data_8HJT # _model_server_result.job_id yfjtVyo2GFSaIV8IdJvTaw _model_server_result.datetime_utc '2024-11-20 17:42:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hjt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":602}' # _entry.id 8HJT # _exptl.entry_id 8HJT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8HJT _cell.length_a 78.188 _cell.length_b 78.188 _cell.length_c 299.827 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HJT _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall 'P 32 2"' _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 8HJT _atom_sites.fract_transf_matrix[1][1] 0.01279 _atom_sites.fract_transf_matrix[1][2] 0.007384 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014768 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003335 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 H6P C 1 601 1 H6P H6P . F 4 EPE C 1 602 1 EPE EPE . G 3 H6P D 1 601 2 H6P H6P . H 5 HOH A 1 601 63 HOH HOH . H 5 HOH A 2 602 112 HOH HOH . H 5 HOH A 3 603 62 HOH HOH . H 5 HOH A 4 604 4 HOH HOH . H 5 HOH A 5 605 70 HOH HOH . H 5 HOH A 6 606 78 HOH HOH . H 5 HOH A 7 607 1 HOH HOH . H 5 HOH A 8 608 66 HOH HOH . H 5 HOH A 9 609 65 HOH HOH . H 5 HOH A 10 610 68 HOH HOH . H 5 HOH A 11 611 60 HOH HOH . H 5 HOH A 12 612 58 HOH HOH . H 5 HOH A 13 613 24 HOH HOH . H 5 HOH A 14 614 32 HOH HOH . H 5 HOH A 15 615 41 HOH HOH . H 5 HOH A 16 616 64 HOH HOH . H 5 HOH A 17 617 69 HOH HOH . H 5 HOH A 18 618 23 HOH HOH . H 5 HOH A 19 619 72 HOH HOH . H 5 HOH A 20 620 59 HOH HOH . H 5 HOH A 21 621 84 HOH HOH . H 5 HOH A 22 622 71 HOH HOH . H 5 HOH A 23 623 34 HOH HOH . H 5 HOH A 24 624 83 HOH HOH . H 5 HOH A 25 625 42 HOH HOH . H 5 HOH A 26 626 61 HOH HOH . H 5 HOH A 27 627 99 HOH HOH . H 5 HOH A 28 628 21 HOH HOH . H 5 HOH A 29 629 67 HOH HOH . H 5 HOH A 30 630 108 HOH HOH . I 5 HOH B 1 601 73 HOH HOH . I 5 HOH B 2 602 5 HOH HOH . I 5 HOH B 3 603 7 HOH HOH . I 5 HOH B 4 604 106 HOH HOH . I 5 HOH B 5 605 22 HOH HOH . I 5 HOH B 6 606 74 HOH HOH . I 5 HOH B 7 607 25 HOH HOH . I 5 HOH B 8 608 76 HOH HOH . I 5 HOH B 9 609 55 HOH HOH . I 5 HOH B 10 610 31 HOH HOH . I 5 HOH B 11 611 30 HOH HOH . I 5 HOH B 12 612 33 HOH HOH . J 5 HOH C 1 701 35 HOH HOH . J 5 HOH C 2 702 9 HOH HOH . J 5 HOH C 3 703 11 HOH HOH . J 5 HOH C 4 704 40 HOH HOH . J 5 HOH C 5 705 46 HOH HOH . J 5 HOH C 6 706 19 HOH HOH . J 5 HOH C 7 707 17 HOH HOH . J 5 HOH C 8 708 50 HOH HOH . J 5 HOH C 9 709 39 HOH HOH . J 5 HOH C 10 710 107 HOH HOH . J 5 HOH C 11 711 28 HOH HOH . J 5 HOH C 12 712 89 HOH HOH . J 5 HOH C 13 713 57 HOH HOH . J 5 HOH C 14 714 48 HOH HOH . J 5 HOH C 15 715 45 HOH HOH . J 5 HOH C 16 716 8 HOH HOH . J 5 HOH C 17 717 6 HOH HOH . J 5 HOH C 18 718 103 HOH HOH . J 5 HOH C 19 719 29 HOH HOH . J 5 HOH C 20 720 47 HOH HOH . J 5 HOH C 21 721 52 HOH HOH . J 5 HOH C 22 722 37 HOH HOH . J 5 HOH C 23 723 12 HOH HOH . J 5 HOH C 24 724 88 HOH HOH . J 5 HOH C 25 725 16 HOH HOH . J 5 HOH C 26 726 110 HOH HOH . J 5 HOH C 27 727 79 HOH HOH . J 5 HOH C 28 728 20 HOH HOH . J 5 HOH C 29 729 82 HOH HOH . J 5 HOH C 30 730 36 HOH HOH . J 5 HOH C 31 731 27 HOH HOH . J 5 HOH C 32 732 43 HOH HOH . J 5 HOH C 33 733 53 HOH HOH . J 5 HOH C 34 734 85 HOH HOH . J 5 HOH C 35 735 15 HOH HOH . J 5 HOH C 36 736 90 HOH HOH . J 5 HOH C 37 737 80 HOH HOH . J 5 HOH C 38 738 101 HOH HOH . J 5 HOH C 39 739 18 HOH HOH . J 5 HOH C 40 740 87 HOH HOH . J 5 HOH C 41 741 104 HOH HOH . J 5 HOH C 42 742 81 HOH HOH . J 5 HOH C 43 743 38 HOH HOH . J 5 HOH C 44 744 44 HOH HOH . J 5 HOH C 45 745 49 HOH HOH . J 5 HOH C 46 746 75 HOH HOH . J 5 HOH C 47 747 26 HOH HOH . J 5 HOH C 48 748 54 HOH HOH . J 5 HOH C 49 749 91 HOH HOH . J 5 HOH C 50 750 105 HOH HOH . J 5 HOH C 51 751 86 HOH HOH . J 5 HOH C 52 752 51 HOH HOH . K 5 HOH D 1 701 95 HOH HOH . K 5 HOH D 2 702 2 HOH HOH . K 5 HOH D 3 703 100 HOH HOH . K 5 HOH D 4 704 13 HOH HOH . K 5 HOH D 5 705 10 HOH HOH . K 5 HOH D 6 706 98 HOH HOH . K 5 HOH D 7 707 109 HOH HOH . K 5 HOH D 8 708 14 HOH HOH . K 5 HOH D 9 709 94 HOH HOH . K 5 HOH D 10 710 102 HOH HOH . K 5 HOH D 11 711 111 HOH HOH . K 5 HOH D 12 712 93 HOH HOH . K 5 HOH D 13 713 56 HOH HOH . K 5 HOH D 14 714 3 HOH HOH . K 5 HOH D 15 715 96 HOH HOH . K 5 HOH D 16 716 97 HOH HOH . K 5 HOH D 17 717 92 HOH HOH . K 5 HOH D 18 718 77 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . F 4 51.852 -8.98 -28.109 1 29.58 ? N1 EPE 602 C 1 HETATM 2 C C2 EPE . . . F 4 52.582 -10.065 -27.431 1 22.16 ? C2 EPE 602 C 1 HETATM 3 C C3 EPE . . . F 4 51.995 -11.424 -27.806 1 26.17 ? C3 EPE 602 C 1 HETATM 4 N N4 EPE . . . F 4 50.549 -11.454 -27.673 1 29.26 ? N4 EPE 602 C 1 HETATM 5 C C5 EPE . . . F 4 49.803 -10.319 -28.172 1 29.95 ? C5 EPE 602 C 1 HETATM 6 C C6 EPE . . . F 4 50.436 -9.012 -27.719 1 35.72 ? C6 EPE 602 C 1 HETATM 7 C C7 EPE . . . F 4 49.865 -12.729 -27.574 1 25.47 ? C7 EPE 602 C 1 HETATM 8 C C8 EPE . . . F 4 49.204 -13.143 -28.885 1 26.89 ? C8 EPE 602 C 1 HETATM 9 O O8 EPE . . . F 4 50.167 -13.682 -29.766 1 31.48 ? O8 EPE 602 C 1 HETATM 10 C C9 EPE . . . F 4 52.395 -7.685 -27.682 1 31.04 ? C9 EPE 602 C 1 HETATM 11 C C10 EPE . . . F 4 53.101 -6.996 -28.841 1 28.42 ? C10 EPE 602 C 1 HETATM 12 S S EPE . . . F 4 53.482 -5.272 -28.445 1 34.24 ? S EPE 602 C 1 HETATM 13 O O1S EPE . . . F 4 52.54 -4.385 -29.122 1 38.26 ? O1S EPE 602 C 1 HETATM 14 O O2S EPE . . . F 4 54.844 -4.968 -28.876 1 30.91 ? O2S EPE 602 C 1 HETATM 15 O O3S EPE . . . F 4 53.365 -5.069 -27.002 1 38.87 ? O3S EPE 602 C 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 15 #