data_8HL8 # _model_server_result.job_id 69aMpNKkIBdcpF_mtVsmeQ _model_server_result.datetime_utc '2024-11-27 08:45:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hl8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 8HL8 # _exptl.entry_id 8HL8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8HL8 _cell.length_a 98.605 _cell.length_b 162.405 _cell.length_c 116.206 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HL8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1,2 B,D,F 1 3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 98.605 0 58.103 3 'crystal symmetry operation' 5_545 x+1/2,y-1/2,z 1 0 0 0 1 0 0 0 1 49.3025 -81.2025 0 4 'crystal symmetry operation' 7_545 -x+1/2,y-1/2,-z+1/2 -1 0 0 0 1 0 0 0 -1 49.3025 -81.2025 58.103 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 112 A ASP 111 1_555 C MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc2 A NE2 HIS 288 A HIS 287 1_555 C MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc3 B OD2 ASP 112 C ASP 111 1_555 D MN MN . C MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc4 B NE2 HIS 288 C HIS 287 1_555 D MN MN . C MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8HL8 _atom_sites.fract_transf_matrix[1][1] 0.010141 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006157 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008605 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MN A 1 401 1 MN MN . D 2 MN C 1 401 2 MN MN . E 3 HOH A 1 501 99 HOH HOH . E 3 HOH A 2 502 115 HOH HOH . E 3 HOH A 3 503 53 HOH HOH . E 3 HOH A 4 504 92 HOH HOH . E 3 HOH A 5 505 150 HOH HOH . E 3 HOH A 6 506 1 HOH HOH . E 3 HOH A 7 507 5 HOH HOH . E 3 HOH A 8 508 148 HOH HOH . E 3 HOH A 9 509 77 HOH HOH . E 3 HOH A 10 510 68 HOH HOH . E 3 HOH A 11 511 22 HOH HOH . E 3 HOH A 12 512 61 HOH HOH . E 3 HOH A 13 513 28 HOH HOH . E 3 HOH A 14 514 31 HOH HOH . E 3 HOH A 15 515 7 HOH HOH . E 3 HOH A 16 516 25 HOH HOH . E 3 HOH A 17 517 24 HOH HOH . E 3 HOH A 18 518 3 HOH HOH . E 3 HOH A 19 519 138 HOH HOH . E 3 HOH A 20 520 104 HOH HOH . E 3 HOH A 21 521 127 HOH HOH . E 3 HOH A 22 522 76 HOH HOH . E 3 HOH A 23 523 6 HOH HOH . E 3 HOH A 24 524 80 HOH HOH . E 3 HOH A 25 525 65 HOH HOH . E 3 HOH A 26 526 47 HOH HOH . E 3 HOH A 27 527 75 HOH HOH . E 3 HOH A 28 528 100 HOH HOH . E 3 HOH A 29 529 59 HOH HOH . E 3 HOH A 30 530 20 HOH HOH . E 3 HOH A 31 531 69 HOH HOH . E 3 HOH A 32 532 45 HOH HOH . E 3 HOH A 33 533 94 HOH HOH . E 3 HOH A 34 534 27 HOH HOH . E 3 HOH A 35 535 26 HOH HOH . E 3 HOH A 36 536 123 HOH HOH . E 3 HOH A 37 537 86 HOH HOH . E 3 HOH A 38 538 36 HOH HOH . E 3 HOH A 39 539 17 HOH HOH . E 3 HOH A 40 540 103 HOH HOH . E 3 HOH A 41 541 139 HOH HOH . E 3 HOH A 42 542 46 HOH HOH . E 3 HOH A 43 543 19 HOH HOH . E 3 HOH A 44 544 118 HOH HOH . E 3 HOH A 45 545 70 HOH HOH . E 3 HOH A 46 546 143 HOH HOH . E 3 HOH A 47 547 90 HOH HOH . E 3 HOH A 48 548 146 HOH HOH . E 3 HOH A 49 549 32 HOH HOH . E 3 HOH A 50 550 142 HOH HOH . E 3 HOH A 51 551 74 HOH HOH . E 3 HOH A 52 552 136 HOH HOH . E 3 HOH A 53 553 62 HOH HOH . E 3 HOH A 54 554 108 HOH HOH . E 3 HOH A 55 555 95 HOH HOH . E 3 HOH A 56 556 57 HOH HOH . E 3 HOH A 57 557 41 HOH HOH . E 3 HOH A 58 558 133 HOH HOH . E 3 HOH A 59 559 140 HOH HOH . E 3 HOH A 60 560 114 HOH HOH . E 3 HOH A 61 561 35 HOH HOH . E 3 HOH A 62 562 54 HOH HOH . E 3 HOH A 63 563 135 HOH HOH . E 3 HOH A 64 564 23 HOH HOH . F 3 HOH C 1 501 38 HOH HOH . F 3 HOH C 2 502 2 HOH HOH . F 3 HOH C 3 503 15 HOH HOH . F 3 HOH C 4 504 132 HOH HOH . F 3 HOH C 5 505 82 HOH HOH . F 3 HOH C 6 506 4 HOH HOH . F 3 HOH C 7 507 63 HOH HOH . F 3 HOH C 8 508 12 HOH HOH . F 3 HOH C 9 509 87 HOH HOH . F 3 HOH C 10 510 111 HOH HOH . F 3 HOH C 11 511 97 HOH HOH . F 3 HOH C 12 512 52 HOH HOH . F 3 HOH C 13 513 116 HOH HOH . F 3 HOH C 14 514 40 HOH HOH . F 3 HOH C 15 515 50 HOH HOH . F 3 HOH C 16 516 11 HOH HOH . F 3 HOH C 17 517 119 HOH HOH . F 3 HOH C 18 518 33 HOH HOH . F 3 HOH C 19 519 10 HOH HOH . F 3 HOH C 20 520 29 HOH HOH . F 3 HOH C 21 521 49 HOH HOH . F 3 HOH C 22 522 8 HOH HOH . F 3 HOH C 23 523 30 HOH HOH . F 3 HOH C 24 524 129 HOH HOH . F 3 HOH C 25 525 42 HOH HOH . F 3 HOH C 26 526 81 HOH HOH . F 3 HOH C 27 527 141 HOH HOH . F 3 HOH C 28 528 112 HOH HOH . F 3 HOH C 29 529 13 HOH HOH . F 3 HOH C 30 530 145 HOH HOH . F 3 HOH C 31 531 83 HOH HOH . F 3 HOH C 32 532 149 HOH HOH . F 3 HOH C 33 533 58 HOH HOH . F 3 HOH C 34 534 51 HOH HOH . F 3 HOH C 35 535 120 HOH HOH . F 3 HOH C 36 536 66 HOH HOH . F 3 HOH C 37 537 105 HOH HOH . F 3 HOH C 38 538 64 HOH HOH . F 3 HOH C 39 539 72 HOH HOH . F 3 HOH C 40 540 34 HOH HOH . F 3 HOH C 41 541 122 HOH HOH . F 3 HOH C 42 542 106 HOH HOH . F 3 HOH C 43 543 60 HOH HOH . F 3 HOH C 44 544 43 HOH HOH . F 3 HOH C 45 545 113 HOH HOH . F 3 HOH C 46 546 85 HOH HOH . F 3 HOH C 47 547 137 HOH HOH . F 3 HOH C 48 548 147 HOH HOH . F 3 HOH C 49 549 89 HOH HOH . F 3 HOH C 50 550 78 HOH HOH . F 3 HOH C 51 551 93 HOH HOH . F 3 HOH C 52 552 79 HOH HOH . F 3 HOH C 53 553 101 HOH HOH . F 3 HOH C 54 554 18 HOH HOH . F 3 HOH C 55 555 84 HOH HOH . F 3 HOH C 56 556 130 HOH HOH . F 3 HOH C 57 557 107 HOH HOH . F 3 HOH C 58 558 48 HOH HOH . F 3 HOH C 59 559 117 HOH HOH . F 3 HOH C 60 560 56 HOH HOH . F 3 HOH C 61 561 131 HOH HOH . F 3 HOH C 62 562 91 HOH HOH . F 3 HOH C 63 563 110 HOH HOH . F 3 HOH C 64 564 67 HOH HOH . F 3 HOH C 65 565 55 HOH HOH . F 3 HOH C 66 566 21 HOH HOH . F 3 HOH C 67 567 37 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 25.989 _atom_site.Cartn_y 3.994 _atom_site.Cartn_z 12.734 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 80.39 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #