data_8HEJ # _model_server_result.job_id I97U9jXkqCUbbQFIAyvm5A _model_server_result.datetime_utc '2024-10-16 23:39:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hej # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 8HEJ # _exptl.entry_id 8HEJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 160.093 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,4,6-trifluorobenzaldehyde _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8HEJ _cell.length_a 84.945 _cell.length_b 42.685 _cell.length_c 64.272 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HEJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 5 A LYS 15 1_555 D C33 XHB . A XHB 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale2 B NZ LYS 5 B LYS 15 1_555 F C33 XHB . B XHB 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? # _chem_comp.formula 'C7 H3 F3 O' _chem_comp.formula_weight 160.093 _chem_comp.id XHB _chem_comp.mon_nstd_flag . _chem_comp.name 2,4,6-trifluorobenzaldehyde _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O34 C33 XHB doub 344 n n C33 C28 XHB sing 345 n n F31 C29 XHB sing 346 n n C29 C28 XHB doub 347 n y C29 C30 XHB sing 348 n y C28 C27 XHB sing 349 n y C30 C25 XHB doub 350 n y C27 F32 XHB sing 351 n n C27 C26 XHB doub 352 n y C25 C26 XHB sing 353 n y C25 F24 XHB sing 354 n n C26 H1 XHB sing 355 n n C30 H2 XHB sing 356 n n C33 H3 XHB sing 357 n n # _atom_sites.entry_id 8HEJ _atom_sites.fract_transf_matrix[1][1] 0.011772 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023427 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015559 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 XHF A 1 201 1 XHF LIG . D 3 XHB A 1 202 201 XHB BEN . E 2 XHF B 1 201 1 XHF LIG . F 3 XHB B 1 202 201 XHB BEN . G 4 HOH A 1 301 27 HOH HOH . G 4 HOH A 2 302 136 HOH HOH . G 4 HOH A 3 303 52 HOH HOH . G 4 HOH A 4 304 125 HOH HOH . G 4 HOH A 5 305 170 HOH HOH . G 4 HOH A 6 306 121 HOH HOH . G 4 HOH A 7 307 22 HOH HOH . G 4 HOH A 8 308 44 HOH HOH . G 4 HOH A 9 309 18 HOH HOH . G 4 HOH A 10 310 72 HOH HOH . G 4 HOH A 11 311 154 HOH HOH . G 4 HOH A 12 312 26 HOH HOH . G 4 HOH A 13 313 66 HOH HOH . G 4 HOH A 14 314 70 HOH HOH . G 4 HOH A 15 315 58 HOH HOH . G 4 HOH A 16 316 64 HOH HOH . G 4 HOH A 17 317 20 HOH HOH . G 4 HOH A 18 318 73 HOH HOH . G 4 HOH A 19 319 68 HOH HOH . G 4 HOH A 20 320 9 HOH HOH . G 4 HOH A 21 321 89 HOH HOH . G 4 HOH A 22 322 57 HOH HOH . G 4 HOH A 23 323 81 HOH HOH . G 4 HOH A 24 324 167 HOH HOH . G 4 HOH A 25 325 12 HOH HOH . G 4 HOH A 26 326 168 HOH HOH . G 4 HOH A 27 327 11 HOH HOH . G 4 HOH A 28 328 49 HOH HOH . G 4 HOH A 29 329 32 HOH HOH . G 4 HOH A 30 330 25 HOH HOH . G 4 HOH A 31 331 16 HOH HOH . G 4 HOH A 32 332 2 HOH HOH . G 4 HOH A 33 333 1 HOH HOH . G 4 HOH A 34 334 38 HOH HOH . G 4 HOH A 35 335 119 HOH HOH . G 4 HOH A 36 336 30 HOH HOH . G 4 HOH A 37 337 93 HOH HOH . G 4 HOH A 38 338 36 HOH HOH . G 4 HOH A 39 339 4 HOH HOH . G 4 HOH A 40 340 35 HOH HOH . G 4 HOH A 41 341 24 HOH HOH . G 4 HOH A 42 342 61 HOH HOH . G 4 HOH A 43 343 62 HOH HOH . G 4 HOH A 44 344 76 HOH HOH . G 4 HOH A 45 345 17 HOH HOH . G 4 HOH A 46 346 138 HOH HOH . G 4 HOH A 47 347 40 HOH HOH . G 4 HOH A 48 348 104 HOH HOH . G 4 HOH A 49 349 94 HOH HOH . G 4 HOH A 50 350 39 HOH HOH . G 4 HOH A 51 351 111 HOH HOH . G 4 HOH A 52 352 156 HOH HOH . G 4 HOH A 53 353 123 HOH HOH . G 4 HOH A 54 354 120 HOH HOH . G 4 HOH A 55 355 145 HOH HOH . G 4 HOH A 56 356 56 HOH HOH . G 4 HOH A 57 357 134 HOH HOH . G 4 HOH A 58 358 161 HOH HOH . G 4 HOH A 59 359 10 HOH HOH . G 4 HOH A 60 360 105 HOH HOH . G 4 HOH A 61 361 43 HOH HOH . G 4 HOH A 62 362 173 HOH HOH . G 4 HOH A 63 363 82 HOH HOH . G 4 HOH A 64 364 103 HOH HOH . G 4 HOH A 65 365 91 HOH HOH . G 4 HOH A 66 366 54 HOH HOH . G 4 HOH A 67 367 95 HOH HOH . G 4 HOH A 68 368 46 HOH HOH . G 4 HOH A 69 369 80 HOH HOH . G 4 HOH A 70 370 102 HOH HOH . G 4 HOH A 71 371 124 HOH HOH . G 4 HOH A 72 372 152 HOH HOH . G 4 HOH A 73 373 79 HOH HOH . G 4 HOH A 74 374 175 HOH HOH . G 4 HOH A 75 375 171 HOH HOH . G 4 HOH A 76 376 114 HOH HOH . G 4 HOH A 77 377 41 HOH HOH . G 4 HOH A 78 378 47 HOH HOH . G 4 HOH A 79 379 153 HOH HOH . G 4 HOH A 80 380 172 HOH HOH . G 4 HOH A 81 381 113 HOH HOH . G 4 HOH A 82 382 77 HOH HOH . G 4 HOH A 83 383 139 HOH HOH . H 4 HOH B 1 301 34 HOH HOH . H 4 HOH B 2 302 166 HOH HOH . H 4 HOH B 3 303 127 HOH HOH . H 4 HOH B 4 304 75 HOH HOH . H 4 HOH B 5 305 131 HOH HOH . H 4 HOH B 6 306 65 HOH HOH . H 4 HOH B 7 307 101 HOH HOH . H 4 HOH B 8 308 19 HOH HOH . H 4 HOH B 9 309 60 HOH HOH . H 4 HOH B 10 310 86 HOH HOH . H 4 HOH B 11 311 6 HOH HOH . H 4 HOH B 12 312 90 HOH HOH . H 4 HOH B 13 313 157 HOH HOH . H 4 HOH B 14 314 13 HOH HOH . H 4 HOH B 15 315 31 HOH HOH . H 4 HOH B 16 316 78 HOH HOH . H 4 HOH B 17 317 140 HOH HOH . H 4 HOH B 18 318 87 HOH HOH . H 4 HOH B 19 319 8 HOH HOH . H 4 HOH B 20 320 45 HOH HOH . H 4 HOH B 21 321 109 HOH HOH . H 4 HOH B 22 322 42 HOH HOH . H 4 HOH B 23 323 116 HOH HOH . H 4 HOH B 24 324 48 HOH HOH . H 4 HOH B 25 325 7 HOH HOH . H 4 HOH B 26 326 67 HOH HOH . H 4 HOH B 27 327 53 HOH HOH . H 4 HOH B 28 328 126 HOH HOH . H 4 HOH B 29 329 148 HOH HOH . H 4 HOH B 30 330 5 HOH HOH . H 4 HOH B 31 331 29 HOH HOH . H 4 HOH B 32 332 37 HOH HOH . H 4 HOH B 33 333 106 HOH HOH . H 4 HOH B 34 334 23 HOH HOH . H 4 HOH B 35 335 3 HOH HOH . H 4 HOH B 36 336 50 HOH HOH . H 4 HOH B 37 337 74 HOH HOH . H 4 HOH B 38 338 99 HOH HOH . H 4 HOH B 39 339 21 HOH HOH . H 4 HOH B 40 340 28 HOH HOH . H 4 HOH B 41 341 88 HOH HOH . H 4 HOH B 42 342 98 HOH HOH . H 4 HOH B 43 343 71 HOH HOH . H 4 HOH B 44 344 33 HOH HOH . H 4 HOH B 45 345 14 HOH HOH . H 4 HOH B 46 346 132 HOH HOH . H 4 HOH B 47 347 118 HOH HOH . H 4 HOH B 48 348 130 HOH HOH . H 4 HOH B 49 349 96 HOH HOH . H 4 HOH B 50 350 63 HOH HOH . H 4 HOH B 51 351 146 HOH HOH . H 4 HOH B 52 352 129 HOH HOH . H 4 HOH B 53 353 85 HOH HOH . H 4 HOH B 54 354 51 HOH HOH . H 4 HOH B 55 355 100 HOH HOH . H 4 HOH B 56 356 135 HOH HOH . H 4 HOH B 57 357 144 HOH HOH . H 4 HOH B 58 358 160 HOH HOH . H 4 HOH B 59 359 159 HOH HOH . H 4 HOH B 60 360 92 HOH HOH . H 4 HOH B 61 361 55 HOH HOH . H 4 HOH B 62 362 150 HOH HOH . H 4 HOH B 63 363 112 HOH HOH . H 4 HOH B 64 364 69 HOH HOH . H 4 HOH B 65 365 133 HOH HOH . H 4 HOH B 66 366 165 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C26 XHB . . . D 3 -0.284 8 0.82 1 84.12 ? C26 XHB 202 A 1 HETATM 2 C C28 XHB . . . D 3 -0.367 5.611 0.976 1 71.22 ? C28 XHB 202 A 1 HETATM 3 C C25 XHB . . . D 3 -0.177 8.096 2.195 1 90.23 ? C25 XHB 202 A 1 HETATM 4 C C27 XHB . . . D 3 -0.379 6.762 0.211 1 84.25 ? C27 XHB 202 A 1 HETATM 5 C C29 XHB . . . D 3 -0.253 5.699 2.353 1 80.11 ? C29 XHB 202 A 1 HETATM 6 C C30 XHB . . . D 3 -0.158 6.943 2.964 1 85.46 ? C30 XHB 202 A 1 HETATM 7 C C33 XHB . . . D 3 -0.458 4.246 0.293 1 56.81 ? C33 XHB 202 A 1 HETATM 8 F F24 XHB . . . D 3 -0.089 9.324 2.786 1 100.35 ? F24 XHB 202 A 1 HETATM 9 F F31 XHB . . . D 3 -0.237 4.557 3.103 1 82.92 ? F31 XHB 202 A 1 HETATM 10 F F32 XHB . . . D 3 -0.484 6.675 -1.146 1 100.04 ? F32 XHB 202 A 1 HETATM 11 O O34 XHB . . . D 3 0.351 3.993 -0.541 1 57.54 ? O34 XHB 202 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #