7.155 -8.904 2.667 1 67.3 ? N23 KX0 1001 C 1 
HETATM 27 O O26 KX0 . . . H 2 -9.728 -9.981 3.315 1 67.67 ? O26 KX0 1001 C 1 
HETATM 28 CL CL1 KX0 . . . H 2 -0.867 -3.648 4.772 1 82.1 ? CL1 KX0 1001 C 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           410 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           28 
#