data_8HMP # _model_server_result.job_id KikCox0JQD65igRQhAa65A _model_server_result.datetime_utc '2024-12-27 01:16:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hmp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 8HMP # _exptl.entry_id 8HMP _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 489.51 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(2-hydroxyethyl)-5-(hydroxymethyl)-3-methyl-1-[2-[[3-(trifluoromethyl)phenyl]methyl]-1-benzothiophen-7-yl]pyrazole-4-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8HMP _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HMP _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 45 N CYS 22 1_555 C SG CYS 119 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf2 C SG CYS 122 N CYS 99 1_555 C SG CYS 130 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 D SG CYS 27 R CYS 27 1_555 D SG CYS 40 R CYS 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 D SG CYS 114 R CYS 114 1_555 D SG CYS 193 R CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? # _chem_comp.formula 'C24 H22 F3 N3 O3 S' _chem_comp.formula_weight 489.51 _chem_comp.id EN6 _chem_comp.mon_nstd_flag . _chem_comp.name N-(2-hydroxyethyl)-5-(hydroxymethyl)-3-methyl-1-[2-[[3-(trifluoromethyl)phenyl]methyl]-1-benzothiophen-7-yl]pyrazole-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C23 C24 EN6 sing 83 n n C23 N3 EN6 sing 84 n n C24 O3 EN6 sing 85 n n N3 C22 EN6 sing 86 n n O1 C21 EN6 sing 87 n n C21 C17 EN6 sing 88 n n C22 O2 EN6 doub 89 n n C22 C18 EN6 sing 90 n n C17 C18 EN6 doub 91 n y C17 N1 EN6 sing 92 n y C2 C3 EN6 doub 93 n y C2 C1 EN6 sing 94 n y C3 C4 EN6 sing 95 n y C18 C19 EN6 sing 96 n y N1 C1 EN6 sing 97 n n N1 N2 EN6 sing 98 n y C1 C6 EN6 doub 99 n y C4 C5 EN6 doub 100 n y C19 N2 EN6 doub 101 n y C19 C20 EN6 sing 102 n n C6 C5 EN6 sing 103 n y C6 S1 EN6 sing 104 n y C5 C7 EN6 sing 105 n y C7 C8 EN6 doub 106 n y S1 C8 EN6 sing 107 n y C8 C9 EN6 sing 108 n n C9 C10 EN6 sing 109 n n C10 C15 EN6 doub 110 n y C10 C11 EN6 sing 111 n y C15 C14 EN6 sing 112 n y C11 C12 EN6 doub 113 n y F1 C16 EN6 sing 114 n n C14 C16 EN6 sing 115 n n C14 C13 EN6 doub 116 n y C12 C13 EN6 sing 117 n y C16 F2 EN6 sing 118 n n C16 F3 EN6 sing 119 n n N3 H1 EN6 sing 120 n n C4 H2 EN6 sing 121 n n C7 H3 EN6 sing 122 n n C13 H4 EN6 sing 123 n n C15 H5 EN6 sing 124 n n C20 H6 EN6 sing 125 n n C20 H7 EN6 sing 126 n n C20 H8 EN6 sing 127 n n C21 H9 EN6 sing 128 n n C21 H10 EN6 sing 129 n n C24 H11 EN6 sing 130 n n C24 H12 EN6 sing 131 n n C2 H13 EN6 sing 132 n n C3 H14 EN6 sing 133 n n C9 H15 EN6 sing 134 n n C9 H16 EN6 sing 135 n n C11 H17 EN6 sing 136 n n C12 H18 EN6 sing 137 n n O1 H19 EN6 sing 138 n n C23 H20 EN6 sing 139 n n C23 H21 EN6 sing 140 n n O3 H22 EN6 sing 141 n n # _atom_sites.entry_id 8HMP _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id F _pdbx_nonpoly_scheme.entity_id 6 _pdbx_nonpoly_scheme.mon_id EN6 _pdbx_nonpoly_scheme.pdb_strand_id R _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 401 _pdbx_nonpoly_scheme.pdb_mon_id EN6 _pdbx_nonpoly_scheme.auth_mon_id EN6 _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EN6 . . . F 6 119.095 133.371 168.058 1 94.15 ? N1 EN6 401 R 1 HETATM 2 N N3 EN6 . . . F 6 114.712 131.311 168.667 1 94.15 ? N3 EN6 401 R 1 HETATM 3 C C4 EN6 . . . F 6 122.909 135.498 168.594 1 94.15 ? C4 EN6 401 R 1 HETATM 4 C C5 EN6 . . . F 6 122.606 134.83 167.409 1 94.15 ? C5 EN6 401 R 1 HETATM 5 C C6 EN6 . . . F 6 121.384 134.156 167.254 1 94.15 ? C6 EN6 401 R 1 HETATM 6 C C7 EN6 . . . F 6 123.482 134.759 166.248 1 94.15 ? C7 EN6 401 R 1 HETATM 7 C C8 EN6 . . . F 6 122.987 134.059 165.209 1 94.15 ? C8 EN6 401 R 1 HETATM 8 C C10 EN6 . . . F 6 122.904 133.958 162.582 1 94.15 ? C10 EN6 401 R 1 HETATM 9 C C13 EN6 . . . F 6 121.524 134.308 160.132 1 94.15 ? C13 EN6 401 R 1 HETATM 10 C C15 EN6 . . . F 6 122.573 132.873 161.767 1 94.15 ? C15 EN6 401 R 1 HETATM 11 C C17 EN6 . . . F 6 118.385 132.479 168.881 1 94.15 ? C17 EN6 401 R 1 HETATM 12 C C20 EN6 . . . F 6 116.398 132.701 165.74 1 94.15 ? C20 EN6 401 R 1 HETATM 13 C C21 EN6 . . . F 6 118.778 132.046 170.265 1 94.15 ? C21 EN6 401 R 1 HETATM 14 C C22 EN6 . . . F 6 116.137 131.092 168.685 1 94.15 ? C22 EN6 401 R 1 HETATM 15 C C24 EN6 . . . F 6 114.235 133.844 168.711 1 94.15 ? C24 EN6 401 R 1 HETATM 16 C C1 EN6 . . . F 6 120.4 134.104 168.258 1 94.15 ? C1 EN6 401 R 1 HETATM 17 C C2 EN6 . . . F 6 120.729 134.791 169.439 1 94.15 ? C2 EN6 401 R 1 HETATM 18 C C3 EN6 . . . F 6 121.961 135.466 169.598 1 94.15 ? C3 EN6 401 R 1 HETATM 19 S S1 EN6 . . . F 6 121.412 133.469 165.649 1 94.15 ? S1 EN6 401 R 1 HETATM 20 C C9 EN6 . . . F 6 123.636 133.807 163.903 1 94.15 ? C9 EN6 401 R 1 HETATM 21 C C11 EN6 . . . F 6 122.518 135.216 162.132 1 94.15 ? C11 EN6 401 R 1 HETATM 22 C C12 EN6 . . . F 6 121.845 135.393 160.929 1 94.15 ? C12 EN6 401 R 1 HETATM 23 C C14 EN6 . . . F 6 121.895 133.048 160.563 1 94.15 ? C14 EN6 401 R 1 HETATM 24 C C16 EN6 . . . F 6 121.537 131.846 159.669 1 94.15 ? C16 EN6 401 R 1 HETATM 25 F F1 EN6 . . . F 6 120.611 131.062 160.167 1 94.15 ? F1 EN6 401 R 1 HETATM 26 F F2 EN6 . . . F 6 122.568 131.057 159.395 1 94.15 ? F2 EN6 401 R 1 HETATM 27 F F3 EN6 . . . F 6 121.08 132.227 158.472 1 94.15 ? F3 EN6 401 R 1 HETATM 28 C C18 EN6 . . . F 6 117.205 132.058 168.182 1 94.15 ? C18 EN6 401 R 1 HETATM 29 C C19 EN6 . . . F 6 117.322 132.752 166.904 1 94.15 ? C19 EN6 401 R 1 HETATM 30 N N2 EN6 . . . F 6 118.442 133.512 166.872 1 94.15 ? N2 EN6 401 R 1 HETATM 31 O O1 EN6 . . . F 6 120.121 131.666 170.265 1 94.15 ? O1 EN6 401 R 1 HETATM 32 O O2 EN6 . . . F 6 116.515 130.02 169.172 1 94.15 ? O2 EN6 401 R 1 HETATM 33 C C23 EN6 . . . F 6 113.874 132.446 168.185 1 94.15 ? C23 EN6 401 R 1 HETATM 34 O O3 EN6 . . . F 6 113.457 134.077 169.859 1 94.15 ? O3 EN6 401 R 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 34 #