data_8HKN
#
_model_server_result.job_id            WPHdajma1RDpwyXrROVzVw 
_model_server_result.datetime_utc      '2024-10-31 07:19:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8hkn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":601}' 
#
_entry.id    8HKN 
#
_exptl.entry_id    8HKN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.03 
_cell.angle_gamma         90 
_cell.entry_id            8HKN 
_cell.length_a            41.01 
_cell.length_b            85.584 
_cell.length_c            95.413 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8HKN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 183 n n 
C1 C2 GOL sing 184 n n 
C1 H11 GOL sing 185 n n 
C1 H12 GOL sing 186 n n 
O1 HO1 GOL sing 187 n n 
C2 O2 GOL sing 188 n n 
C2 C3 GOL sing 189 n n 
C2 H2 GOL sing 190 n n 
O2 HO2 GOL sing 191 n n 
C3 O3 GOL sing 192 n n 
C3 H31 GOL sing 193 n n 
C3 H32 GOL sing 194 n n 
O3 HO3 GOL sing 195 n n 
#
_atom_sites.entry_id                     8HKN 
_atom_sites.fract_transf_matrix[1][1]    0.024384 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000013 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011684 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010481 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GOL B 1 601 601 GOL GLO . 
D 3 25I B 1 602 1 25I LIG . 
E 2 GOL A 1 601 601 GOL GLO . 
F 3 25I A 1 602 2 25I LIG . 
G 4 HOH B 1 701 115 HOH HOH . 
G 4 HOH B 2 702 117 HOH HOH . 
G 4 HOH B 3 703 229 HOH HOH . 
G 4 HOH B 4 704 213 HOH HOH . 
G 4 HOH B 5 705 19 HOH HOH . 
G 4 HOH B 6 706 180 HOH HOH . 
G 4 HOH B 7 707 135 HOH HOH . 
G 4 HOH B 8 708 29 HOH HOH . 
G 4 HOH B 9 709 113 HOH HOH . 
G 4 HOH B 10 710 7 HOH HOH . 
G 4 HOH B 11 711 191 HOH HOH . 
G 4 HOH B 12 712 151 HOH HOH . 
G 4 HOH B 13 713 10 HOH HOH . 
G 4 HOH B 14 714 193 HOH HOH . 
G 4 HOH B 15 715 124 HOH HOH . 
G 4 HOH B 16 716 111 HOH HOH . 
G 4 HOH B 17 717 12 HOH HOH . 
G 4 HOH B 18 718 185 HOH HOH . 
G 4 HOH B 19 719 23 HOH HOH . 
G 4 HOH B 20 720 33 HOH HOH . 
G 4 HOH B 21 721 45 HOH HOH . 
G 4 HOH B 22 722 138 HOH HOH . 
G 4 HOH B 23 723 2 HOH HOH . 
G 4 HOH B 24 724 141 HOH HOH . 
G 4 HOH B 25 725 224 HOH HOH . 
G 4 HOH B 26 726 199 HOH HOH . 
G 4 HOH B 27 727 173 HOH HOH . 
G 4 HOH B 28 728 90 HOH HOH . 
G 4 HOH B 29 729 61 HOH HOH . 
G 4 HOH B 30 730 25 HOH HOH . 
G 4 HOH B 31 731 58 HOH HOH . 
G 4 HOH B 32 732 21 HOH HOH . 
G 4 HOH B 33 733 1 HOH HOH . 
G 4 HOH B 34 734 210 HOH HOH . 
G 4 HOH B 35 735 74 HOH HOH . 
G 4 HOH B 36 736 128 HOH HOH . 
G 4 HOH B 37 737 206 HOH HOH . 
G 4 HOH B 38 738 13 HOH HOH . 
G 4 HOH B 39 739 169 HOH HOH . 
G 4 HOH B 40 740 183 HOH HOH . 
G 4 HOH B 41 741 178 HOH HOH . 
G 4 HOH B 42 742 205 HOH HOH . 
G 4 HOH B 43 743 42 HOH HOH . 
G 4 HOH B 44 744 63 HOH HOH . 
G 4 HOH B 45 745 143 HOH HOH . 
G 4 HOH B 46 746 131 HOH HOH . 
G 4 HOH B 47 747 225 HOH HOH . 
G 4 HOH B 48 748 8 HOH HOH . 
G 4 HOH B 49 749 82 HOH HOH . 
G 4 HOH B 50 750 51 HOH HOH . 
G 4 HOH B 51 751 152 HOH HOH . 
G 4 HOH B 52 752 40 HOH HOH . 
G 4 HOH B 53 753 194 HOH HOH . 
G 4 HOH B 54 754 200 HOH HOH . 
G 4 HOH B 55 755 118 HOH HOH . 
G 4 HOH B 56 756 76 HOH HOH . 
G 4 HOH B 57 757 34 HOH HOH . 
G 4 HOH B 58 758 41 HOH HOH . 
G 4 HOH B 59 759 163 HOH HOH . 
G 4 HOH B 60 760 36 HOH HOH . 
G 4 HOH B 61 761 35 HOH HOH . 
G 4 HOH B 62 762 109 HOH HOH . 
G 4 HOH B 63 763 186 HOH HOH . 
G 4 HOH B 64 764 4 HOH HOH . 
G 4 HOH B 65 765 168 HOH HOH . 
G 4 HOH B 66 766 103 HOH HOH . 
G 4 HOH B 67 767 78 HOH HOH . 
G 4 HOH B 68 768 147 HOH HOH . 
G 4 HOH B 69 769 204 HOH HOH . 
G 4 HOH B 70 770 92 HOH HOH . 
G 4 HOH B 71 771 37 HOH HOH . 
G 4 HOH B 72 772 120 HOH HOH . 
G 4 HOH B 73 773 95 HOH HOH . 
G 4 HOH B 74 774 132 HOH HOH . 
G 4 HOH B 75 775 177 HOH HOH . 
G 4 HOH B 76 776 31 HOH HOH . 
G 4 HOH B 77 777 20 HOH HOH . 
G 4 HOH B 78 778 192 HOH HOH . 
G 4 HOH B 79 779 112 HOH HOH . 
G 4 HOH B 80 780 86 HOH HOH . 
G 4 HOH B 81 781 67 HOH HOH . 
G 4 HOH B 82 782 126 HOH HOH . 
G 4 HOH B 83 783 97 HOH HOH . 
G 4 HOH B 84 784 226 HOH HOH . 
G 4 HOH B 85 785 93 HOH HOH . 
G 4 HOH B 86 786 157 HOH HOH . 
G 4 HOH B 87 787 134 HOH HOH . 
G 4 HOH B 88 788 181 HOH HOH . 
G 4 HOH B 89 789 68 HOH HOH . 
G 4 HOH B 90 790 77 HOH HOH . 
G 4 HOH B 91 791 18 HOH HOH . 
G 4 HOH B 92 792 140 HOH HOH . 
G 4 HOH B 93 793 142 HOH HOH . 
G 4 HOH B 94 794 80 HOH HOH . 
G 4 HOH B 95 795 125 HOH HOH . 
G 4 HOH B 96 796 158 HOH HOH . 
G 4 HOH B 97 797 114 HOH HOH . 
G 4 HOH B 98 798 198 HOH HOH . 
G 4 HOH B 99 799 219 HOH HOH . 
G 4 HOH B 100 800 96 HOH HOH . 
G 4 HOH B 101 801 223 HOH HOH . 
G 4 HOH B 102 802 50 HOH HOH . 
G 4 HOH B 103 803 195 HOH HOH . 
G 4 HOH B 104 804 69 HOH HOH . 
G 4 HOH B 105 805 133 HOH HOH . 
G 4 HOH B 106 806 53 HOH HOH . 
G 4 HOH B 107 807 91 HOH HOH . 
G 4 HOH B 108 808 130 HOH HOH . 
G 4 HOH B 109 809 231 HOH HOH . 
G 4 HOH B 110 810 214 HOH HOH . 
H 4 HOH A 1 701 56 HOH HOH . 
H 4 HOH A 2 702 159 HOH HOH . 
H 4 HOH A 3 703 116 HOH HOH . 
H 4 HOH A 4 704 32 HOH HOH . 
H 4 HOH A 5 705 137 HOH HOH . 
H 4 HOH A 6 706 43 HOH HOH . 
H 4 HOH A 7 707 9 HOH HOH . 
H 4 HOH A 8 708 52 HOH HOH . 
H 4 HOH A 9 709 160 HOH HOH . 
H 4 HOH A 10 710 75 HOH HOH . 
H 4 HOH A 11 711 171 HOH HOH . 
H 4 HOH A 12 712 166 HOH HOH . 
H 4 HOH A 13 713 83 HOH HOH . 
H 4 HOH A 14 714 154 HOH HOH . 
H 4 HOH A 15 715 176 HOH HOH . 
H 4 HOH A 16 716 102 HOH HOH . 
H 4 HOH A 17 717 46 HOH HOH . 
H 4 HOH A 18 718 11 HOH HOH . 
H 4 HOH A 19 719 24 HOH HOH . 
H 4 HOH A 20 720 47 HOH HOH . 
H 4 HOH A 21 721 87 HOH HOH . 
H 4 HOH A 22 722 217 HOH HOH . 
H 4 HOH A 23 723 64 HOH HOH . 
H 4 HOH A 24 724 3 HOH HOH . 
H 4 HOH A 25 725 170 HOH HOH . 
H 4 HOH A 26 726 150 HOH HOH . 
H 4 HOH A 27 727 153 HOH HOH . 
H 4 HOH A 28 728 222 HOH HOH . 
H 4 HOH A 29 729 59 HOH HOH . 
H 4 HOH A 30 730 44 HOH HOH . 
H 4 HOH A 31 731 148 HOH HOH . 
H 4 HOH A 32 732 146 HOH HOH . 
H 4 HOH A 33 733 65 HOH HOH . 
H 4 HOH A 34 734 30 HOH HOH . 
H 4 HOH A 35 735 6 HOH HOH . 
H 4 HOH A 36 736 164 HOH HOH . 
H 4 HOH A 37 737 108 HOH HOH . 
H 4 HOH A 38 738 73 HOH HOH . 
H 4 HOH A 39 739 207 HOH HOH . 
H 4 HOH A 40 740 55 HOH HOH . 
H 4 HOH A 41 741 17 HOH HOH . 
H 4 HOH A 42 742 16 HOH HOH . 
H 4 HOH A 43 743 232 HOH HOH . 
H 4 HOH A 44 744 136 HOH HOH . 
H 4 HOH A 45 745 184 HOH HOH . 
H 4 HOH A 46 746 228 HOH HOH . 
H 4 HOH A 47 747 119 HOH HOH . 
H 4 HOH A 48 748 39 HOH HOH . 
H 4 HOH A 49 749 15 HOH HOH . 
H 4 HOH A 50 750 79 HOH HOH . 
H 4 HOH A 51 751 22 HOH HOH . 
H 4 HOH A 52 752 26 HOH HOH . 
H 4 HOH A 53 753 227 HOH HOH . 
H 4 HOH A 54 754 179 HOH HOH . 
H 4 HOH A 55 755 57 HOH HOH . 
H 4 HOH A 56 756 98 HOH HOH . 
H 4 HOH A 57 757 14 HOH HOH . 
H 4 HOH A 58 758 189 HOH HOH . 
H 4 HOH A 59 759 71 HOH HOH . 
H 4 HOH A 60 760 28 HOH HOH . 
H 4 HOH A 61 761 122 HOH HOH . 
H 4 HOH A 62 762 84 HOH HOH . 
H 4 HOH A 63 763 5 HOH HOH . 
H 4 HOH A 64 764 144 HOH HOH . 
H 4 HOH A 65 765 72 HOH HOH . 
H 4 HOH A 66 766 139 HOH HOH . 
H 4 HOH A 67 767 66 HOH HOH . 
H 4 HOH A 68 768 221 HOH HOH . 
H 4 HOH A 69 769 48 HOH HOH . 
H 4 HOH A 70 770 149 HOH HOH . 
H 4 HOH A 71 771 188 HOH HOH . 
H 4 HOH A 72 772 209 HOH HOH . 
H 4 HOH A 73 773 162 HOH HOH . 
H 4 HOH A 74 774 99 HOH HOH . 
H 4 HOH A 75 775 161 HOH HOH . 
H 4 HOH A 76 776 123 HOH HOH . 
H 4 HOH A 77 777 38 HOH HOH . 
H 4 HOH A 78 778 201 HOH HOH . 
H 4 HOH A 79 779 85 HOH HOH . 
H 4 HOH A 80 780 27 HOH HOH . 
H 4 HOH A 81 781 110 HOH HOH . 
H 4 HOH A 82 782 101 HOH HOH . 
H 4 HOH A 83 783 129 HOH HOH . 
H 4 HOH A 84 784 104 HOH HOH . 
H 4 HOH A 85 785 100 HOH HOH . 
H 4 HOH A 86 786 60 HOH HOH . 
H 4 HOH A 87 787 62 HOH HOH . 
H 4 HOH A 88 788 155 HOH HOH . 
H 4 HOH A 89 789 208 HOH HOH . 
H 4 HOH A 90 790 174 HOH HOH . 
H 4 HOH A 91 791 218 HOH HOH . 
H 4 HOH A 92 792 215 HOH HOH . 
H 4 HOH A 93 793 54 HOH HOH . 
H 4 HOH A 94 794 107 HOH HOH . 
H 4 HOH A 95 795 190 HOH HOH . 
H 4 HOH A 96 796 220 HOH HOH . 
H 4 HOH A 97 797 203 HOH HOH . 
H 4 HOH A 98 798 167 HOH HOH . 
H 4 HOH A 99 799 88 HOH HOH . 
H 4 HOH A 100 800 105 HOH HOH . 
H 4 HOH A 101 801 49 HOH HOH . 
H 4 HOH A 102 802 81 HOH HOH . 
H 4 HOH A 103 803 175 HOH HOH . 
H 4 HOH A 104 804 202 HOH HOH . 
H 4 HOH A 105 805 211 HOH HOH . 
H 4 HOH A 106 806 182 HOH HOH . 
H 4 HOH A 107 807 94 HOH HOH . 
H 4 HOH A 108 808 127 HOH HOH . 
H 4 HOH A 109 809 70 HOH HOH . 
H 4 HOH A 110 810 121 HOH HOH . 
H 4 HOH A 111 811 216 HOH HOH . 
H 4 HOH A 112 812 197 HOH HOH . 
H 4 HOH A 113 813 187 HOH HOH . 
H 4 HOH A 114 814 106 HOH HOH . 
H 4 HOH A 115 815 145 HOH HOH . 
H 4 HOH A 116 816 156 HOH HOH . 
H 4 HOH A 117 817 212 HOH HOH . 
H 4 HOH A 118 818 196 HOH HOH . 
H 4 HOH A 119 819 165 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 2 12.079 0.905 42.946 1 60.7 ? C1 GOL 601 B 1 
HETATM 2 O O1 GOL . . . C 2 10.72 0.875 43.432 1 53.66 ? O1 GOL 601 B 1 
HETATM 3 C C2 GOL . . . C 2 12.078 1.427 41.536 1 60.04 ? C2 GOL 601 B 1 
HETATM 4 O O2 GOL . . . C 2 11.562 0.326 40.671 1 58.23 ? O2 GOL 601 B 1 
HETATM 5 C C3 GOL . . . C 2 13.417 1.823 40.974 1 62.12 ? C3 GOL 601 B 1 
HETATM 6 O O3 GOL . . . C 2 14.272 2.584 41.949 1 56.9 ? O3 GOL 601 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#