data_8H81 # _model_server_result.job_id NJjCn1MUDPY7HpB69_ENAw _model_server_result.datetime_utc '2024-11-27 18:58:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8h81 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 8H81 # _exptl.entry_id 8H81 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 131.13 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-HYDROXYPROLINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8H81 _cell.length_a 75.289 _cell.length_b 75.289 _cell.length_c 144.544 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8H81 _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H9 N O3' _chem_comp.formula_weight 131.13 _chem_comp.id HYP _chem_comp.mon_nstd_flag n _chem_comp.name 4-HYDROXYPROLINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms HYDROXYPROLINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA HYP sing 152 n n N CD HYP sing 153 n n N H HYP sing 154 n n CA C HYP sing 155 n n CA CB HYP sing 156 n n CA HA HYP sing 157 n n C O HYP doub 158 n n C OXT HYP sing 159 n n CB CG HYP sing 160 n n CB HB2 HYP sing 161 n n CB HB3 HYP sing 162 n n CG CD HYP sing 163 n n CG OD1 HYP sing 164 n n CG HG HYP sing 165 n n CD HD22 HYP sing 166 n n CD HD23 HYP sing 167 n n OD1 HD1 HYP sing 168 n n OXT HXT HYP sing 169 n n # _atom_sites.entry_id 8H81 _atom_sites.fract_transf_matrix[1][1] 0.013282 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013282 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006918 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HYP A 1 301 301 HYP HYP . C 3 HOH A 1 401 406 HOH HOH . C 3 HOH A 2 402 401 HOH HOH . C 3 HOH A 3 403 30 HOH HOH . C 3 HOH A 4 404 402 HOH HOH . C 3 HOH A 5 405 425 HOH HOH . C 3 HOH A 6 406 409 HOH HOH . C 3 HOH A 7 407 421 HOH HOH . C 3 HOH A 8 408 403 HOH HOH . C 3 HOH A 9 409 407 HOH HOH . C 3 HOH A 10 410 450 HOH HOH . C 3 HOH A 11 411 430 HOH HOH . C 3 HOH A 12 412 423 HOH HOH . C 3 HOH A 13 413 438 HOH HOH . C 3 HOH A 14 414 431 HOH HOH . C 3 HOH A 15 415 32 HOH HOH . C 3 HOH A 16 416 424 HOH HOH . C 3 HOH A 17 417 405 HOH HOH . C 3 HOH A 18 418 411 HOH HOH . C 3 HOH A 19 419 412 HOH HOH . C 3 HOH A 20 420 420 HOH HOH . C 3 HOH A 21 421 21 HOH HOH . C 3 HOH A 22 422 410 HOH HOH . C 3 HOH A 23 423 2 HOH HOH . C 3 HOH A 24 424 416 HOH HOH . C 3 HOH A 25 425 434 HOH HOH . C 3 HOH A 26 426 8 HOH HOH . C 3 HOH A 27 427 448 HOH HOH . C 3 HOH A 28 428 442 HOH HOH . C 3 HOH A 29 429 404 HOH HOH . C 3 HOH A 30 430 9 HOH HOH . C 3 HOH A 31 431 419 HOH HOH . C 3 HOH A 32 432 422 HOH HOH . C 3 HOH A 33 433 3 HOH HOH . C 3 HOH A 34 434 432 HOH HOH . C 3 HOH A 35 435 486 HOH HOH . C 3 HOH A 36 436 445 HOH HOH . C 3 HOH A 37 437 429 HOH HOH . C 3 HOH A 38 438 447 HOH HOH . C 3 HOH A 39 439 470 HOH HOH . C 3 HOH A 40 440 473 HOH HOH . C 3 HOH A 41 441 501 HOH HOH . C 3 HOH A 42 442 462 HOH HOH . C 3 HOH A 43 443 446 HOH HOH . C 3 HOH A 44 444 452 HOH HOH . C 3 HOH A 45 445 467 HOH HOH . C 3 HOH A 46 446 427 HOH HOH . C 3 HOH A 47 447 19 HOH HOH . C 3 HOH A 48 448 497 HOH HOH . C 3 HOH A 49 449 14 HOH HOH . C 3 HOH A 50 450 460 HOH HOH . C 3 HOH A 51 451 491 HOH HOH . C 3 HOH A 52 452 465 HOH HOH . C 3 HOH A 53 453 413 HOH HOH . C 3 HOH A 54 454 439 HOH HOH . C 3 HOH A 55 455 441 HOH HOH . C 3 HOH A 56 456 440 HOH HOH . C 3 HOH A 57 457 415 HOH HOH . C 3 HOH A 58 458 444 HOH HOH . C 3 HOH A 59 459 436 HOH HOH . C 3 HOH A 60 460 443 HOH HOH . C 3 HOH A 61 461 474 HOH HOH . C 3 HOH A 62 462 457 HOH HOH . C 3 HOH A 63 463 428 HOH HOH . C 3 HOH A 64 464 426 HOH HOH . C 3 HOH A 65 465 461 HOH HOH . C 3 HOH A 66 466 437 HOH HOH . C 3 HOH A 67 467 494 HOH HOH . C 3 HOH A 68 468 455 HOH HOH . C 3 HOH A 69 469 479 HOH HOH . C 3 HOH A 70 470 468 HOH HOH . C 3 HOH A 71 471 433 HOH HOH . C 3 HOH A 72 472 472 HOH HOH . C 3 HOH A 73 473 456 HOH HOH . C 3 HOH A 74 474 539 HOH HOH . C 3 HOH A 75 475 418 HOH HOH . C 3 HOH A 76 476 475 HOH HOH . C 3 HOH A 77 477 477 HOH HOH . C 3 HOH A 78 478 476 HOH HOH . C 3 HOH A 79 479 31 HOH HOH . C 3 HOH A 80 480 466 HOH HOH . C 3 HOH A 81 481 487 HOH HOH . C 3 HOH A 82 482 417 HOH HOH . C 3 HOH A 83 483 458 HOH HOH . C 3 HOH A 84 484 482 HOH HOH . C 3 HOH A 85 485 574 HOH HOH . C 3 HOH A 86 486 510 HOH HOH . C 3 HOH A 87 487 435 HOH HOH . C 3 HOH A 88 488 488 HOH HOH . C 3 HOH A 89 489 483 HOH HOH . C 3 HOH A 90 490 496 HOH HOH . C 3 HOH A 91 491 528 HOH HOH . C 3 HOH A 92 492 29 HOH HOH . C 3 HOH A 93 493 485 HOH HOH . C 3 HOH A 94 494 507 HOH HOH . C 3 HOH A 95 495 508 HOH HOH . C 3 HOH A 96 496 469 HOH HOH . C 3 HOH A 97 497 481 HOH HOH . C 3 HOH A 98 498 504 HOH HOH . C 3 HOH A 99 499 493 HOH HOH . C 3 HOH A 100 500 499 HOH HOH . C 3 HOH A 101 501 509 HOH HOH . C 3 HOH A 102 502 463 HOH HOH . C 3 HOH A 103 503 512 HOH HOH . C 3 HOH A 104 504 500 HOH HOH . C 3 HOH A 105 505 523 HOH HOH . C 3 HOH A 106 506 502 HOH HOH . C 3 HOH A 107 507 522 HOH HOH . C 3 HOH A 108 508 517 HOH HOH . C 3 HOH A 109 509 520 HOH HOH . C 3 HOH A 110 510 489 HOH HOH . C 3 HOH A 111 511 484 HOH HOH . C 3 HOH A 112 512 511 HOH HOH . C 3 HOH A 113 513 506 HOH HOH . C 3 HOH A 114 514 519 HOH HOH . C 3 HOH A 115 515 495 HOH HOH . C 3 HOH A 116 516 12 HOH HOH . C 3 HOH A 117 517 503 HOH HOH . C 3 HOH A 118 518 532 HOH HOH . C 3 HOH A 119 519 515 HOH HOH . C 3 HOH A 120 520 527 HOH HOH . C 3 HOH A 121 521 478 HOH HOH . C 3 HOH A 122 522 524 HOH HOH . C 3 HOH A 123 523 531 HOH HOH . C 3 HOH A 124 524 13 HOH HOH . C 3 HOH A 125 525 15 HOH HOH . C 3 HOH A 126 526 536 HOH HOH . C 3 HOH A 127 527 516 HOH HOH . C 3 HOH A 128 528 525 HOH HOH . C 3 HOH A 129 529 542 HOH HOH . C 3 HOH A 130 530 546 HOH HOH . C 3 HOH A 131 531 530 HOH HOH . C 3 HOH A 132 532 521 HOH HOH . C 3 HOH A 133 533 10 HOH HOH . C 3 HOH A 134 534 569 HOH HOH . C 3 HOH A 135 535 1 HOH HOH . C 3 HOH A 136 536 544 HOH HOH . C 3 HOH A 137 537 556 HOH HOH . C 3 HOH A 138 538 548 HOH HOH . C 3 HOH A 139 539 552 HOH HOH . C 3 HOH A 140 540 36 HOH HOH . C 3 HOH A 141 541 547 HOH HOH . C 3 HOH A 142 542 557 HOH HOH . C 3 HOH A 143 543 17 HOH HOH . C 3 HOH A 144 544 549 HOH HOH . C 3 HOH A 145 545 545 HOH HOH . C 3 HOH A 146 546 49 HOH HOH . C 3 HOH A 147 547 555 HOH HOH . C 3 HOH A 148 548 553 HOH HOH . C 3 HOH A 149 549 567 HOH HOH . C 3 HOH A 150 550 564 HOH HOH . C 3 HOH A 151 551 563 HOH HOH . C 3 HOH A 152 552 565 HOH HOH . C 3 HOH A 153 553 568 HOH HOH . C 3 HOH A 154 554 28 HOH HOH . C 3 HOH A 155 555 571 HOH HOH . C 3 HOH A 156 556 570 HOH HOH . C 3 HOH A 157 557 572 HOH HOH . C 3 HOH A 158 558 50 HOH HOH . C 3 HOH A 159 559 577 HOH HOH . C 3 HOH A 160 560 573 HOH HOH . C 3 HOH A 161 561 578 HOH HOH . C 3 HOH A 162 562 579 HOH HOH . C 3 HOH A 163 563 576 HOH HOH . C 3 HOH A 164 564 51 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N HYP . . . B 2 -23.562 13.94 -12.03 1 40.69 ? N HYP 301 A 1 HETATM 2 C CA HYP . . . B 2 -22.548 13.286 -12.873 1 44.82 ? CA HYP 301 A 1 HETATM 3 C C HYP . . . B 2 -21.934 14.295 -13.859 1 38.86 ? C HYP 301 A 1 HETATM 4 O O HYP . . . B 2 -20.973 13.937 -14.528 1 37.58 ? O HYP 301 A 1 HETATM 5 C CB HYP . . . B 2 -23.316 12.167 -13.595 1 46.49 ? CB HYP 301 A 1 HETATM 6 C CG HYP . . . B 2 -24.558 11.95 -12.744 1 47.34 ? CG HYP 301 A 1 HETATM 7 C CD HYP . . . B 2 -24.879 13.334 -12.236 1 43.68 ? CD HYP 301 A 1 HETATM 8 O OD1 HYP . . . B 2 -24.262 11.071 -11.666 1 48.77 ? OD1 HYP 301 A 1 HETATM 9 O OXT HYP . . . B 2 -22.446 15.395 -13.889 1 44.34 ? OXT HYP 301 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 9 #