data_8HHA
#
_model_server_result.job_id            BHIqk3WvnwCAaTZwvIljAQ 
_model_server_result.datetime_utc      '2025-07-30 12:31:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8hha 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"R","auth_seq_id":602}' 
#
_entry.id    8HHA 
#
_exptl.entry_id    8HHA 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    heptameric 
_pdbx_struct_assembly.oligomeric_count      7 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 H N N 
? 4 J N N 
? 4 M N N 
? 4 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 175 A THR 176 1_555 I MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? 
metalc ? metalc2 H O1G ATP . A ATP 600 1_555 I MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
metalc ? metalc3 J O2G ATP . B ATP 600 1_555 K MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? 
metalc ? metalc4 C OG1 THR 175 C THR 176 1_555 L MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? 
metalc ? metalc5 L MG MG . C MG 601 1_555 M O1G ATP . C ATP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
metalc ? metalc6 L MG MG . C MG 601 1_555 M O2B ATP . C ATP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
metalc ? metalc7 L MG MG . C MG 601 1_555 M O3B ATP . C ATP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.803 ? 
metalc ? metalc8 D OG1 THR 176 D THR 165 1_555 N MG MG . D MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? 
metalc ? metalc9 N MG MG . D MG 601 1_555 O O3 PO4 . D PO4 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? 
metalc ? metalc10 N MG MG . D MG 601 1_555 O O4 PO4 . D PO4 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? 
metalc ? metalc11 N MG MG . D MG 601 1_555 P O3B ADP . D ADP 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? 
metalc ? metalc12 F OG1 THR 176 F THR 165 1_555 Q MG MG . F MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
metalc ? metalc13 F OE1 GLU 201 F GLU 190 1_555 Q MG MG . F MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? 
metalc ? metalc14 F OE2 GLU 205 F GLU 194 1_555 Q MG MG . F MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.861 ? 
metalc ? metalc15 Q MG MG . F MG 601 1_555 R O3G ATP . F ATP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 114 n n 
PG O2G ATP sing 115 n n 
PG O3G ATP sing 116 n n 
PG O3B ATP sing 117 n n 
O2G HOG2 ATP sing 118 n n 
O3G HOG3 ATP sing 119 n n 
PB O1B ATP doub 120 n n 
PB O2B ATP sing 121 n n 
PB O3B ATP sing 122 n n 
PB O3A ATP sing 123 n n 
O2B HOB2 ATP sing 124 n n 
PA O1A ATP doub 125 n n 
PA O2A ATP sing 126 n n 
PA O3A ATP sing 127 n n 
PA O5' ATP sing 128 n n 
O2A HOA2 ATP sing 129 n n 
O5' C5' ATP sing 130 n n 
C5' C4' ATP sing 131 n n 
C5' "H5'1" ATP sing 132 n n 
C5' "H5'2" ATP sing 133 n n 
C4' O4' ATP sing 134 n n 
C4' C3' ATP sing 135 n n 
C4' H4' ATP sing 136 n n 
O4' C1' ATP sing 137 n n 
C3' O3' ATP sing 138 n n 
C3' C2' ATP sing 139 n n 
C3' H3' ATP sing 140 n n 
O3' HO3' ATP sing 141 n n 
C2' O2' ATP sing 142 n n 
C2' C1' ATP sing 143 n n 
C2' H2' ATP sing 144 n n 
O2' HO2' ATP sing 145 n n 
C1' N9 ATP sing 146 n n 
C1' H1' ATP sing 147 n n 
N9 C8 ATP sing 148 n y 
N9 C4 ATP sing 149 n y 
C8 N7 ATP doub 150 n y 
C8 H8 ATP sing 151 n n 
N7 C5 ATP sing 152 n y 
C5 C6 ATP sing 153 n y 
C5 C4 ATP doub 154 n y 
C6 N6 ATP sing 155 n n 
C6 N1 ATP doub 156 n y 
N6 HN61 ATP sing 157 n n 
N6 HN62 ATP sing 158 n n 
N1 C2 ATP sing 159 n y 
C2 N3 ATP doub 160 n y 
C2 H2 ATP sing 161 n n 
N3 C4 ATP sing 162 n y 
#
_atom_sites.entry_id                     8HHA 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
H 4 ATP A 1 600 600 ATP ATP . 
I 5 MG A 1 601 601 MG MG . 
J 4 ATP B 1 600 600 ATP ATP . 
K 5 MG B 1 601 601 MG MG . 
L 5 MG C 1 601 601 MG MG . 
M 4 ATP C 1 602 600 ATP ATP . 
N 5 MG D 1 601 601 MG MG . 
O 6 PO4 D 1 602 603 PO4 PO4 . 
P 7 ADP D 1 603 602 ADP ADP . 
Q 5 MG F 1 601 601 MG MG . 
R 4 ATP F 1 602 602 ATP ATP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . R 4 180.277 173.19 196.869 1 62.02 ? PG ATP 602 F 1 
HETATM 2 O O1G ATP . . . R 4 181.041 171.898 196.937 1 62.02 ? O1G ATP 602 F 1 
HETATM 3 O O2G ATP . . . R 4 178.924 173.109 197.532 1 62.02 ? O2G ATP 602 F 1 
HETATM 4 O O3G ATP . . . R 4 181.091 174.374 197.341 1 62.02 ? O3G ATP 602 F 1 
HETATM 5 P PB ATP . . . R 4 180.262 174.531 194.25 1 62.02 ? PB ATP 602 F 1 
HETATM 6 O O1B ATP . . . R 4 179.041 174.65 193.427 1 62.02 ? O1B ATP 602 F 1 
HETATM 7 O O2B ATP . . . R 4 180.758 175.707 194.987 1 62.02 ? O2B ATP 602 F 1 
HETATM 8 O O3B ATP . . . R 4 179.994 173.365 195.301 1 62.02 ? O3B ATP 602 F 1 
HETATM 9 P PA ATP . . . R 4 182.836 174.536 192.812 1 62.02 ? PA ATP 602 F 1 
HETATM 10 O O1A ATP . . . R 4 183.946 174.16 193.728 1 62.02 ? O1A ATP 602 F 1 
HETATM 11 O O2A ATP . . . R 4 182.663 175.985 192.526 1 62.02 ? O2A ATP 602 F 1 
HETATM 12 O O3A ATP . . . R 4 181.452 173.943 193.359 1 62.02 ? O3A ATP 602 F 1 
HETATM 13 O O5' ATP . . . R 4 182.981 173.735 191.437 1 62.02 ? O5' ATP 602 F 1 
HETATM 14 C C5' ATP . . . R 4 183.664 172.462 191.429 1 62.02 ? C5' ATP 602 F 1 
HETATM 15 C C4' ATP . . . R 4 184.365 172.281 190.107 1 62.02 ? C4' ATP 602 F 1 
HETATM 16 O O4' ATP . . . R 4 183.532 172.824 189.058 1 62.02 ? O4' ATP 602 F 1 
HETATM 17 C C3' ATP . . . R 4 185.69 173.026 189.943 1 62.02 ? C3' ATP 602 F 1 
HETATM 18 O O3' ATP . . . R 4 186.773 172.239 190.414 1 62.02 ? O3' ATP 602 F 1 
HETATM 19 C C2' ATP . . . R 4 185.787 173.205 188.427 1 62.02 ? C2' ATP 602 F 1 
HETATM 20 O O2' ATP . . . R 4 186.453 172.149 187.775 1 62.02 ? O2' ATP 602 F 1 
HETATM 21 C C1' ATP . . . R 4 184.329 173.259 187.983 1 62.02 ? C1' ATP 602 F 1 
HETATM 22 N N9 ATP . . . R 4 183.911 174.591 187.635 1 62.02 ? N9 ATP 602 F 1 
HETATM 23 C C8 ATP . . . R 4 182.985 175.358 188.282 1 62.02 ? C8 ATP 602 F 1 
HETATM 24 N N7 ATP . . . R 4 182.828 176.534 187.722 1 62.02 ? N7 ATP 602 F 1 
HETATM 25 C C5 ATP . . . R 4 183.71 176.533 186.65 1 62.02 ? C5 ATP 602 F 1 
HETATM 26 C C6 ATP . . . R 4 184.016 177.492 185.671 1 62.02 ? C6 ATP 602 F 1 
HETATM 27 N N6 ATP . . . R 4 183.443 178.689 185.612 1 62.02 ? N6 ATP 602 F 1 
HETATM 28 N N1 ATP . . . R 4 184.95 177.164 184.749 1 62.02 ? N1 ATP 602 F 1 
HETATM 29 C C2 ATP . . . R 4 185.523 175.956 184.818 1 62.02 ? C2 ATP 602 F 1 
HETATM 30 N N3 ATP . . . R 4 185.31 174.976 185.688 1 62.02 ? N3 ATP 602 F 1 
HETATM 31 C C4 ATP . . . R 4 184.383 175.335 186.589 1 62.02 ? C4 ATP 602 F 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    83 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           31 
#