data_8HH2 # _model_server_result.job_id -m90ugbUbeobwC95IZbSXA _model_server_result.datetime_utc '2024-12-18 19:44:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hh2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":502}' # _entry.id 8HH2 # _exptl.entry_id 8HH2 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 94.971 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 N N N ? 6 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 175 A THR 176 1_555 I MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc2 H O1G ATP . A ATP 600 1_555 I MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc3 H O1B ATP . A ATP 600 1_555 I MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc4 B OG1 THR 175 B THR 176 1_555 K MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc5 J O2G ATP . B ATP 600 1_555 K MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? metalc ? metalc6 J O2B ATP . B ATP 600 1_555 K MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc7 C OG1 THR 175 C THR 176 1_555 L MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc8 L MG MG . C MG 601 1_555 M O2B ATP . C ATP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.635 ? metalc ? metalc9 L MG MG . C MG 601 1_555 M O1G ATP . C ATP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc10 O MG MG . D MG 502 1_555 P O1B ADP . D ADP 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc11 F OG1 THR 176 F THR 165 1_555 S MG MG . F MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc12 F OE2 GLU 201 F GLU 190 1_555 S MG MG . F MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.786 ? metalc ? metalc13 S MG MG . F MG 601 1_555 T O3G ATP . F ATP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc14 S MG MG . F MG 601 1_555 T O2B ATP . F ATP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 351 n n P O2 PO4 sing 352 n n P O3 PO4 sing 353 n n P O4 PO4 sing 354 n n # _atom_sites.entry_id 8HH2 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 4 ATP A 1 600 600 ATP ATP . I 5 MG A 1 601 601 MG MG . J 4 ATP B 1 600 600 ATP ATP . K 5 MG B 1 601 601 MG MG . L 5 MG C 1 601 601 MG MG . M 4 ATP C 1 602 600 ATP ATP . N 6 PO4 D 1 501 603 PO4 PO4 . O 5 MG D 1 502 601 MG MG . P 7 ADP D 1 503 602 ADP ADP . Q 4 ATP E 1 501 501 ATP ATP . R 6 PO4 E 1 502 502 PO4 PO4 . S 5 MG F 1 601 601 MG MG . T 4 ATP F 1 602 602 ATP ATP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . R 6 155.63 188.794 123.264 1 86.06 ? P PO4 502 E 1 HETATM 2 O O1 PO4 . . . R 6 156.529 188.811 122.037 1 86.06 ? O1 PO4 502 E 1 HETATM 3 O O2 PO4 . . . R 6 154.207 188.456 122.853 1 86.06 ? O2 PO4 502 E 1 HETATM 4 O O3 PO4 . . . R 6 155.659 190.164 123.926 1 86.06 ? O3 PO4 502 E 1 HETATM 5 O O4 PO4 . . . R 6 156.124 187.742 124.246 1 86.06 ? O4 PO4 502 E 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 228 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #