data_8HJV # _model_server_result.job_id zdwT2pTB8NTdlMjfFWI6eA _model_server_result.datetime_utc '2025-04-05 03:05:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hjv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"ZB","auth_seq_id":1004}' # _entry.id 8HJV # _exptl.entry_id 8HJV _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 55.845 _entity.id 12 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (III) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 35-meric _pdbx_struct_assembly.oligomeric_count 35 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC,HC,IC,JC,KC,LC,MC,NC,OC,PC,QC,RC,SC,TC,UC,VC,WC,XC _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 12 _struct_asym.id ZB _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 HA SG CYS 118 C CYS 118 1_555 UC CAB HEM . C HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? covale ? covale2 HA SG CYS 121 C CYS 121 1_555 UC CAC HEM . C HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.909 ? covale ? covale3 HA SG CYS 171 C CYS 171 1_555 VC CAB HEM . C HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.885 ? covale ? covale4 HA SG CYS 174 C CYS 174 1_555 VC CAC HEM . C HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? covale ? covale5 HA SG CYS 293 C CYS 293 1_555 XC CAB HEM . C HEM 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.886 ? covale ? covale6 HA SG CYS 296 C CYS 296 1_555 XC CAC HEM . C HEM 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? metalc ? metalc1 U NE2 HIS 229 L HIS 229 1_555 ZB FE FE . M FE 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? metalc ? metalc2 V NE2 HIS 208 M HIS 542 1_555 ZB FE FE . M FE 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc3 V OE1 GLU 223 M GLU 557 1_555 ZB FE FE . M FE 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc4 V OE2 GLU 223 M GLU 557 1_555 ZB FE FE . M FE 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.961 ? metalc ? metalc5 V NE2 HIS 255 M HIS 589 1_555 ZB FE FE . M FE 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc6 HA SD MET 106 C MET 106 1_555 UC FE HEM . C HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc7 HA NE2 HIS 122 C HIS 122 1_555 UC FE HEM . C HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc8 HA SD MET 145 C MET 145 1_555 VC FE HEM . C HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc9 HA NE2 HIS 175 C HIS 175 1_555 VC FE HEM . C HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc10 HA SD MET 229 C MET 229 1_555 WC FE HEM . C HEM 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc11 HA NE2 HIS 244 C HIS 244 1_555 WC FE HEM . C HEM 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc12 HA SD MET 263 C MET 263 1_555 XC FE HEM . C HEM 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc13 HA NE2 HIS 297 C HIS 297 1_555 XC FE HEM . C HEM 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? # _chem_comp.formula 'Fe 3' _chem_comp.formula_weight 55.845 _chem_comp.id FE _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8HJV _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code JA 8 BCL 0 1 101 101 BCL BCL . KA 8 BCL 0 1 102 101 BCL BCL . LA 8 BCL 1 1 101 101 BCL BCL . MA 8 BCL 2 1 101 101 BCL BCL . NA 8 BCL 2 1 102 102 BCL BCL . OA 8 BCL 3 1 101 101 BCL BCL . PA 8 BCL 4 1 101 102 BCL BCL . QA 8 BCL 4 1 102 101 BCL BCL . RA 8 BCL 5 1 101 101 BCL BCL . SA 8 BCL 6 1 101 102 BCL BCL . TA 8 BCL 6 1 102 101 BCL BCL . UA 8 BCL 7 1 101 101 BCL BCL . VA 8 BCL 8 1 101 102 BCL BCL . WA 8 BCL 8 1 102 101 BCL BCL . XA 9 KGD 9 1 101 102 KGD KGD . YA 8 BCL 9 1 102 103 BCL BCL . ZA 8 BCL A 1 101 101 BCL BCL . AB 8 BCL B 1 101 102 BCL BCL . BB 8 BCL B 1 102 101 BCL BCL . CB 8 BCL D 1 101 101 BCL BCL . DB 9 KGD D 1 102 103 KGD KGD . EB 8 BCL E 1 101 102 BCL BCL . FB 8 BCL E 1 102 101 BCL BCL . GB 8 BCL F 1 101 101 BCL BCL . HB 8 BCL G 1 101 102 BCL BCL . IB 8 BCL G 1 102 101 BCL BCL . JB 8 BCL H 1 101 101 BCL BCL . KB 8 BCL I 1 101 102 BCL BCL . LB 8 BCL I 1 102 101 BCL BCL . MB 9 KGD I 1 103 102 KGD KGD . NB 8 BCL J 1 101 101 BCL BCL . OB 9 KGD J 1 102 103 KGD KGD . PB 8 BCL K 1 101 102 BCL BCL . QB 8 BCL K 1 102 101 BCL BCL . RB 8 BCL L 1 401 401 BCL BCL . SB 10 BPH L 1 402 402 BPH BPH . TB 11 MQE L 1 403 403 MQE MQE . UB 10 BPH L 1 404 404 BPH BPH . VB 10 BPH L 1 405 405 BPH BPH . WB 8 BCL M 1 1001 1001 BCL BCL . XB 11 MQE M 1 1002 1002 MQE MQE . YB 11 MQE M 1 1003 1014 MQE MQE . ZB 12 FE M 1 1004 1003 FE FE . AC 8 BCL M 1 1005 1004 BCL BCL . BC 13 PGV M 1 1006 2 PGV PGV . CC 13 PGV M 1 1007 3 PGV PGV . DC 13 PGV M 1 1008 7 PGV PGV . EC 8 BCL N 1 101 101 BCL BCL . FC 9 KGD N 1 102 103 KGD KGD . GC 8 BCL O 1 101 102 BCL BCL . HC 8 BCL O 1 102 101 BCL BCL . IC 8 BCL P 1 101 101 BCL BCL . JC 8 BCL Q 1 101 102 BCL BCL . KC 8 BCL Q 1 102 101 BCL BCL . LC 8 BCL R 1 101 101 BCL BCL . MC 8 BCL S 1 101 102 BCL BCL . NC 8 BCL S 1 102 101 BCL BCL . OC 8 BCL T 1 101 101 BCL BCL . PC 8 BCL U 1 101 102 BCL BCL . QC 8 BCL U 1 102 101 BCL BCL . RC 8 BCL V 1 101 101 BCL BCL . SC 8 BCL W 1 101 101 BCL BCL . TC 8 BCL W 1 102 102 BCL BCL . UC 14 HEM C 1 501 501 HEM HEM . VC 14 HEM C 1 502 502 HEM HEM . WC 14 HEM C 1 503 503 HEM HEM . XC 14 HEM C 1 504 504 HEM HEM . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id ZB _atom_site.label_entity_id 12 _atom_site.Cartn_x 126.599 _atom_site.Cartn_y 121.272 _atom_site.Cartn_z 134.481 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 53.63 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE _atom_site.auth_seq_id 1004 _atom_site.auth_asym_id M _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #