data_8HFK
#
_model_server_result.job_id            Bos5Jruj1oE1jmJ4JyqMug 
_model_server_result.datetime_utc      '2024-10-12 19:21:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8hfk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":301}' 
#
_entry.id    8HFK 
#
_exptl.entry_id    8HFK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              743.405 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8HFK 
_cell.length_a            124.867 
_cell.length_b            124.867 
_cell.length_c            133.195 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8HFK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 I N N 
? 2 K N N 
#
_chem_comp.formula           'C21 H28 N7 O17 P3' 
_chem_comp.formula_weight    743.405 
_chem_comp.id                NAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAP doub 255 n n 
PA O2A NAP sing 256 n n 
PA O5B NAP sing 257 n n 
PA O3 NAP sing 258 n n 
O2A HOA2 NAP sing 259 n n 
O5B C5B NAP sing 260 n n 
C5B C4B NAP sing 261 n n 
C5B H51A NAP sing 262 n n 
C5B H52A NAP sing 263 n n 
C4B O4B NAP sing 264 n n 
C4B C3B NAP sing 265 n n 
C4B H4B NAP sing 266 n n 
O4B C1B NAP sing 267 n n 
C3B O3B NAP sing 268 n n 
C3B C2B NAP sing 269 n n 
C3B H3B NAP sing 270 n n 
O3B HO3A NAP sing 271 n n 
C2B O2B NAP sing 272 n n 
C2B C1B NAP sing 273 n n 
C2B H2B NAP sing 274 n n 
O2B P2B NAP sing 275 n n 
C1B N9A NAP sing 276 n n 
C1B H1B NAP sing 277 n n 
N9A C8A NAP sing 278 n y 
N9A C4A NAP sing 279 n y 
C8A N7A NAP doub 280 n y 
C8A H8A NAP sing 281 n n 
N7A C5A NAP sing 282 n y 
C5A C6A NAP sing 283 n y 
C5A C4A NAP doub 284 n y 
C6A N6A NAP sing 285 n n 
C6A N1A NAP doub 286 n y 
N6A H61A NAP sing 287 n n 
N6A H62A NAP sing 288 n n 
N1A C2A NAP sing 289 n y 
C2A N3A NAP doub 290 n y 
C2A H2A NAP sing 291 n n 
N3A C4A NAP sing 292 n y 
O3 PN NAP sing 293 n n 
PN O1N NAP doub 294 n n 
PN O2N NAP sing 295 n n 
PN O5D NAP sing 296 n n 
O5D C5D NAP sing 297 n n 
C5D C4D NAP sing 298 n n 
C5D H51N NAP sing 299 n n 
C5D H52N NAP sing 300 n n 
C4D O4D NAP sing 301 n n 
C4D C3D NAP sing 302 n n 
C4D H4D NAP sing 303 n n 
O4D C1D NAP sing 304 n n 
C3D O3D NAP sing 305 n n 
C3D C2D NAP sing 306 n n 
C3D H3D NAP sing 307 n n 
O3D HO3N NAP sing 308 n n 
C2D O2D NAP sing 309 n n 
C2D C1D NAP sing 310 n n 
C2D H2D NAP sing 311 n n 
O2D HO2N NAP sing 312 n n 
C1D N1N NAP sing 313 n n 
C1D H1D NAP sing 314 n n 
N1N C2N NAP sing 315 n y 
N1N C6N NAP doub 316 n y 
C2N C3N NAP doub 317 n y 
C2N H2N NAP sing 318 n n 
C3N C7N NAP sing 319 n n 
C3N C4N NAP sing 320 n y 
C7N O7N NAP doub 321 n n 
C7N N7N NAP sing 322 n n 
N7N H71N NAP sing 323 n n 
N7N H72N NAP sing 324 n n 
C4N C5N NAP doub 325 n y 
C4N H4N NAP sing 326 n n 
C5N C6N NAP sing 327 n y 
C5N H5N NAP sing 328 n n 
C6N H6N NAP sing 329 n n 
P2B O1X NAP doub 330 n n 
P2B O2X NAP sing 331 n n 
P2B O3X NAP sing 332 n n 
O2X HOP2 NAP sing 333 n n 
O3X HOP3 NAP sing 334 n n 
#
_atom_sites.entry_id                     8HFK 
_atom_sites.fract_transf_matrix[1][1]    0.008009 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008009 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007508 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NAP A 1 301 1 NAP NAP . 
F 3 L8U A 1 302 1 L8U LIG . 
G 2 NAP B 1 301 2 NAP NAP . 
H 3 L8U B 1 302 3 L8U LIG . 
I 2 NAP C 1 301 3 NAP NAP . 
J 3 L8U C 1 302 2 L8U LIG . 
K 2 NAP D 1 301 4 NAP NAP . 
L 3 L8U D 1 302 4 L8U LIG . 
M 4 HOH A 1 401 52 HOH HOH . 
M 4 HOH A 2 402 54 HOH HOH . 
M 4 HOH A 3 403 6 HOH HOH . 
M 4 HOH A 4 404 22 HOH HOH . 
M 4 HOH A 5 405 3 HOH HOH . 
M 4 HOH A 6 406 182 HOH HOH . 
M 4 HOH A 7 407 31 HOH HOH . 
M 4 HOH A 8 408 94 HOH HOH . 
M 4 HOH A 9 409 126 HOH HOH . 
M 4 HOH A 10 410 30 HOH HOH . 
M 4 HOH A 11 411 122 HOH HOH . 
M 4 HOH A 12 412 7 HOH HOH . 
N 4 HOH B 1 401 29 HOH HOH . 
N 4 HOH B 2 402 23 HOH HOH . 
N 4 HOH B 3 403 66 HOH HOH . 
N 4 HOH B 4 404 10 HOH HOH . 
N 4 HOH B 5 405 24 HOH HOH . 
N 4 HOH B 6 406 32 HOH HOH . 
N 4 HOH B 7 407 116 HOH HOH . 
N 4 HOH B 8 408 5 HOH HOH . 
N 4 HOH B 9 409 44 HOH HOH . 
N 4 HOH B 10 410 4 HOH HOH . 
O 4 HOH C 1 401 34 HOH HOH . 
O 4 HOH C 2 402 38 HOH HOH . 
O 4 HOH C 3 403 27 HOH HOH . 
O 4 HOH C 4 404 57 HOH HOH . 
O 4 HOH C 5 405 40 HOH HOH . 
O 4 HOH C 6 406 21 HOH HOH . 
O 4 HOH C 7 407 43 HOH HOH . 
O 4 HOH C 8 408 117 HOH HOH . 
O 4 HOH C 9 409 113 HOH HOH . 
O 4 HOH C 10 410 48 HOH HOH . 
O 4 HOH C 11 411 33 HOH HOH . 
O 4 HOH C 12 412 58 HOH HOH . 
O 4 HOH C 13 413 93 HOH HOH . 
O 4 HOH C 14 414 215 HOH HOH . 
O 4 HOH C 15 415 15 HOH HOH . 
O 4 HOH C 16 416 331 HOH HOH . 
P 4 HOH D 1 401 85 HOH HOH . 
P 4 HOH D 2 402 59 HOH HOH . 
P 4 HOH D 3 403 42 HOH HOH . 
P 4 HOH D 4 404 20 HOH HOH . 
P 4 HOH D 5 405 9 HOH HOH . 
P 4 HOH D 6 406 102 HOH HOH . 
P 4 HOH D 7 407 19 HOH HOH . 
P 4 HOH D 8 408 8 HOH HOH . 
P 4 HOH D 9 409 28 HOH HOH . 
P 4 HOH D 10 410 202 HOH HOH . 
P 4 HOH D 11 411 1 HOH HOH . 
P 4 HOH D 12 412 26 HOH HOH . 
P 4 HOH D 13 413 60 HOH HOH . 
P 4 HOH D 14 414 25 HOH HOH . 
P 4 HOH D 15 415 13 HOH HOH . 
P 4 HOH D 16 416 16 HOH HOH . 
P 4 HOH D 17 417 332 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAP . . . G 2 5.093 16.012 43.646 1 24.2 ? PA NAP 301 B 1 
HETATM 2 O O1A NAP . . . G 2 4.425 16.978 44.46 1 24.61 ? O1A NAP 301 B 1 
HETATM 3 O O2A NAP . . . G 2 5.42 14.759 44.268 1 22.06 ? O2A NAP 301 B 1 
HETATM 4 O O5B NAP . . . G 2 4.038 15.782 42.555 1 24.33 ? O5B NAP 301 B 1 
HETATM 5 C C5B NAP . . . G 2 4.15 14.725 41.658 1 25.25 ? C5B NAP 301 B 1 
HETATM 6 C C4B NAP . . . G 2 3.39 14.989 40.41 1 24.94 ? C4B NAP 301 B 1 
HETATM 7 O O4B NAP . . . G 2 3.772 13.959 39.567 1 25.5 ? O4B NAP 301 B 1 
HETATM 8 C C3B NAP . . . G 2 1.951 14.779 40.64 1 25.5 ? C3B NAP 301 B 1 
HETATM 9 O O3B NAP . . . G 2 1.28 15.733 39.887 1 25.31 ? O3B NAP 301 B 1 
HETATM 10 C C2B NAP . . . G 2 1.662 13.429 40.08 1 26.85 ? C2B NAP 301 B 1 
HETATM 11 O O2B NAP . . . G 2 0.305 13.303 39.709 1 29.12 ? O2B NAP 301 B 1 
HETATM 12 C C1B NAP . . . G 2 2.667 13.357 38.97 1 26.56 ? C1B NAP 301 B 1 
HETATM 13 N N9A NAP . . . G 2 2.998 11.989 38.569 1 24.99 ? N9A NAP 301 B 1 
HETATM 14 C C8A NAP . . . G 2 3.704 11.131 39.228 1 24.64 ? C8A NAP 301 B 1 
HETATM 15 N N7A NAP . . . G 2 3.816 9.976 38.597 1 25.04 ? N7A NAP 301 B 1 
HETATM 16 C C5A NAP . . . G 2 3.161 10.093 37.472 1 24.75 ? C5A NAP 301 B 1 
HETATM 17 C C6A NAP . . . G 2 2.876 9.266 36.316 1 23.35 ? C6A NAP 301 B 1 
HETATM 18 N N6A NAP . . . G 2 3.288 8.026 36.177 1 22.86 ? N6A NAP 301 B 1 
HETATM 19 N N1A NAP . . . G 2 2.159 9.774 35.362 1 24.22 ? N1A NAP 301 B 1 
HETATM 20 C C2A NAP . . . G 2 1.7 10.993 35.42 1 25.68 ? C2A NAP 301 B 1 
HETATM 21 N N3A NAP . . . G 2 1.931 11.792 36.43 1 25.96 ? N3A NAP 301 B 1 
HETATM 22 C C4A NAP . . . G 2 2.641 11.42 37.469 1 25.29 ? C4A NAP 301 B 1 
HETATM 23 O O3 NAP . . . G 2 6.298 16.663 42.823 1 22.39 ? O3 NAP 301 B 1 
HETATM 24 P PN NAP . . . G 2 6.798 18.135 42.516 1 20.92 ? PN NAP 301 B 1 
HETATM 25 O O1N NAP . . . G 2 7.437 18.733 43.631 1 21.42 ? O1N NAP 301 B 1 
HETATM 26 O O2N NAP . . . G 2 5.845 18.909 41.816 1 21.38 ? O2N NAP 301 B 1 
HETATM 27 O O5D NAP . . . G 2 7.904 17.975 41.513 1 20.83 ? O5D NAP 301 B 1 
HETATM 28 C C5D NAP . . . G 2 7.67 18.029 40.139 1 21.08 ? C5D NAP 301 B 1 
HETATM 29 C C4D NAP . . . G 2 8.935 17.926 39.363 1 21.26 ? C4D NAP 301 B 1 
HETATM 30 O O4D NAP . . . G 2 9.829 18.817 39.932 1 21.52 ? O4D NAP 301 B 1 
HETATM 31 C C3D NAP . . . G 2 9.553 16.575 39.519 1 21.46 ? C3D NAP 301 B 1 
HETATM 32 O O3D NAP . . . G 2 10.09 16.196 38.28 1 21.03 ? O3D NAP 301 B 1 
HETATM 33 C C2D NAP . . . G 2 10.658 16.8 40.49 1 21.06 ? C2D NAP 301 B 1 
HETATM 34 O O2D NAP . . . G 2 11.725 15.913 40.331 1 20.02 ? O2D NAP 301 B 1 
HETATM 35 C C1D NAP . . . G 2 11.052 18.169 40.088 1 22.06 ? C1D NAP 301 B 1 
HETATM 36 N N1N NAP . . . G 2 11.78 18.774 41.144 1 23.2 ? N1N NAP 301 B 1 
HETATM 37 C C2N NAP . . . G 2 11.147 19.102 42.215 1 24.48 ? C2N NAP 301 B 1 
HETATM 38 C C3N NAP . . . G 2 11.812 19.671 43.242 1 25.29 ? C3N NAP 301 B 1 
HETATM 39 C C7N NAP . . . G 2 11.074 20.014 44.446 1 25.73 ? C7N NAP 301 B 1 
HETATM 40 O O7N NAP . . . G 2 9.922 19.821 44.444 1 26.96 ? O7N NAP 301 B 1 
HETATM 41 N N7N NAP . . . G 2 11.707 20.487 45.456 1 24.72 ? N7N NAP 301 B 1 
HETATM 42 C C4N NAP . . . G 2 13.134 19.924 43.138 1 24.32 ? C4N NAP 301 B 1 
HETATM 43 C C5N NAP . . . G 2 13.735 19.568 41.995 1 23.68 ? C5N NAP 301 B 1 
HETATM 44 C C6N NAP . . . G 2 13.033 18.995 41.009 1 22.99 ? C6N NAP 301 B 1 
HETATM 45 P P2B NAP . . . G 2 -0.588 12.258 40.409 1 29.91 ? P2B NAP 301 B 1 
HETATM 46 O O1X NAP . . . G 2 -0.655 12.661 41.77 1 30.5 ? O1X NAP 301 B 1 
HETATM 47 O O2X NAP . . . G 2 -1.818 12.443 39.671 1 29.44 ? O2X NAP 301 B 1 
HETATM 48 O O3X NAP . . . G 2 0.106 11.017 40.271 1 27.41 ? O3X NAP 301 B 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           337 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           48 
#