data_8HDG
#
_model_server_result.job_id            pAEV3z8Yow8mX2JiVsTKZw 
_model_server_result.datetime_utc      '2025-01-10 15:46:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8hdg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":203}' 
#
_entry.id    8HDG 
#
_exptl.entry_id    8HDG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              264.315 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.053 
_cell.angle_gamma         90 
_cell.entry_id            8HDG 
_cell.length_a            47.844 
_cell.length_b            47.879 
_cell.length_c            92.233 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8HDG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,M 1 1 
B,G,H,N 2 1 
C,I,O 3 1 
D,J,K,L,P 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 K N N 
? 3 L N N 
#
_chem_comp.formula           'C12 H24 O6' 
_chem_comp.formula_weight    264.315 
_chem_comp.id                O4B 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA OAM O4B sing 311 n n 
CAA CAB O4B sing 312 n n 
OAM CAC O4B sing 313 n n 
CAC CAD O4B sing 314 n n 
CAD OAO O4B sing 315 n n 
OAO CAG O4B sing 316 n n 
CAG CAH O4B sing 317 n n 
CAH OAQ O4B sing 318 n n 
OAQ CAK O4B sing 319 n n 
CAK CAL O4B sing 320 n n 
CAL OAR O4B sing 321 n n 
OAR CAJ O4B sing 322 n n 
CAJ CAI O4B sing 323 n n 
CAI OAP O4B sing 324 n n 
OAP CAF O4B sing 325 n n 
CAF CAE O4B sing 326 n n 
CAE OAN O4B sing 327 n n 
OAN CAB O4B sing 328 n n 
CAA HAA1 O4B sing 329 n n 
CAA HAA2 O4B sing 330 n n 
CAB HAB1 O4B sing 331 n n 
CAB HAB2 O4B sing 332 n n 
CAC HAC1 O4B sing 333 n n 
CAC HAC2 O4B sing 334 n n 
CAD HAD1 O4B sing 335 n n 
CAD HAD2 O4B sing 336 n n 
CAG HAG1 O4B sing 337 n n 
CAG HAG2 O4B sing 338 n n 
CAH HAH1 O4B sing 339 n n 
CAH HAH2 O4B sing 340 n n 
CAK HAK1 O4B sing 341 n n 
CAK HAK2 O4B sing 342 n n 
CAL HAL1 O4B sing 343 n n 
CAL HAL2 O4B sing 344 n n 
CAJ HAJ1 O4B sing 345 n n 
CAJ HAJ2 O4B sing 346 n n 
CAI HAI1 O4B sing 347 n n 
CAI HAI2 O4B sing 348 n n 
CAF HAF1 O4B sing 349 n n 
CAF HAF2 O4B sing 350 n n 
CAE HAE1 O4B sing 351 n n 
CAE HAE2 O4B sing 352 n n 
#
_atom_sites.entry_id                     8HDG 
_atom_sites.fract_transf_matrix[1][1]    0.020901 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000019 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020886 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010842 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NUT D 1 201 1 NUT NUT . 
F 3 O4B D 1 202 8 O4B O4B . 
G 2 NUT A 1 201 3 NUT NUT . 
H 3 O4B A 1 202 7 O4B O4B . 
I 2 NUT C 1 201 4 NUT NUT . 
J 2 NUT B 1 201 2 NUT NUT . 
K 3 O4B B 1 202 5 O4B O4B . 
L 3 O4B B 1 203 6 O4B O4B . 
M 4 HOH D 1 301 36 HOH HOH . 
M 4 HOH D 2 302 54 HOH HOH . 
M 4 HOH D 3 303 24 HOH HOH . 
M 4 HOH D 4 304 57 HOH HOH . 
M 4 HOH D 5 305 65 HOH HOH . 
M 4 HOH D 6 306 77 HOH HOH . 
M 4 HOH D 7 307 80 HOH HOH . 
M 4 HOH D 8 308 83 HOH HOH . 
M 4 HOH D 9 309 81 HOH HOH . 
M 4 HOH D 10 310 6 HOH HOH . 
M 4 HOH D 11 311 90 HOH HOH . 
M 4 HOH D 12 312 74 HOH HOH . 
M 4 HOH D 13 313 43 HOH HOH . 
M 4 HOH D 14 314 19 HOH HOH . 
M 4 HOH D 15 315 37 HOH HOH . 
M 4 HOH D 16 316 23 HOH HOH . 
M 4 HOH D 17 317 14 HOH HOH . 
M 4 HOH D 18 318 48 HOH HOH . 
M 4 HOH D 19 319 22 HOH HOH . 
M 4 HOH D 20 320 92 HOH HOH . 
M 4 HOH D 21 321 95 HOH HOH . 
M 4 HOH D 22 322 103 HOH HOH . 
M 4 HOH D 23 323 99 HOH HOH . 
M 4 HOH D 24 324 110 HOH HOH . 
M 4 HOH D 25 325 63 HOH HOH . 
M 4 HOH D 26 326 31 HOH HOH . 
N 4 HOH A 1 301 56 HOH HOH . 
N 4 HOH A 2 302 93 HOH HOH . 
N 4 HOH A 3 303 7 HOH HOH . 
N 4 HOH A 4 304 97 HOH HOH . 
N 4 HOH A 5 305 67 HOH HOH . 
N 4 HOH A 6 306 98 HOH HOH . 
N 4 HOH A 7 307 40 HOH HOH . 
N 4 HOH A 8 308 38 HOH HOH . 
N 4 HOH A 9 309 59 HOH HOH . 
N 4 HOH A 10 310 75 HOH HOH . 
N 4 HOH A 11 311 79 HOH HOH . 
N 4 HOH A 12 312 3 HOH HOH . 
N 4 HOH A 13 313 25 HOH HOH . 
N 4 HOH A 14 314 107 HOH HOH . 
N 4 HOH A 15 315 10 HOH HOH . 
N 4 HOH A 16 316 2 HOH HOH . 
N 4 HOH A 17 317 88 HOH HOH . 
N 4 HOH A 18 318 35 HOH HOH . 
N 4 HOH A 19 319 72 HOH HOH . 
N 4 HOH A 20 320 51 HOH HOH . 
N 4 HOH A 21 321 20 HOH HOH . 
N 4 HOH A 22 322 89 HOH HOH . 
N 4 HOH A 23 323 87 HOH HOH . 
N 4 HOH A 24 324 27 HOH HOH . 
N 4 HOH A 25 325 49 HOH HOH . 
N 4 HOH A 26 326 84 HOH HOH . 
N 4 HOH A 27 327 111 HOH HOH . 
N 4 HOH A 28 328 58 HOH HOH . 
N 4 HOH A 29 329 17 HOH HOH . 
O 4 HOH C 1 301 96 HOH HOH . 
O 4 HOH C 2 302 42 HOH HOH . 
O 4 HOH C 3 303 73 HOH HOH . 
O 4 HOH C 4 304 61 HOH HOH . 
O 4 HOH C 5 305 47 HOH HOH . 
O 4 HOH C 6 306 66 HOH HOH . 
O 4 HOH C 7 307 53 HOH HOH . 
O 4 HOH C 8 308 50 HOH HOH . 
O 4 HOH C 9 309 82 HOH HOH . 
O 4 HOH C 10 310 29 HOH HOH . 
O 4 HOH C 11 311 85 HOH HOH . 
O 4 HOH C 12 312 94 HOH HOH . 
O 4 HOH C 13 313 8 HOH HOH . 
O 4 HOH C 14 314 12 HOH HOH . 
O 4 HOH C 15 315 15 HOH HOH . 
O 4 HOH C 16 316 18 HOH HOH . 
O 4 HOH C 17 317 33 HOH HOH . 
O 4 HOH C 18 318 101 HOH HOH . 
O 4 HOH C 19 319 32 HOH HOH . 
O 4 HOH C 20 320 104 HOH HOH . 
O 4 HOH C 21 321 16 HOH HOH . 
O 4 HOH C 22 322 1 HOH HOH . 
O 4 HOH C 23 323 5 HOH HOH . 
O 4 HOH C 24 324 105 HOH HOH . 
O 4 HOH C 25 325 69 HOH HOH . 
O 4 HOH C 26 326 13 HOH HOH . 
P 4 HOH B 1 301 46 HOH HOH . 
P 4 HOH B 2 302 68 HOH HOH . 
P 4 HOH B 3 303 60 HOH HOH . 
P 4 HOH B 4 304 44 HOH HOH . 
P 4 HOH B 5 305 100 HOH HOH . 
P 4 HOH B 6 306 30 HOH HOH . 
P 4 HOH B 7 307 26 HOH HOH . 
P 4 HOH B 8 308 86 HOH HOH . 
P 4 HOH B 9 309 70 HOH HOH . 
P 4 HOH B 10 310 45 HOH HOH . 
P 4 HOH B 11 311 78 HOH HOH . 
P 4 HOH B 12 312 9 HOH HOH . 
P 4 HOH B 13 313 55 HOH HOH . 
P 4 HOH B 14 314 28 HOH HOH . 
P 4 HOH B 15 315 21 HOH HOH . 
P 4 HOH B 16 316 64 HOH HOH . 
P 4 HOH B 17 317 4 HOH HOH . 
P 4 HOH B 18 318 91 HOH HOH . 
P 4 HOH B 19 319 102 HOH HOH . 
P 4 HOH B 20 320 71 HOH HOH . 
P 4 HOH B 21 321 62 HOH HOH . 
P 4 HOH B 22 322 11 HOH HOH . 
P 4 HOH B 23 323 108 HOH HOH . 
P 4 HOH B 24 324 41 HOH HOH . 
P 4 HOH B 25 325 34 HOH HOH . 
P 4 HOH B 26 326 52 HOH HOH . 
P 4 HOH B 27 327 109 HOH HOH . 
P 4 HOH B 28 328 76 HOH HOH . 
P 4 HOH B 29 329 106 HOH HOH . 
P 4 HOH B 30 330 39 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA O4B . . . L 3 33.47 -26.415 -22.549 1 35.68 0 CAA O4B 203 B 1 
HETATM 2 O OAM O4B . . . L 3 33.932 -26.297 -23.88 1 35.85 0 OAM O4B 203 B 1 
HETATM 3 C CAC O4B . . . L 3 33.125 -25.522 -24.718 1 26.21 0 CAC O4B 203 B 1 
HETATM 4 C CAD O4B . . . L 3 33.828 -25.361 -26.042 1 27.67 0 CAD O4B 203 B 1 
HETATM 5 O OAO O4B . . . L 3 33.037 -24.558 -26.911 1 27.28 0 OAO O4B 203 B 1 
HETATM 6 C CAG O4B . . . L 3 33.232 -23.162 -26.882 1 33.02 0 CAG O4B 203 B 1 
HETATM 7 C CAH O4B . . . L 3 32.077 -22.467 -27.488 1 29.09 0 CAH O4B 203 B 1 
HETATM 8 O OAQ O4B . . . L 3 31.209 -22.096 -26.412 1 33.61 0 OAQ O4B 203 B 1 
HETATM 9 C CAK O4B . . . L 3 30.584 -20.831 -26.536 1 33.25 0 CAK O4B 203 B 1 
HETATM 10 C CAL O4B . . . L 3 29.708 -20.631 -25.343 1 35.29 0 CAL O4B 203 B 1 
HETATM 11 O OAR O4B . . . L 3 30.517 -20.191 -24.259 1 39.71 0 OAR O4B 203 B 1 
HETATM 12 C CAJ O4B . . . L 3 30.186 -20.767 -23.02 1 34.89 0 CAJ O4B 203 B 1 
HETATM 13 C CAI O4B . . . L 3 31.286 -20.593 -22.063 1 28.83 0 CAI O4B 203 B 1 
HETATM 14 O OAP O4B . . . L 3 32.032 -21.803 -22.014 1 28.44 0 OAP O4B 203 B 1 
HETATM 15 C CAF O4B . . . L 3 32.058 -22.46 -20.772 1 31.26 0 CAF O4B 203 B 1 
HETATM 16 C CAE O4B . . . L 3 33.235 -23.33 -20.774 1 32.86 0 CAE O4B 203 B 1 
HETATM 17 O OAN O4B . . . L 3 33.158 -24.198 -21.896 1 31.67 0 OAN O4B 203 B 1 
HETATM 18 C CAB O4B . . . L 3 34.025 -25.311 -21.771 1 34.72 0 CAB O4B 203 B 1 
HETATM 19 H HAA1 O4B . . . L 3 32.489 -26.381 -22.529 1 35.44 0 HAA1 O4B 203 B 1 
HETATM 20 H HAA2 O4B . . . L 3 33.76 -27.272 -22.168 1 35.48 0 HAA2 O4B 203 B 1 
HETATM 21 H HAB1 O4B . . . L 3 34.918 -25.079 -22.107 1 34.2 0 HAB1 O4B 203 B 1 
HETATM 22 H HAB2 O4B . . . L 3 34.106 -25.576 -20.831 1 34.19 0 HAB2 O4B 203 B 1 
HETATM 23 H HAC1 O4B . . . L 3 32.989 -24.65 -24.313 1 28.62 0 HAC1 O4B 203 B 1 
HETATM 24 H HAC2 O4B . . . L 3 32.257 -25.958 -24.844 1 28.61 0 HAC2 O4B 203 B 1 
HETATM 25 H HAD1 O4B . . . L 3 33.974 -26.243 -26.449 1 27.23 0 HAD1 O4B 203 B 1 
HETATM 26 H HAD2 O4B . . . L 3 34.703 -24.938 -25.904 1 27.24 0 HAD2 O4B 203 B 1 
HETATM 27 H HAG1 O4B . . . L 3 34.047 -22.937 -27.381 1 30.64 0 HAG1 O4B 203 B 1 
HETATM 28 H HAG2 O4B . . . L 3 33.352 -22.862 -25.955 1 30.64 0 HAG2 O4B 203 B 1 
HETATM 29 H HAH1 O4B . . . L 3 31.609 -23.063 -28.113 1 31 0 HAH1 O4B 203 B 1 
HETATM 30 H HAH2 O4B . . . L 3 32.378 -21.669 -27.976 1 31.02 0 HAH2 O4B 203 B 1 
HETATM 31 H HAK1 O4B . . . L 3 30.047 -20.799 -27.358 1 33.81 0 HAK1 O4B 203 B 1 
HETATM 32 H HAK2 O4B . . . L 3 31.263 -20.122 -26.578 1 33.81 0 HAK2 O4B 203 B 1 
HETATM 33 H HAL1 O4B . . . L 3 29.258 -21.474 -25.114 1 35.77 0 HAL1 O4B 203 B 1 
HETATM 34 H HAL2 O4B . . . L 3 29.023 -19.959 -25.542 1 35.76 0 HAL2 O4B 203 B 1 
HETATM 35 H HAJ1 O4B . . . L 3 29.992 -21.718 -23.13 1 34.32 0 HAJ1 O4B 203 B 1 
HETATM 36 H HAJ2 O4B . . . L 3 29.379 -20.333 -22.668 1 34.33 0 HAJ2 O4B 203 B 1 
HETATM 37 H HAI1 O4B . . . L 3 30.925 -20.382 -21.175 1 30.04 0 HAI1 O4B 203 B 1 
HETATM 38 H HAI2 O4B . . . L 3 31.866 -19.854 -22.347 1 30.07 0 HAI2 O4B 203 B 1 
HETATM 39 H HAF1 O4B . . . L 3 31.241 -22.993 -20.651 1 30.93 0 HAF1 O4B 203 B 1 
HETATM 40 H HAF2 O4B . . . L 3 32.121 -21.808 -20.04 1 30.93 0 HAF2 O4B 203 B 1 
HETATM 41 H HAE1 O4B . . . L 3 33.261 -23.852 -19.944 1 32.22 0 HAE1 O4B 203 B 1 
HETATM 42 H HAE2 O4B . . . L 3 34.052 -22.788 -20.827 1 32.2 0 HAE2 O4B 203 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    27 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           42 
#