data_8HJB # _model_server_result.job_id cg270xDQTdwRGpvTxZJuvw _model_server_result.datetime_utc '2024-10-21 02:02:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hjb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 8HJB # _exptl.entry_id 8HJB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8HJB _cell.length_a 44.043 _cell.length_b 44.043 _cell.length_c 228.663 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HJB _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall 'P 4w' _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 70 n y N1A C6A COA doub 71 n y C2A N3A COA doub 72 n y C2A H2A COA sing 73 n n N3A C4A COA sing 74 n y C4A C5A COA doub 75 n y C4A N9A COA sing 76 n y C5A C6A COA sing 77 n y C5A N7A COA sing 78 n y C6A N6A COA sing 79 n n N6A H61A COA sing 80 n n N6A H62A COA sing 81 n n N7A C8A COA doub 82 n y C8A N9A COA sing 83 n y C8A H8A COA sing 84 n n N9A C1B COA sing 85 n n C1B C2B COA sing 86 n n C1B O4B COA sing 87 n n C1B H1B COA sing 88 n n C2B O2B COA sing 89 n n C2B C3B COA sing 90 n n C2B H2B COA sing 91 n n O2B HO2A COA sing 92 n n C3B O3B COA sing 93 n n C3B C4B COA sing 94 n n C3B H3B COA sing 95 n n O3B P3B COA sing 96 n n P3B O7A COA doub 97 n n P3B O8A COA sing 98 n n P3B O9A COA sing 99 n n O8A HOA8 COA sing 100 n n O9A HOA9 COA sing 101 n n C4B O4B COA sing 102 n n C4B C5B COA sing 103 n n C4B H4B COA sing 104 n n C5B O5B COA sing 105 n n C5B H51A COA sing 106 n n C5B H52A COA sing 107 n n O5B P1A COA sing 108 n n P1A O1A COA doub 109 n n P1A O2A COA sing 110 n n P1A O3A COA sing 111 n n O2A HOA2 COA sing 112 n n O3A P2A COA sing 113 n n P2A O4A COA doub 114 n n P2A O5A COA sing 115 n n P2A O6A COA sing 116 n n O5A HOA5 COA sing 117 n n O6A CCP COA sing 118 n n CBP CCP COA sing 119 n n CBP CDP COA sing 120 n n CBP CEP COA sing 121 n n CBP CAP COA sing 122 n n CCP H121 COA sing 123 n n CCP H122 COA sing 124 n n CDP H131 COA sing 125 n n CDP H132 COA sing 126 n n CDP H133 COA sing 127 n n CEP H141 COA sing 128 n n CEP H142 COA sing 129 n n CEP H143 COA sing 130 n n CAP OAP COA sing 131 n n CAP C9P COA sing 132 n n CAP H10 COA sing 133 n n OAP HO1 COA sing 134 n n C9P O9P COA doub 135 n n C9P N8P COA sing 136 n n N8P C7P COA sing 137 n n N8P HN8 COA sing 138 n n C7P C6P COA sing 139 n n C7P H71 COA sing 140 n n C7P H72 COA sing 141 n n C6P C5P COA sing 142 n n C6P H61 COA sing 143 n n C6P H62 COA sing 144 n n C5P O5P COA doub 145 n n C5P N4P COA sing 146 n n N4P C3P COA sing 147 n n N4P HN4 COA sing 148 n n C3P C2P COA sing 149 n n C3P H31 COA sing 150 n n C3P H32 COA sing 151 n n C2P S1P COA sing 152 n n C2P H21 COA sing 153 n n C2P H22 COA sing 154 n n S1P HS1 COA sing 155 n n # _atom_sites.entry_id 8HJB _atom_sites.fract_transf_matrix[1][1] 0.022705 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022705 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004373 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 COA A 1 301 301 COA COA . D 3 HOH A 1 401 58 HOH HOH . D 3 HOH A 2 402 96 HOH HOH . D 3 HOH A 3 403 13 HOH HOH . D 3 HOH A 4 404 36 HOH HOH . D 3 HOH A 5 405 79 HOH HOH . D 3 HOH A 6 406 46 HOH HOH . D 3 HOH A 7 407 22 HOH HOH . D 3 HOH A 8 408 109 HOH HOH . D 3 HOH A 9 409 24 HOH HOH . D 3 HOH A 10 410 9 HOH HOH . D 3 HOH A 11 411 11 HOH HOH . D 3 HOH A 12 412 112 HOH HOH . D 3 HOH A 13 413 101 HOH HOH . D 3 HOH A 14 414 99 HOH HOH . D 3 HOH A 15 415 75 HOH HOH . D 3 HOH A 16 416 89 HOH HOH . D 3 HOH A 17 417 76 HOH HOH . D 3 HOH A 18 418 61 HOH HOH . D 3 HOH A 19 419 107 HOH HOH . D 3 HOH A 20 420 2 HOH HOH . D 3 HOH A 21 421 87 HOH HOH . D 3 HOH A 22 422 26 HOH HOH . D 3 HOH A 23 423 68 HOH HOH . D 3 HOH A 24 424 17 HOH HOH . D 3 HOH A 25 425 57 HOH HOH . D 3 HOH A 26 426 16 HOH HOH . D 3 HOH A 27 427 27 HOH HOH . D 3 HOH A 28 428 95 HOH HOH . D 3 HOH A 29 429 78 HOH HOH . D 3 HOH A 30 430 18 HOH HOH . D 3 HOH A 31 431 44 HOH HOH . D 3 HOH A 32 432 72 HOH HOH . D 3 HOH A 33 433 63 HOH HOH . D 3 HOH A 34 434 49 HOH HOH . D 3 HOH A 35 435 71 HOH HOH . D 3 HOH A 36 436 21 HOH HOH . D 3 HOH A 37 437 47 HOH HOH . D 3 HOH A 38 438 32 HOH HOH . D 3 HOH A 39 439 45 HOH HOH . D 3 HOH A 40 440 59 HOH HOH . D 3 HOH A 41 441 70 HOH HOH . D 3 HOH A 42 442 98 HOH HOH . D 3 HOH A 43 443 53 HOH HOH . D 3 HOH A 44 444 92 HOH HOH . D 3 HOH A 45 445 91 HOH HOH . D 3 HOH A 46 446 52 HOH HOH . D 3 HOH A 47 447 88 HOH HOH . D 3 HOH A 48 448 74 HOH HOH . D 3 HOH A 49 449 41 HOH HOH . D 3 HOH A 50 450 30 HOH HOH . D 3 HOH A 51 451 51 HOH HOH . D 3 HOH A 52 452 48 HOH HOH . D 3 HOH A 53 453 67 HOH HOH . D 3 HOH A 54 454 42 HOH HOH . D 3 HOH A 55 455 55 HOH HOH . E 3 HOH B 1 301 19 HOH HOH . E 3 HOH B 2 302 14 HOH HOH . E 3 HOH B 3 303 3 HOH HOH . E 3 HOH B 4 304 25 HOH HOH . E 3 HOH B 5 305 64 HOH HOH . E 3 HOH B 6 306 29 HOH HOH . E 3 HOH B 7 307 8 HOH HOH . E 3 HOH B 8 308 69 HOH HOH . E 3 HOH B 9 309 10 HOH HOH . E 3 HOH B 10 310 1 HOH HOH . E 3 HOH B 11 311 86 HOH HOH . E 3 HOH B 12 312 20 HOH HOH . E 3 HOH B 13 313 15 HOH HOH . E 3 HOH B 14 314 6 HOH HOH . E 3 HOH B 15 315 97 HOH HOH . E 3 HOH B 16 316 4 HOH HOH . E 3 HOH B 17 317 105 HOH HOH . E 3 HOH B 18 318 12 HOH HOH . E 3 HOH B 19 319 5 HOH HOH . E 3 HOH B 20 320 40 HOH HOH . E 3 HOH B 21 321 23 HOH HOH . E 3 HOH B 22 322 28 HOH HOH . E 3 HOH B 23 323 104 HOH HOH . E 3 HOH B 24 324 31 HOH HOH . E 3 HOH B 25 325 90 HOH HOH . E 3 HOH B 26 326 7 HOH HOH . E 3 HOH B 27 327 82 HOH HOH . E 3 HOH B 28 328 108 HOH HOH . E 3 HOH B 29 329 93 HOH HOH . E 3 HOH B 30 330 50 HOH HOH . E 3 HOH B 31 331 33 HOH HOH . E 3 HOH B 32 332 84 HOH HOH . E 3 HOH B 33 333 37 HOH HOH . E 3 HOH B 34 334 39 HOH HOH . E 3 HOH B 35 335 62 HOH HOH . E 3 HOH B 36 336 65 HOH HOH . E 3 HOH B 37 337 80 HOH HOH . E 3 HOH B 38 338 66 HOH HOH . E 3 HOH B 39 339 38 HOH HOH . E 3 HOH B 40 340 81 HOH HOH . E 3 HOH B 41 341 102 HOH HOH . E 3 HOH B 42 342 106 HOH HOH . E 3 HOH B 43 343 83 HOH HOH . E 3 HOH B 44 344 73 HOH HOH . E 3 HOH B 45 345 54 HOH HOH . E 3 HOH B 46 346 60 HOH HOH . E 3 HOH B 47 347 56 HOH HOH . E 3 HOH B 48 348 103 HOH HOH . E 3 HOH B 49 349 111 HOH HOH . E 3 HOH B 50 350 35 HOH HOH . E 3 HOH B 51 351 34 HOH HOH . E 3 HOH B 52 352 43 HOH HOH . E 3 HOH B 53 353 100 HOH HOH . E 3 HOH B 54 354 85 HOH HOH . E 3 HOH B 55 355 110 HOH HOH . E 3 HOH B 56 356 77 HOH HOH . E 3 HOH B 57 357 94 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . C 2 17.834 19.314 -4.419 1 44.45 ? N1A COA 301 A 1 HETATM 2 C C2A COA . . . C 2 17.031 20.365 -4.376 1 45.23 ? C2A COA 301 A 1 HETATM 3 N N3A COA . . . C 2 16.762 21.073 -5.466 1 48.81 ? N3A COA 301 A 1 HETATM 4 C C4A COA . . . C 2 17.294 20.745 -6.634 1 48.71 ? C4A COA 301 A 1 HETATM 5 C C5A COA . . . C 2 18.135 19.658 -6.717 1 46.03 ? C5A COA 301 A 1 HETATM 6 C C6A COA . . . C 2 18.396 18.93 -5.536 1 45.82 ? C6A COA 301 A 1 HETATM 7 N N6A COA . . . C 2 19.287 17.759 -5.565 1 44.82 ? N6A COA 301 A 1 HETATM 8 N N7A COA . . . C 2 18.517 19.559 -7.978 1 46.47 ? N7A COA 301 A 1 HETATM 9 C C8A COA . . . C 2 17.942 20.545 -8.671 1 45.32 ? C8A COA 301 A 1 HETATM 10 N N9A COA . . . C 2 17.206 21.261 -7.879 1 49.58 ? N9A COA 301 A 1 HETATM 11 C C1B COA . . . C 2 16.432 22.426 -8.292 1 54.54 ? C1B COA 301 A 1 HETATM 12 C C2B COA . . . C 2 15.387 22.076 -9.001 1 52.31 ? C2B COA 301 A 1 HETATM 13 O O2B COA . . . C 2 15.746 21.82 -10.361 1 52.17 ? O2B COA 301 A 1 HETATM 14 C C3B COA . . . C 2 14.401 23.427 -8.906 1 53.02 ? C3B COA 301 A 1 HETATM 15 O O3B COA . . . C 2 14.886 24.447 -9.8 1 54.98 ? O3B COA 301 A 1 HETATM 16 P P3B COA . . . C 2 15.68 25.78 -9.188 1 63.5 ? P3B COA 301 A 1 HETATM 17 O O7A COA . . . C 2 16.759 25.341 -8.273 1 55.06 -1 O7A COA 301 A 1 HETATM 18 O O8A COA . . . C 2 14.721 26.636 -8.453 1 59.09 -1 O8A COA 301 A 1 HETATM 19 O O9A COA . . . C 2 16.278 26.562 -10.316 1 59.26 ? O9A COA 301 A 1 HETATM 20 C C4B COA . . . C 2 14.456 23.811 -7.687 1 56.92 ? C4B COA 301 A 1 HETATM 21 O O4B COA . . . C 2 15.8 23.145 -7.085 1 58.83 ? O4B COA 301 A 1 HETATM 22 C C5B COA . . . C 2 13.209 23.298 -6.957 1 55.46 ? C5B COA 301 A 1 HETATM 23 O O5B COA . . . C 2 13.453 23.019 -5.557 1 55.43 ? O5B COA 301 A 1 HETATM 24 P P1A COA . . . C 2 12.496 23.882 -4.388 1 59.19 ? P1A COA 301 A 1 HETATM 25 O O1A COA . . . C 2 13.344 24.177 -3.164 1 53.7 -1 O1A COA 301 A 1 HETATM 26 O O2A COA . . . C 2 12.068 25.156 -4.986 1 56 ? O2A COA 301 A 1 HETATM 27 O O3A COA . . . C 2 11.131 23.042 -3.923 1 61.63 ? O3A COA 301 A 1 HETATM 28 P P2A COA . . . C 2 10.846 21.417 -4.047 1 68.76 ? P2A COA 301 A 1 HETATM 29 O O4A COA . . . C 2 12.12 20.685 -4.208 1 60.05 -1 O4A COA 301 A 1 HETATM 30 O O5A COA . . . C 2 10.131 20.93 -2.756 1 52.95 ? O5A COA 301 A 1 HETATM 31 O O6A COA . . . C 2 9.864 21.128 -5.322 1 53.22 ? O6A COA 301 A 1 HETATM 32 C CBP COA . . . C 2 9.271 22.543 -7.197 1 51.85 ? CBP COA 301 A 1 HETATM 33 C CCP COA . . . C 2 10.277 21.499 -6.595 1 54.12 ? CCP COA 301 A 1 HETATM 34 C CDP COA . . . C 2 8.822 23.474 -6.099 1 49.25 ? CDP COA 301 A 1 HETATM 35 C CEP COA . . . C 2 8.09 21.825 -7.765 1 50.19 ? CEP COA 301 A 1 HETATM 36 C CAP COA . . . C 2 9.96 23.372 -8.317 1 53.62 ? CAP COA 301 A 1 HETATM 37 O OAP COA . . . C 2 10.865 22.567 -9.021 1 55 ? OAP COA 301 A 1 HETATM 38 C C9P COA . . . C 2 8.919 24.066 -9.208 1 52.76 ? C9P COA 301 A 1 HETATM 39 O O9P COA . . . C 2 8.424 25.049 -8.796 1 56.12 ? O9P COA 301 A 1 HETATM 40 N N8P COA . . . C 2 8.485 23.615 -10.538 1 55.16 ? N8P COA 301 A 1 HETATM 41 C C7P COA . . . C 2 8.974 22.41 -11.252 1 49.86 ? C7P COA 301 A 1 HETATM 42 C C6P COA . . . C 2 7.863 21.808 -12.129 1 49.59 ? C6P COA 301 A 1 HETATM 43 C C5P COA . . . C 2 6.797 21.124 -11.307 1 49.1 ? C5P COA 301 A 1 # _model_server_stats.io_time_ms 80 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 43 #