data_8HK2 # _model_server_result.job_id RSM_Ct8lbqE2hiXty6XsDg _model_server_result.datetime_utc '2024-10-11 00:22:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hk2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":506}' # _entry.id 8HK2 # _exptl.entry_id 8HK2 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 256.424 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 L N N ? 8 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 126 C CYS 121 1_555 C SG CYS 154 C CYS 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? disulf ? disulf2 D SG CYS 22 D CYS 22 1_555 D SG CYS 49 D CYS 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 D SG CYS 23 D CYS 23 1_555 D SG CYS 56 D CYS 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 335 n n C1 O2 PLM doub 336 n n C1 C2 PLM sing 337 n n O1 H PLM sing 338 n n C2 C3 PLM sing 339 n n C2 H21 PLM sing 340 n n C2 H22 PLM sing 341 n n C3 C4 PLM sing 342 n n C3 H31 PLM sing 343 n n C3 H32 PLM sing 344 n n C4 C5 PLM sing 345 n n C4 H41 PLM sing 346 n n C4 H42 PLM sing 347 n n C5 C6 PLM sing 348 n n C5 H51 PLM sing 349 n n C5 H52 PLM sing 350 n n C6 C7 PLM sing 351 n n C6 H61 PLM sing 352 n n C6 H62 PLM sing 353 n n C7 C8 PLM sing 354 n n C7 H71 PLM sing 355 n n C7 H72 PLM sing 356 n n C8 C9 PLM sing 357 n n C8 H81 PLM sing 358 n n C8 H82 PLM sing 359 n n C9 CA PLM sing 360 n n C9 H91 PLM sing 361 n n C9 H92 PLM sing 362 n n CA CB PLM sing 363 n n CA HA1 PLM sing 364 n n CA HA2 PLM sing 365 n n CB CC PLM sing 366 n n CB HB1 PLM sing 367 n n CB HB2 PLM sing 368 n n CC CD PLM sing 369 n n CC HC1 PLM sing 370 n n CC HC2 PLM sing 371 n n CD CE PLM sing 372 n n CD HD1 PLM sing 373 n n CD HD2 PLM sing 374 n n CE CF PLM sing 375 n n CE HE1 PLM sing 376 n n CE HE2 PLM sing 377 n n CF CG PLM sing 378 n n CF HF1 PLM sing 379 n n CF HF2 PLM sing 380 n n CG HG1 PLM sing 381 n n CG HG2 PLM sing 382 n n CG HG3 PLM sing 383 n n # _atom_sites.entry_id 8HK2 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 7 CLR A 1 501 611 CLR CLR . H 7 CLR A 1 502 612 CLR CLR . I 7 CLR A 1 503 614 CLR CLR . J 7 CLR A 1 504 615 CLR CLR . K 7 CLR A 1 505 616 CLR CLR . L 8 PLM A 1 506 617 PLM PLM . M 8 PLM A 1 507 618 PLM PLM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . L 8 86.73 100.916 107.546 1 58.26 ? C1 PLM 506 A 1 HETATM 2 O O1 PLM . . . L 8 85.875 100.442 106.753 1 58.26 ? O1 PLM 506 A 1 HETATM 3 O O2 PLM . . . L 8 86.797 102.159 107.731 1 58.26 ? O2 PLM 506 A 1 HETATM 4 C C2 PLM . . . L 8 87.685 99.984 108.288 1 58.26 ? C2 PLM 506 A 1 HETATM 5 C C3 PLM . . . L 8 88.161 100.577 109.612 1 58.26 ? C3 PLM 506 A 1 HETATM 6 C C4 PLM . . . L 8 89.109 99.639 110.353 1 58.26 ? C4 PLM 506 A 1 HETATM 7 C C5 PLM . . . L 8 89.882 100.354 111.457 1 58.26 ? C5 PLM 506 A 1 HETATM 8 C C6 PLM . . . L 8 91.031 99.503 111.989 1 58.26 ? C6 PLM 506 A 1 HETATM 9 C C7 PLM . . . L 8 92.061 100.334 112.75 1 58.26 ? C7 PLM 506 A 1 HETATM 10 C C8 PLM . . . L 8 93.357 99.563 112.98 1 58.26 ? C8 PLM 506 A 1 HETATM 11 C C9 PLM . . . L 8 94.383 100.378 113.76 1 58.26 ? C9 PLM 506 A 1 HETATM 12 C CA PLM . . . L 8 95.706 99.634 113.924 1 58.26 ? CA PLM 506 A 1 HETATM 13 C CB PLM . . . L 8 96.776 100.511 114.568 1 58.26 ? CB PLM 506 A 1 HETATM 14 C CC PLM . . . L 8 98.129 99.811 114.66 1 58.26 ? CC PLM 506 A 1 HETATM 15 C CD PLM . . . L 8 98.082 98.604 115.59 1 58.26 ? CD PLM 506 A 1 HETATM 16 C CE PLM . . . L 8 99.223 98.619 116.603 1 58.26 ? CE PLM 506 A 1 HETATM 17 C CF PLM . . . L 8 98.917 97.75 117.819 1 58.26 ? CF PLM 506 A 1 HETATM 18 C CG PLM . . . L 8 99.724 98.17 119.044 1 58.26 ? CG PLM 506 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 18 #