data_8HBK # _model_server_result.job_id -GohMpPXW8idF-0grPyu1Q _model_server_result.datetime_utc '2024-10-15 18:25:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hbk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 8HBK # _exptl.entry_id 8HBK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 531.878 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-[(6-chloranyl-2-methyl-indazol-5-yl)amino]-3-[(1-methyl-1,2,4-triazol-3-yl)methyl]-1-[[2,4,5-tris(fluoranyl)phenyl]methyl]-1,3,5-triazine-2,4-dione _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.13 _cell.angle_gamma 90 _cell.entry_id 8HBK _cell.length_a 97.093 _cell.length_b 82.528 _cell.length_c 51.526 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HBK _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -21.881728 0 46.648887 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H17 Cl F3 N9 O2' _chem_comp.formula_weight 531.878 _chem_comp.id 7YY _chem_comp.mon_nstd_flag . _chem_comp.name 6-[(6-chloranyl-2-methyl-indazol-5-yl)amino]-3-[(1-methyl-1,2,4-triazol-3-yl)methyl]-1-[[2,4,5-tris(fluoranyl)phenyl]methyl]-1,3,5-triazine-2,4-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 N17 7YY sing 1 n n N17 N19 7YY sing 2 n y N17 C16 7YY sing 3 n y N19 C20 7YY doub 4 n y C16 C15 7YY doub 5 n y C20 C15 7YY sing 6 n y C20 C21 7YY sing 7 n y C15 C14 7YY sing 8 n y C21 C22 7YY doub 9 n y C14 C13 7YY doub 10 n y C22 C13 7YY sing 11 n y C22 CL2 7YY sing 12 n n C13 N12 7YY sing 13 n n N12 C11 7YY sing 14 n n N10 C11 7YY doub 15 n n N10 C08 7YY sing 16 n n C11 N24 7YY sing 17 n n O09 C08 7YY doub 18 n n C08 N07 7YY sing 19 n n N24 C25 7YY sing 20 n n N24 C35 7YY sing 21 n n C25 C26 7YY sing 22 n n C26 C34 7YY doub 23 n y C26 C27 7YY sing 24 n y C34 C32 7YY sing 25 n y F28 C27 7YY sing 26 n n C27 C29 7YY doub 27 n y C32 F33 7YY sing 28 n n C32 C30 7YY doub 29 n y N07 C35 7YY sing 30 n n N07 C06 7YY sing 31 n n C35 O36 7YY doub 32 n n C29 C30 7YY sing 33 n y C30 F31 7YY sing 34 n n N37 C05 7YY doub 35 n y N37 N02 7YY sing 36 n y C06 C05 7YY sing 37 n n C01 N02 7YY sing 38 n n C05 N04 7YY sing 39 n y N02 C03 7YY sing 40 n y N04 C03 7YY doub 41 n y C14 H1 7YY sing 42 n n C01 H2 7YY sing 43 n n C01 H3 7YY sing 44 n n C01 H4 7YY sing 45 n n C03 H5 7YY sing 46 n n C06 H6 7YY sing 47 n n C06 H7 7YY sing 48 n n N12 H8 7YY sing 49 n n C16 H9 7YY sing 50 n n C18 H10 7YY sing 51 n n C18 H11 7YY sing 52 n n C18 H12 7YY sing 53 n n C21 H13 7YY sing 54 n n C25 H14 7YY sing 55 n n C25 H15 7YY sing 56 n n C29 H16 7YY sing 57 n n C34 H17 7YY sing 58 n n # _atom_sites.entry_id 8HBK _atom_sites.fract_transf_matrix[1][1] 0.010299 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004831 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012117 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021436 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 7YY A 1 401 401 7YY 7YY . C 3 HOH A 1 501 24 HOH HOH . C 3 HOH A 2 502 46 HOH HOH . C 3 HOH A 3 503 92 HOH HOH . C 3 HOH A 4 504 50 HOH HOH . C 3 HOH A 5 505 42 HOH HOH . C 3 HOH A 6 506 16 HOH HOH . C 3 HOH A 7 507 85 HOH HOH . C 3 HOH A 8 508 35 HOH HOH . C 3 HOH A 9 509 90 HOH HOH . C 3 HOH A 10 510 58 HOH HOH . C 3 HOH A 11 511 84 HOH HOH . C 3 HOH A 12 512 74 HOH HOH . C 3 HOH A 13 513 61 HOH HOH . C 3 HOH A 14 514 59 HOH HOH . C 3 HOH A 15 515 116 HOH HOH . C 3 HOH A 16 516 103 HOH HOH . C 3 HOH A 17 517 67 HOH HOH . C 3 HOH A 18 518 27 HOH HOH . C 3 HOH A 19 519 49 HOH HOH . C 3 HOH A 20 520 2 HOH HOH . C 3 HOH A 21 521 26 HOH HOH . C 3 HOH A 22 522 106 HOH HOH . C 3 HOH A 23 523 68 HOH HOH . C 3 HOH A 24 524 117 HOH HOH . C 3 HOH A 25 525 23 HOH HOH . C 3 HOH A 26 526 7 HOH HOH . C 3 HOH A 27 527 1 HOH HOH . C 3 HOH A 28 528 52 HOH HOH . C 3 HOH A 29 529 45 HOH HOH . C 3 HOH A 30 530 10 HOH HOH . C 3 HOH A 31 531 19 HOH HOH . C 3 HOH A 32 532 60 HOH HOH . C 3 HOH A 33 533 89 HOH HOH . C 3 HOH A 34 534 66 HOH HOH . C 3 HOH A 35 535 40 HOH HOH . C 3 HOH A 36 536 110 HOH HOH . C 3 HOH A 37 537 38 HOH HOH . C 3 HOH A 38 538 121 HOH HOH . C 3 HOH A 39 539 81 HOH HOH . C 3 HOH A 40 540 69 HOH HOH . C 3 HOH A 41 541 21 HOH HOH . C 3 HOH A 42 542 53 HOH HOH . C 3 HOH A 43 543 9 HOH HOH . C 3 HOH A 44 544 33 HOH HOH . C 3 HOH A 45 545 113 HOH HOH . C 3 HOH A 46 546 18 HOH HOH . C 3 HOH A 47 547 72 HOH HOH . C 3 HOH A 48 548 63 HOH HOH . C 3 HOH A 49 549 101 HOH HOH . C 3 HOH A 50 550 124 HOH HOH . C 3 HOH A 51 551 36 HOH HOH . C 3 HOH A 52 552 5 HOH HOH . C 3 HOH A 53 553 91 HOH HOH . C 3 HOH A 54 554 107 HOH HOH . C 3 HOH A 55 555 31 HOH HOH . C 3 HOH A 56 556 25 HOH HOH . C 3 HOH A 57 557 56 HOH HOH . C 3 HOH A 58 558 57 HOH HOH . C 3 HOH A 59 559 80 HOH HOH . C 3 HOH A 60 560 20 HOH HOH . C 3 HOH A 61 561 83 HOH HOH . C 3 HOH A 62 562 108 HOH HOH . C 3 HOH A 63 563 102 HOH HOH . C 3 HOH A 64 564 48 HOH HOH . C 3 HOH A 65 565 8 HOH HOH . C 3 HOH A 66 566 15 HOH HOH . C 3 HOH A 67 567 4 HOH HOH . C 3 HOH A 68 568 71 HOH HOH . C 3 HOH A 69 569 62 HOH HOH . C 3 HOH A 70 570 13 HOH HOH . C 3 HOH A 71 571 11 HOH HOH . C 3 HOH A 72 572 22 HOH HOH . C 3 HOH A 73 573 112 HOH HOH . C 3 HOH A 74 574 39 HOH HOH . C 3 HOH A 75 575 75 HOH HOH . C 3 HOH A 76 576 96 HOH HOH . C 3 HOH A 77 577 94 HOH HOH . C 3 HOH A 78 578 73 HOH HOH . C 3 HOH A 79 579 30 HOH HOH . C 3 HOH A 80 580 55 HOH HOH . C 3 HOH A 81 581 43 HOH HOH . C 3 HOH A 82 582 77 HOH HOH . C 3 HOH A 83 583 111 HOH HOH . C 3 HOH A 84 584 51 HOH HOH . C 3 HOH A 85 585 76 HOH HOH . C 3 HOH A 86 586 12 HOH HOH . C 3 HOH A 87 587 122 HOH HOH . C 3 HOH A 88 588 29 HOH HOH . C 3 HOH A 89 589 88 HOH HOH . C 3 HOH A 90 590 86 HOH HOH . C 3 HOH A 91 591 99 HOH HOH . C 3 HOH A 92 592 104 HOH HOH . C 3 HOH A 93 593 70 HOH HOH . C 3 HOH A 94 594 79 HOH HOH . C 3 HOH A 95 595 82 HOH HOH . C 3 HOH A 96 596 64 HOH HOH . C 3 HOH A 97 597 44 HOH HOH . C 3 HOH A 98 598 120 HOH HOH . C 3 HOH A 99 599 32 HOH HOH . C 3 HOH A 100 600 105 HOH HOH . C 3 HOH A 101 601 78 HOH HOH . C 3 HOH A 102 602 109 HOH HOH . C 3 HOH A 103 603 118 HOH HOH . C 3 HOH A 104 604 114 HOH HOH . C 3 HOH A 105 605 95 HOH HOH . C 3 HOH A 106 606 93 HOH HOH . C 3 HOH A 107 607 54 HOH HOH . C 3 HOH A 108 608 98 HOH HOH . C 3 HOH A 109 609 97 HOH HOH . C 3 HOH A 110 610 126 HOH HOH . C 3 HOH A 111 611 65 HOH HOH . C 3 HOH A 112 612 115 HOH HOH . C 3 HOH A 113 613 119 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 7YY . . . B 2 -22.167 -11.295 2.576 1 32.88 ? C11 7YY 401 A 1 HETATM 2 C C13 7YY . . . B 2 -23.657 -9.562 1.75 1 39.41 ? C13 7YY 401 A 1 HETATM 3 C C14 7YY . . . B 2 -25.027 -9.466 1.755 1 43.04 ? C14 7YY 401 A 1 HETATM 4 C C15 7YY . . . B 2 -25.602 -8.205 1.998 1 39.79 ? C15 7YY 401 A 1 HETATM 5 C C01 7YY . . . B 2 -22.835 -16.305 7.385 1 37.88 ? C01 7YY 401 A 1 HETATM 6 N N02 7YY . . . B 2 -21.656 -15.456 7.168 1 38.77 ? N02 7YY 401 A 1 HETATM 7 C C03 7YY . . . B 2 -20.472 -15.668 7.73 1 36.21 ? C03 7YY 401 A 1 HETATM 8 N N04 7YY . . . B 2 -19.628 -14.731 7.307 1 33.95 ? N04 7YY 401 A 1 HETATM 9 C C05 7YY . . . B 2 -20.328 -13.954 6.45 1 37.3 ? C05 7YY 401 A 1 HETATM 10 C C06 7YY . . . B 2 -19.761 -12.758 5.764 1 32.58 ? C06 7YY 401 A 1 HETATM 11 N N07 7YY . . . B 2 -20.591 -12.315 4.645 1 34.51 ? N07 7YY 401 A 1 HETATM 12 C C08 7YY . . . B 2 -21.375 -11.126 4.886 1 33.04 ? C08 7YY 401 A 1 HETATM 13 O O09 7YY . . . B 2 -21.344 -10.576 5.934 1 39.78 ? O09 7YY 401 A 1 HETATM 14 N N10 7YY . . . B 2 -22.159 -10.585 3.814 1 35.29 ? N10 7YY 401 A 1 HETATM 15 N N12 7YY . . . B 2 -22.944 -10.786 1.496 1 31.41 ? N12 7YY 401 A 1 HETATM 16 C C16 7YY . . . B 2 -26.941 -7.852 2.064 1 43.08 ? C16 7YY 401 A 1 HETATM 17 N N17 7YY . . . B 2 -26.998 -6.546 2.299 1 43.69 ? N17 7YY 401 A 1 HETATM 18 C C18 7YY . . . B 2 -28.065 -5.592 2.503 1 50.04 ? C18 7YY 401 A 1 HETATM 19 N N19 7YY . . . B 2 -25.69 -6.042 2.379 1 45.11 ? N19 7YY 401 A 1 HETATM 20 C C20 7YY . . . B 2 -24.829 -7.086 2.199 1 46.36 ? C20 7YY 401 A 1 HETATM 21 C C21 7YY . . . B 2 -23.404 -7.194 2.174 1 40.32 ? C21 7YY 401 A 1 HETATM 22 C C22 7YY . . . B 2 -22.852 -8.466 1.95 1 36.69 ? C22 7YY 401 A 1 HETATM 23 CL CL2 7YY . . . B 2 -21.076 -8.242 1.975 1 36.83 ? CL2 7YY 401 A 1 HETATM 24 N N24 7YY . . . B 2 -21.421 -12.481 2.335 1 38.52 ? N24 7YY 401 A 1 HETATM 25 C C25 7YY . . . B 2 -21.489 -13.093 1.026 1 34.23 ? C25 7YY 401 A 1 HETATM 26 C C26 7YY . . . B 2 -20.249 -12.617 0.244 1 36.17 ? C26 7YY 401 A 1 HETATM 27 C C27 7YY . . . B 2 -19.936 -13.299 -0.9 1 38.52 ? C27 7YY 401 A 1 HETATM 28 F F28 7YY . . . B 2 -20.758 -14.311 -1.249 1 39.64 ? F28 7YY 401 A 1 HETATM 29 C C29 7YY . . . B 2 -18.85 -12.989 -1.695 1 40.46 ? C29 7YY 401 A 1 HETATM 30 C C30 7YY . . . B 2 -18.056 -11.934 -1.319 1 42.64 ? C30 7YY 401 A 1 HETATM 31 F F31 7YY . . . B 2 -16.96 -11.553 -2.056 1 46.03 ? F31 7YY 401 A 1 HETATM 32 C C32 7YY . . . B 2 -18.342 -11.246 -0.15 1 39.19 ? C32 7YY 401 A 1 HETATM 33 F F33 7YY . . . B 2 -17.527 -10.23 0.121 1 33.52 ? F33 7YY 401 A 1 HETATM 34 C C34 7YY . . . B 2 -19.441 -11.555 0.65 1 40.67 ? C34 7YY 401 A 1 HETATM 35 C C35 7YY . . . B 2 -20.605 -13.03 3.414 1 34.71 ? C35 7YY 401 A 1 HETATM 36 O O36 7YY . . . B 2 -19.987 -14.03 3.252 1 34.09 ? O36 7YY 401 A 1 HETATM 37 N N37 7YY . . . B 2 -21.555 -14.358 6.366 1 33.72 ? N37 7YY 401 A 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 37 #