data_8HFJ # _model_server_result.job_id MRZeKO6rTx1UZ6VlVqij9w _model_server_result.datetime_utc '2024-10-12 19:29:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hfj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":302}' # _entry.id 8HFJ # _exptl.entry_id 8HFJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 216.276 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-methyl-2-[(4-methylphenyl)methyl]cyclopentane-1,3-dione _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8HFJ _cell.length_a 124.92 _cell.length_b 124.92 _cell.length_c 133.778 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HFJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 J N N # _chem_comp.formula 'C14 H16 O2' _chem_comp.formula_weight 216.276 _chem_comp.id L7Z _chem_comp.mon_nstd_flag . _chem_comp.name 2-methyl-2-[(4-methylphenyl)methyl]cyclopentane-1,3-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C16 C09 L7Z sing 173 n n O14 C10 L7Z doub 174 n n C10 C09 L7Z sing 175 n n C10 C11 L7Z sing 176 n n C09 C08 L7Z sing 177 n n C09 C13 L7Z sing 178 n n C04 C03 L7Z doub 179 n y C04 C05 L7Z sing 180 n y C08 C05 L7Z sing 181 n n C03 C02 L7Z sing 182 n y C05 C06 L7Z doub 183 n y C13 O15 L7Z doub 184 n n C13 C12 L7Z sing 185 n n C11 C12 L7Z sing 186 n n C02 C07 L7Z sing 187 n n C02 C01 L7Z doub 188 n y C06 C01 L7Z sing 189 n y C01 H1 L7Z sing 190 n n C03 H2 L7Z sing 191 n n C04 H3 L7Z sing 192 n n C06 H4 L7Z sing 193 n n C07 H5 L7Z sing 194 n n C07 H6 L7Z sing 195 n n C07 H7 L7Z sing 196 n n C08 H8 L7Z sing 197 n n C08 H9 L7Z sing 198 n n C11 H10 L7Z sing 199 n n C11 H11 L7Z sing 200 n n C12 H12 L7Z sing 201 n n C12 H13 L7Z sing 202 n n C16 H14 L7Z sing 203 n n C16 H15 L7Z sing 204 n n C16 H16 L7Z sing 205 n n # _atom_sites.entry_id 8HFJ _atom_sites.fract_transf_matrix[1][1] 0.008005 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008005 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007475 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAP A 1 301 1 NAP NAP . F 2 NAP B 1 301 2 NAP NAP . G 2 NAP C 1 301 3 NAP NAP . H 3 L7Z C 1 302 1 L7Z LIG . I 2 NAP D 1 301 4 NAP NAP . J 3 L7Z D 1 302 2 L7Z LIG . K 4 HOH A 1 401 81 HOH HOH . K 4 HOH A 2 402 142 HOH HOH . K 4 HOH A 3 403 180 HOH HOH . K 4 HOH A 4 404 103 HOH HOH . K 4 HOH A 5 405 52 HOH HOH . K 4 HOH A 6 406 69 HOH HOH . K 4 HOH A 7 407 14 HOH HOH . K 4 HOH A 8 408 87 HOH HOH . K 4 HOH A 9 409 255 HOH HOH . K 4 HOH A 10 410 77 HOH HOH . K 4 HOH A 11 411 32 HOH HOH . K 4 HOH A 12 412 62 HOH HOH . K 4 HOH A 13 413 13 HOH HOH . K 4 HOH A 14 414 3 HOH HOH . K 4 HOH A 15 415 273 HOH HOH . K 4 HOH A 16 416 1 HOH HOH . K 4 HOH A 17 417 230 HOH HOH . K 4 HOH A 18 418 57 HOH HOH . K 4 HOH A 19 419 37 HOH HOH . K 4 HOH A 20 420 234 HOH HOH . K 4 HOH A 21 421 26 HOH HOH . K 4 HOH A 22 422 53 HOH HOH . K 4 HOH A 23 423 50 HOH HOH . K 4 HOH A 24 424 147 HOH HOH . K 4 HOH A 25 425 208 HOH HOH . L 4 HOH B 1 401 15 HOH HOH . L 4 HOH B 2 402 73 HOH HOH . L 4 HOH B 3 403 31 HOH HOH . L 4 HOH B 4 404 261 HOH HOH . L 4 HOH B 5 405 246 HOH HOH . L 4 HOH B 6 406 43 HOH HOH . L 4 HOH B 7 407 9 HOH HOH . L 4 HOH B 8 408 186 HOH HOH . L 4 HOH B 9 409 66 HOH HOH . L 4 HOH B 10 410 82 HOH HOH . L 4 HOH B 11 411 49 HOH HOH . L 4 HOH B 12 412 39 HOH HOH . L 4 HOH B 13 413 95 HOH HOH . L 4 HOH B 14 414 34 HOH HOH . L 4 HOH B 15 415 44 HOH HOH . L 4 HOH B 16 416 10 HOH HOH . L 4 HOH B 17 417 12 HOH HOH . L 4 HOH B 18 418 171 HOH HOH . L 4 HOH B 19 419 47 HOH HOH . L 4 HOH B 20 420 161 HOH HOH . L 4 HOH B 21 421 41 HOH HOH . L 4 HOH B 22 422 304 HOH HOH . L 4 HOH B 23 423 130 HOH HOH . L 4 HOH B 24 424 33 HOH HOH . L 4 HOH B 25 425 453 HOH HOH . M 4 HOH C 1 401 132 HOH HOH . M 4 HOH C 2 402 46 HOH HOH . M 4 HOH C 3 403 94 HOH HOH . M 4 HOH C 4 404 68 HOH HOH . M 4 HOH C 5 405 24 HOH HOH . M 4 HOH C 6 406 40 HOH HOH . M 4 HOH C 7 407 48 HOH HOH . M 4 HOH C 8 408 30 HOH HOH . M 4 HOH C 9 409 111 HOH HOH . M 4 HOH C 10 410 21 HOH HOH . M 4 HOH C 11 411 28 HOH HOH . M 4 HOH C 12 412 35 HOH HOH . M 4 HOH C 13 413 22 HOH HOH . M 4 HOH C 14 414 256 HOH HOH . M 4 HOH C 15 415 36 HOH HOH . M 4 HOH C 16 416 212 HOH HOH . M 4 HOH C 17 417 18 HOH HOH . M 4 HOH C 18 418 29 HOH HOH . M 4 HOH C 19 419 143 HOH HOH . M 4 HOH C 20 420 118 HOH HOH . M 4 HOH C 21 421 45 HOH HOH . M 4 HOH C 22 422 51 HOH HOH . M 4 HOH C 23 423 122 HOH HOH . M 4 HOH C 24 424 4 HOH HOH . M 4 HOH C 25 425 457 HOH HOH . M 4 HOH C 26 426 452 HOH HOH . N 4 HOH D 1 401 80 HOH HOH . N 4 HOH D 2 402 205 HOH HOH . N 4 HOH D 3 403 74 HOH HOH . N 4 HOH D 4 404 101 HOH HOH . N 4 HOH D 5 405 23 HOH HOH . N 4 HOH D 6 406 253 HOH HOH . N 4 HOH D 7 407 42 HOH HOH . N 4 HOH D 8 408 60 HOH HOH . N 4 HOH D 9 409 11 HOH HOH . N 4 HOH D 10 410 162 HOH HOH . N 4 HOH D 11 411 17 HOH HOH . N 4 HOH D 12 412 240 HOH HOH . N 4 HOH D 13 413 25 HOH HOH . N 4 HOH D 14 414 112 HOH HOH . N 4 HOH D 15 415 38 HOH HOH . N 4 HOH D 16 416 55 HOH HOH . N 4 HOH D 17 417 8 HOH HOH . N 4 HOH D 18 418 16 HOH HOH . N 4 HOH D 19 419 2 HOH HOH . N 4 HOH D 20 420 54 HOH HOH . N 4 HOH D 21 421 352 HOH HOH . N 4 HOH D 22 422 71 HOH HOH . N 4 HOH D 23 423 199 HOH HOH . N 4 HOH D 24 424 75 HOH HOH . N 4 HOH D 25 425 83 HOH HOH . N 4 HOH D 26 426 90 HOH HOH . N 4 HOH D 27 427 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 L7Z . . . H 3 -31.275 10.06 13.625 1 63 ? C10 L7Z 302 C 1 HETATM 2 C C13 L7Z . . . H 3 -32.805 11.583 14.849 1 61.27 ? C13 L7Z 302 C 1 HETATM 3 C C01 L7Z . . . H 3 -31.028 15.565 16.648 1 73.75 ? C01 L7Z 302 C 1 HETATM 4 C C02 L7Z . . . H 3 -31.834 16.45 15.717 1 71.23 ? C02 L7Z 302 C 1 HETATM 5 C C03 L7Z . . . H 3 -32.238 15.982 14.325 1 69.7 ? C03 L7Z 302 C 1 HETATM 6 C C04 L7Z . . . H 3 -31.813 14.603 13.872 1 70.14 ? C04 L7Z 302 C 1 HETATM 7 C C05 L7Z . . . H 3 -30.996 13.678 14.796 1 72.55 ? C05 L7Z 302 C 1 HETATM 8 C C06 L7Z . . . H 3 -30.598 14.161 16.185 1 71.19 ? C06 L7Z 302 C 1 HETATM 9 C C07 L7Z . . . H 3 -32.265 17.847 16.148 1 69.52 ? C07 L7Z 302 C 1 HETATM 10 C C08 L7Z . . . H 3 -30.532 12.263 14.323 1 71.15 ? C08 L7Z 302 C 1 HETATM 11 C C09 L7Z . . . H 3 -31.605 11.378 13.677 1 63.81 ? C09 L7Z 302 C 1 HETATM 12 C C11 L7Z . . . H 3 -31.755 9.528 15.072 1 59.67 ? C11 L7Z 302 C 1 HETATM 13 C C12 L7Z . . . H 3 -33.005 10.383 15.419 1 61.69 ? C12 L7Z 302 C 1 HETATM 14 O O14 L7Z . . . H 3 -30.753 9.382 12.771 1 58.31 ? O14 L7Z 302 C 1 HETATM 15 O O15 L7Z . . . H 3 -33.32 12.603 15.162 1 55.38 ? O15 L7Z 302 C 1 HETATM 16 C C16 L7Z . . . H 3 -31.953 11.89 12.231 1 60.46 ? C16 L7Z 302 C 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 16 #