data_8HBF
#
_model_server_result.job_id            Jkgcuew90hzVx9iMmA_roQ 
_model_server_result.datetime_utc      '2024-10-19 03:45:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8hbf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":702}' 
#
_entry.id    8HBF 
#
_exptl.entry_id    8HBF 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              422.416 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'methyl ~{N}-[4,6-bis(azanyl)-2-[1-[(2-fluorophenyl)methyl]pyrazolo[3,4-b]pyridin-3-yl]pyrimidin-5-yl]-~{N}-methyl-carbamate' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8HBF 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8HBF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 486 A ASP 486 1_555 D MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.85 ? 
metalc ? metalc2 A OD1 ASP 486 A ASP 486 1_555 E MG MG . A MG 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? 
metalc ? metalc3 A OD2 ASP 486 A ASP 486 1_555 E MG MG . A MG 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? 
metalc ? metalc4 A O ILE 487 A ILE 487 1_555 E MG MG . A MG 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? 
metalc ? metalc5 A OD2 ASP 530 A ASP 530 1_555 D MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.82 ? 
metalc ? metalc6 A OD2 ASP 530 A ASP 530 1_555 E MG MG . A MG 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.75 ? 
metalc ? metalc7 C O5' G2P . A G2P 1001 1_555 D MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.951 ? 
metalc ? metalc8 C O3B G2P . A G2P 1001 1_555 E MG MG . A MG 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
metalc ? metalc9 C O2B G2P . A G2P 1001 1_555 E MG MG . A MG 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.732 ? 
metalc ? metalc10 F FE HEM . B HEM 701 1_555 H N NO . B NO 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.792 ? 
#
_chem_comp.formula           'C20 H19 F N8 O2' 
_chem_comp.formula_weight    422.416 
_chem_comp.id                GZO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'methyl ~{N}-[4,6-bis(azanyl)-2-[1-[(2-fluorophenyl)methyl]pyrazolo[3,4-b]pyridin-3-yl]pyrimidin-5-yl]-~{N}-methyl-carbamate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C27 C28 GZO doub 181 n y 
C27 C22 GZO sing 182 n y 
C28 C26 GZO sing 183 n y 
C22 C16 GZO doub 184 n y 
C20 C25 GZO sing 185 n y 
C20 C18 GZO doub 186 n y 
C25 N06 GZO doub 187 n y 
C26 C21 GZO doub 188 n y 
C18 C12 GZO sing 189 n y 
N06 C13 GZO sing 190 n y 
C29 N09 GZO sing 191 n n 
C16 C21 GZO sing 192 n y 
C16 C14 GZO sing 193 n n 
C12 C13 GZO doub 194 n y 
C12 C15 GZO sing 195 n y 
C13 N04 GZO sing 196 n y 
C21 F01 GZO sing 197 n n 
N10 C23 GZO sing 198 n n 
N07 C23 GZO doub 199 n y 
N07 C17 GZO sing 200 n y 
C23 C19 GZO sing 201 n y 
C15 C17 GZO sing 202 n n 
C15 N05 GZO doub 203 n y 
N04 C14 GZO sing 204 n n 
N04 N05 GZO sing 205 n y 
C17 N08 GZO doub 206 n y 
C19 N09 GZO sing 207 n n 
C19 C24 GZO doub 208 n y 
N09 C30 GZO sing 209 n n 
N08 C24 GZO sing 210 n y 
C24 N11 GZO sing 211 n n 
O03 C30 GZO doub 212 n n 
C30 O02 GZO sing 213 n n 
O02 C31 GZO sing 214 n n 
C14 H1 GZO sing 215 n n 
C14 H2 GZO sing 216 n n 
C18 H3 GZO sing 217 n n 
C20 H4 GZO sing 218 n n 
C22 H5 GZO sing 219 n n 
C25 H6 GZO sing 220 n n 
C26 H7 GZO sing 221 n n 
C27 H8 GZO sing 222 n n 
C28 H9 GZO sing 223 n n 
C29 H10 GZO sing 224 n n 
C29 H11 GZO sing 225 n n 
C29 H12 GZO sing 226 n n 
C31 H13 GZO sing 227 n n 
C31 H14 GZO sing 228 n n 
C31 H15 GZO sing 229 n n 
N10 H16 GZO sing 230 n n 
N10 H17 GZO sing 231 n n 
N11 H18 GZO sing 232 n n 
N11 H19 GZO sing 233 n n 
#
_atom_sites.entry_id                     8HBF 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 G2P A 1 1001 1001 G2P G2P . 
D 4 MG A 1 1002 1002 MG MG . 
E 4 MG A 1 1003 1003 MG MG . 
F 5 HEM B 1 701 701 HEM HEM . 
G 6 GZO B 1 702 702 GZO Rio . 
H 7 NO B 1 703 802 NO NO . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C12 GZO . . . G 6 135.851 144.05 122.831 1 18.29 ? C12 GZO 702 B 1 
HETATM 2 C C13 GZO . . . G 6 135.337 143.889 121.565 1 23.25 ? C13 GZO 702 B 1 
HETATM 3 C C14 GZO . . . G 6 134.029 142.159 120.373 1 28.91 ? C14 GZO 702 B 1 
HETATM 4 C C15 GZO . . . G 6 135.519 142.932 123.573 1 27.56 ? C15 GZO 702 B 1 
HETATM 5 C C16 GZO . . . G 6 132.542 142.43 120.473 1 24.85 ? C16 GZO 702 B 1 
HETATM 6 C C17 GZO . . . G 6 135.856 142.67 125.032 1 24.14 ? C17 GZO 702 B 1 
HETATM 7 C C18 GZO . . . G 6 136.642 145.321 123.176 1 22.88 ? C18 GZO 702 B 1 
HETATM 8 C C19 GZO . . . G 6 136.436 142.119 127.853 1 26.26 ? C19 GZO 702 B 1 
HETATM 9 C C20 GZO . . . G 6 136.845 146.352 122.157 1 29.5 ? C20 GZO 702 B 1 
HETATM 10 C C21 GZO . . . G 6 131.619 141.32 120.921 1 28.9 ? C21 GZO 702 B 1 
HETATM 11 C C22 GZO . . . G 6 131.987 143.794 120.125 1 26.97 ? C22 GZO 702 B 1 
HETATM 12 C C23 GZO . . . G 6 137.155 143.217 127.14 1 28.38 ? C23 GZO 702 B 1 
HETATM 13 C C24 GZO . . . G 6 135.425 141.311 127.125 1 24.13 ? C24 GZO 702 B 1 
HETATM 14 C C25 GZO . . . G 6 136.291 146.173 120.801 1 26.43 ? C25 GZO 702 B 1 
HETATM 15 C C26 GZO . . . G 6 130.125 141.551 121.028 1 22.6 ? C26 GZO 702 B 1 
HETATM 16 C C27 GZO . . . G 6 130.494 144.034 120.228 1 24.76 ? C27 GZO 702 B 1 
HETATM 17 C C28 GZO . . . G 6 129.567 142.919 120.678 1 22.51 ? C28 GZO 702 B 1 
HETATM 18 C C29 GZO . . . G 6 135.864 142.424 130.266 1 27.47 ? C29 GZO 702 B 1 
HETATM 19 C C30 GZO . . . G 6 137.752 140.911 129.622 1 35.55 ? C30 GZO 702 B 1 
HETATM 20 C C31 GZO . . . G 6 139.732 139.88 128.973 1 29.36 ? C31 GZO 702 B 1 
HETATM 21 F F01 GZO . . . G 6 132.16 140.113 121.22 1 49.04 ? F01 GZO 702 B 1 
HETATM 22 N N04 GZO . . . G 6 134.698 142.709 121.526 1 33.39 ? N04 GZO 702 B 1 
HETATM 23 N N05 GZO . . . G 6 134.807 142.11 122.786 1 33.43 ? N05 GZO 702 B 1 
HETATM 24 N N06 GZO . . . G 6 135.545 144.963 120.488 1 23.54 ? N06 GZO 702 B 1 
HETATM 25 N N07 GZO . . . G 6 136.863 143.48 125.746 1 23.59 ? N07 GZO 702 B 1 
HETATM 26 N N08 GZO . . . G 6 135.148 141.587 125.736 1 22.18 ? N08 GZO 702 B 1 
HETATM 27 N N09 GZO . . . G 6 136.693 141.819 129.243 1 30.08 ? N09 GZO 702 B 1 
HETATM 28 N N10 GZO . . . G 6 138.145 144.017 127.83 1 30.5 ? N10 GZO 702 B 1 
HETATM 29 N N11 GZO . . . G 6 134.725 140.248 127.811 1 28.25 ? N11 GZO 702 B 1 
HETATM 30 O O02 GZO . . . G 6 138.398 140.133 128.663 1 33.45 ? O02 GZO 702 B 1 
HETATM 31 O O03 GZO . . . G 6 138.071 140.822 130.756 1 36.75 ? O03 GZO 702 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           346 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           31 
#